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Comparing trunk/configure (file contents):
Revision 1373 by gezelter, Tue Oct 20 13:13:45 2009 UTC vs.
Revision 1395 by gezelter, Fri Dec 4 17:38:47 2009 UTC

# Line 1 | Line 1
1   #! /bin/sh
2   # Guess values for system-dependent variables and create Makefiles.
3 < # Generated by GNU Autoconf 2.64 for OOPSE 4.0.
3 > # Generated by GNU Autoconf 2.65 for OpenMD 1.0.
4   #
5   # Report bugs to <gezelter@nd.edu>.
6   #
7 + #
8   # Copyright (C) 1992, 1993, 1994, 1995, 1996, 1998, 1999, 2000, 2001,
9 < # 2002, 2003, 2004, 2005, 2006, 2007, 2008, 2009 Free Software
10 < # Foundation, Inc.
9 > # 2002, 2003, 2004, 2005, 2006, 2007, 2008, 2009 Free Software Foundation,
10 > # Inc.
11 > #
12   #
13   # This configure script is free software; the Free Software Foundation
14   # gives unlimited permission to copy, distribute and modify it.
# Line 527 | Line 529 | as_tr_sh="eval sed 'y%*+%pp%;s%[^_$as_cr_alnum]%_%g'"
529   as_tr_sh="eval sed 'y%*+%pp%;s%[^_$as_cr_alnum]%_%g'"
530  
531  
532 < exec 7<&0 </dev/null 6>&1
532 > test -n "$DJDIR" || exec 7<&0 </dev/null
533 > exec 6>&1
534  
535   # Name of the host.
536   # hostname on some systems (SVR3.2, Linux) returns a bogus exit status,
# Line 547 | Line 550 | MAKEFLAGS=
550   MAKEFLAGS=
551  
552   # Identity of this package.
553 < PACKAGE_NAME='OOPSE'
554 < PACKAGE_TARNAME='oopse'
555 < PACKAGE_VERSION='4.0'
556 < PACKAGE_STRING='OOPSE 4.0'
553 > PACKAGE_NAME='OpenMD'
554 > PACKAGE_TARNAME='openmd'
555 > PACKAGE_VERSION='1.0'
556 > PACKAGE_STRING='OpenMD 1.0'
557   PACKAGE_BUGREPORT='gezelter@nd.edu'
558   PACKAGE_URL=''
559  
560 < ac_unique_file="src/applications/oopse/oopse.cpp"
560 > ac_unique_file="src/applications/openmd/openmd.cpp"
561   ac_default_prefix="/usr/local"
562   # Factoring default headers for most tests.
563   ac_includes_default="\
# Line 594 | Line 597 | SUBDIRS
597  
598   ac_subst_vars='LTLIBOBJS
599   SUBDIRS
600 < OOPSE_HOME
601 < OOPSE
600 > OPENMD_HOME
601 > OPENMD
602   MKINSTALLDIRS
603   BATEXT
604   enable_latex_docs
# Line 604 | Line 607 | DOXYGEN
607   DOC
608   DOT
609   DOXYGEN
607 – USE_CGAL
608 – CGAL_LIBS
609 – CGAL_LDFLAGS
610 – CGAL_CPPFLAGS
611 – CGAL_CXXFLAGS
612 – CGAL_MAKEFILE
610   POW_LIB
611   LIBOBJS
612   USE_OPENBABEL
# Line 727 | Line 724 | enable_option_checking
724   ac_subst_files=''
725   ac_user_opts='
726   enable_option_checking
727 < enable_oopse_home
727 > enable_openmd_home
728   enable_debug
729   enable_single
730   enable_float
# Line 736 | Line 733 | with_openbabel
733   with_fftw
734   with_qhull
735   with_openbabel
739 – with_cgalmakefile
736   enable_doxygen
737   enable_dot
738   enable_html_docs
# Line 1301 | Line 1297 | if test "$ac_init_help" = "long"; then
1297    # Omit some internal or obsolete options to make the list less imposing.
1298    # This message is too long to be a string in the A/UX 3.1 sh.
1299    cat <<_ACEOF
1300 < \`configure' configures OOPSE 4.0 to adapt to many kinds of systems.
1300 > \`configure' configures OpenMD 1.0 to adapt to many kinds of systems.
1301  
1302   Usage: $0 [OPTION]... [VAR=VALUE]...
1303  
# Line 1349 | Line 1345 | Fine tuning of the installation directories:
1345    --infodir=DIR           info documentation [DATAROOTDIR/info]
1346    --localedir=DIR         locale-dependent data [DATAROOTDIR/locale]
1347    --mandir=DIR            man documentation [DATAROOTDIR/man]
1348 <  --docdir=DIR            documentation root [DATAROOTDIR/doc/oopse]
1348 >  --docdir=DIR            documentation root [DATAROOTDIR/doc/openmd]
1349    --htmldir=DIR           html documentation [DOCDIR]
1350    --dvidir=DIR            dvi documentation [DOCDIR]
1351    --pdfdir=DIR            pdf documentation [DOCDIR]
# Line 1366 | Line 1362 | if test -n "$ac_init_help"; then
1362  
1363   if test -n "$ac_init_help"; then
1364    case $ac_init_help in
1365 <     short | recursive ) echo "Configuration of OOPSE 4.0:";;
1365 >     short | recursive ) echo "Configuration of OpenMD 1.0:";;
1366     esac
1367    cat <<\_ACEOF
1368  
# Line 1374 | Line 1370 | Optional Features:
1370    --disable-option-checking  ignore unrecognized --enable/--with options
1371    --disable-FEATURE       do not include FEATURE (same as --enable-FEATURE=no)
1372    --enable-FEATURE[=ARG]  include FEATURE [ARG=yes]
1373 <  --enable-oopse-home=DIR      define oopse home dir PREFIX/oopse
1374 <  --enable-debug          Compile OOPSE in debug mode
1375 <  --enable-single         compile OOPSE in single precision
1373 >  --enable-openmd-home=DIR      define OpenMD home dir PREFIX/openmd
1374 >  --enable-debug          Compile OpenMD in debug mode
1375 >  --enable-single         compile OpenMD in single precision
1376    --enable-float          synonym for --enable-single
1377    --enable-doxygen        enable documentation generation with doxygen (auto)
1378    --enable-dot            use 'dot' to generate graphs in doxygen (auto)
# Line 1397 | Line 1393 | Optional Packages:
1393    --with-openbabel=DIR    root directory path of openbabel-2.x installation
1394                            (defaults to /usr/local or /usr if not found in
1395                            /usr/local)
1400 –  --with-cgalmakefile=makefile
1401 –                          Use the following CGAL makefile
1396  
1397   Some influential environment variables:
1398    CXX         C++ compiler command
# Line 1406 | Line 1400 | Some influential environment variables:
1400    LDFLAGS     linker flags, e.g. -L<lib dir> if you have libraries in a
1401                nonstandard directory <lib dir>
1402    LIBS        libraries to pass to the linker, e.g. -l<library>
1403 <  CPPFLAGS    C/C++/Objective C preprocessor flags, e.g. -I<include dir> if
1403 >  CPPFLAGS    (Objective) C/C++ preprocessor flags, e.g. -I<include dir> if
1404                you have headers in a nonstandard directory <include dir>
1405    MPICXX      MPI C++ compiler command
1406    CC          C compiler command
# Line 1484 | Line 1478 | if $ac_init_version; then
1478   test -n "$ac_init_help" && exit $ac_status
1479   if $ac_init_version; then
1480    cat <<\_ACEOF
1481 < OOPSE configure 4.0
1482 < generated by GNU Autoconf 2.64
1481 > OpenMD configure 1.0
1482 > generated by GNU Autoconf 2.65
1483  
1484   Copyright (C) 2009 Free Software Foundation, Inc.
1485   This configure script is free software; the Free Software Foundation
# Line 1532 | Line 1526 | fi
1526          ac_retval=1
1527   fi
1528    eval $as_lineno_stack; test "x$as_lineno_stack" = x && { as_lineno=; unset as_lineno;}
1529 <  return $ac_retval
1529 >  as_fn_set_status $ac_retval
1530  
1531   } # ac_fn_cxx_try_compile
1532  
# Line 1578 | Line 1572 | fi
1572    # left behind by Apple's compiler.  We do this before executing the actions.
1573    rm -rf conftest.dSYM conftest_ipa8_conftest.oo
1574    eval $as_lineno_stack; test "x$as_lineno_stack" = x && { as_lineno=; unset as_lineno;}
1575 <  return $ac_retval
1575 >  as_fn_set_status $ac_retval
1576  
1577   } # ac_fn_cxx_try_link
1578  
# Line 1683 | Line 1677 | fi
1677          ac_retval=1
1678   fi
1679    eval $as_lineno_stack; test "x$as_lineno_stack" = x && { as_lineno=; unset as_lineno;}
1680 <  return $ac_retval
1680 >  as_fn_set_status $ac_retval
1681  
1682   } # ac_fn_c_try_compile
1683  
# Line 1729 | Line 1723 | fi
1723    # left behind by Apple's compiler.  We do this before executing the actions.
1724    rm -rf conftest.dSYM conftest_ipa8_conftest.oo
1725    eval $as_lineno_stack; test "x$as_lineno_stack" = x && { as_lineno=; unset as_lineno;}
1726 <  return $ac_retval
1726 >  as_fn_set_status $ac_retval
1727  
1728   } # ac_fn_c_try_link
1729  
# Line 1834 | Line 1828 | fi
1828          ac_retval=1
1829   fi
1830    eval $as_lineno_stack; test "x$as_lineno_stack" = x && { as_lineno=; unset as_lineno;}
1831 <  return $ac_retval
1831 >  as_fn_set_status $ac_retval
1832  
1833   } # ac_fn_fc_try_compile
1834  
# Line 1880 | Line 1874 | fi
1874    # left behind by Apple's compiler.  We do this before executing the actions.
1875    rm -rf conftest.dSYM conftest_ipa8_conftest.oo
1876    eval $as_lineno_stack; test "x$as_lineno_stack" = x && { as_lineno=; unset as_lineno;}
1877 <  return $ac_retval
1877 >  as_fn_set_status $ac_retval
1878  
1879   } # ac_fn_fc_try_link
1880  
# Line 1917 | Line 1911 | fi
1911      ac_retval=1
1912   fi
1913    eval $as_lineno_stack; test "x$as_lineno_stack" = x && { as_lineno=; unset as_lineno;}
1914 <  return $ac_retval
1914 >  as_fn_set_status $ac_retval
1915  
1916   } # ac_fn_c_try_cpp
1917  
# Line 2052 | Line 2046 | fi
2046   fi
2047    rm -rf conftest.dSYM conftest_ipa8_conftest.oo
2048    eval $as_lineno_stack; test "x$as_lineno_stack" = x && { as_lineno=; unset as_lineno;}
2049 <  return $ac_retval
2049 >  as_fn_set_status $ac_retval
2050  
2051   } # ac_fn_c_try_run
2052  
# Line 2120 | Line 2114 | fi
2114      ac_retval=1
2115   fi
2116    eval $as_lineno_stack; test "x$as_lineno_stack" = x && { as_lineno=; unset as_lineno;}
2117 <  return $ac_retval
2117 >  as_fn_set_status $ac_retval
2118  
2119   } # ac_fn_cxx_try_cpp
2120  
# Line 2290 | Line 2284 | running configure, to aid debugging if configure makes
2284   This file contains any messages produced by compilers while
2285   running configure, to aid debugging if configure makes a mistake.
2286  
2287 < It was created by OOPSE $as_me 4.0, which was
2288 < generated by GNU Autoconf 2.64.  Invocation command line was
2287 > It was created by OpenMD $as_me 1.0, which was
2288 > generated by GNU Autoconf 2.65.  Invocation command line was
2289  
2290    $ $0 $@
2291  
# Line 2544 | Line 2538 | do
2538   for ac_site_file in "$ac_site_file1" "$ac_site_file2"
2539   do
2540    test "x$ac_site_file" = xNONE && continue
2541 <  if test -r "$ac_site_file"; then
2541 >  if test /dev/null != "$ac_site_file" && test -r "$ac_site_file"; then
2542      { $as_echo "$as_me:${as_lineno-$LINENO}: loading site script $ac_site_file" >&5
2543   $as_echo "$as_me: loading site script $ac_site_file" >&6;}
2544      sed 's/^/| /' "$ac_site_file" >&5
# Line 2553 | Line 2547 | if test -r "$cache_file"; then
2547   done
2548  
2549   if test -r "$cache_file"; then
2550 <  # Some versions of bash will fail to source /dev/null (special
2551 <  # files actually), so we avoid doing that.
2552 <  if test -f "$cache_file"; then
2550 >  # Some versions of bash will fail to source /dev/null (special files
2551 >  # actually), so we avoid doing that.  DJGPP emulates it as a regular file.
2552 >  if test /dev/null != "$cache_file" && test -f "$cache_file"; then
2553      { $as_echo "$as_me:${as_lineno-$LINENO}: loading cache $cache_file" >&5
2554   $as_echo "$as_me: loading cache $cache_file" >&6;}
2555      case $cache_file in
# Line 2902 | Line 2896 | ac_config_headers="$ac_config_headers src/config.h"
2896  
2897  
2898  
2905 –
2906 –
2907 –
2908 –
2909 –
2910 –
2911 –
2912 –
2913 –
2914 –
2915 –
2916 –
2917 –
2918 –
2919 –
2920 –
2921 –
2922 –
2923 –
2924 –
2925 –
2926 – # This is taken from http://autoqt.sourceforge.net/
2927 – # Copyright (c) 2002, Geoffrey Wossum
2928 – # All rights reserved.
2929 –
2930 – # Redistribution and use in source and binary forms, with or without
2931 – # modification, are permitted provided that the following conditions are
2932 – # met:
2933 –
2934 – #  - Redistributions of source code must retain the above copyright notice,
2935 – #    this list of conditions and the following disclaimer.
2936 –
2937 – #  - Redistributions in binary form must reproduce the above copyright
2938 – #    notice, this list of conditions and the following disclaimer in the
2939 – #    documentation and/or other materials provided with the distribution.
2940 –
2941 – #  - Neither the name of Geoffrey Wossum nor the names of its
2942 – #    contributors may be used to endorse or promote products derived from
2943 – #    this software without specific prior written permission.
2944 –
2945 –
2946 – # THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
2947 – # "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED
2948 – # TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
2949 – # PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER OR
2950 – # CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
2951 – # EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
2952 – # PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
2953 – # OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
2954 – # WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
2955 – # OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
2956 – # ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
2957 –
2958 –
2959 – # Check for Qt compiler flags, linker flags, and binary packages
2960 –
2961 –
2962 –
2899   # who am i
2900   # Make sure we can run config.sub.
2901   $SHELL "$ac_aux_dir/config.sub" sun4 >/dev/null 2>&1 ||
# Line 3036 | Line 2972 | case $host_os in *\ *) host_os=`echo "$host_os" | sed
2972  
2973  
2974   # set program name
2975 < PROGNAME="oopse"
2975 > PROGNAME="openmd"
2976  
2977  
2978  
2979  
2980   OBJEXT=".$OBJEXT"
2981  
2982 < OOPSE=oopse
2982 > OPENMD=openmd
2983  
2984   if test "x${prefix}" = "xNONE"
2985   then
2986 <  OOPSE_HOME=${ac_default_prefix}/oopse
2986 >  OPENMD_HOME=${ac_default_prefix}/openmd
2987   else
2988 <  OOPSE_HOME=${prefix}/oopse
2988 >  OPENMD_HOME=${prefix}/openmd
2989   fi
2990 < # Check whether --enable-oopse-home was given.
2991 < if test "${enable_oopse_home+set}" = set; then :
2992 <  enableval=$enable_oopse_home; OOPSE_HOME="${enableval}"
2990 > # Check whether --enable-openmd-home was given.
2991 > if test "${enable_openmd_home+set}" = set; then :
2992 >  enableval=$enable_openmd_home; OPENMD_HOME="${enableval}"
2993   fi
2994  
2995  
# Line 3405 | Line 3341 | fi
3341       as_fn_error "Can't find path to user-specified Fortran compiler $FC" "$LINENO" 5
3342   fi
3343   fi
3344 +
3345  
3346 + save_LIBS_CHECK_CXX_LIB="$LIBS"
3347  
3348   ac_ext=cpp
3349   ac_cpp='$CXXCPP $CPPFLAGS'
# Line 3543 | Line 3481 | $as_echo "$ac_try_echo"; } >&5
3481   ... rest of stderr output deleted ...
3482           10q' conftest.err >conftest.er1
3483      cat conftest.er1 >&5
3546 –    rm -f conftest.er1 conftest.err
3484    fi
3485 +  rm -f conftest.er1 conftest.err
3486    $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
3487    test $ac_status = 0; }
3488   done
3489  
3490   cat confdefs.h - <<_ACEOF >conftest.$ac_ext
3491   /* end confdefs.h.  */
3492 < #include <stdio.h>
3492 >
3493   int
3494   main ()
3495   {
3558 – FILE *f = fopen ("conftest.out", "w");
3559 – return ferror (f) || fclose (f) != 0;
3496  
3497    ;
3498    return 0;
3499   }
3500   _ACEOF
3501   ac_clean_files_save=$ac_clean_files
3502 < ac_clean_files="$ac_clean_files a.out a.out.dSYM a.exe b.out conftest.out"
3502 > ac_clean_files="$ac_clean_files a.out a.out.dSYM a.exe b.out"
3503   # Try to create an executable without -o first, disregard a.out.
3504   # It will help us diagnose broken compilers, and finding out an intuition
3505   # of exeext.
3506 < { $as_echo "$as_me:${as_lineno-$LINENO}: checking for C++ compiler default output file name" >&5
3507 < $as_echo_n "checking for C++ compiler default output file name... " >&6; }
3506 > { $as_echo "$as_me:${as_lineno-$LINENO}: checking whether the C++ compiler works" >&5
3507 > $as_echo_n "checking whether the C++ compiler works... " >&6; }
3508   ac_link_default=`$as_echo "$ac_link" | sed 's/ -o *conftest[^ ]*//'`
3509  
3510   # The possible output files:
# Line 3630 | Line 3566 | fi
3566   else
3567    ac_file=''
3568   fi
3633 – { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_file" >&5
3634 – $as_echo "$ac_file" >&6; }
3569   if test -z "$ac_file"; then :
3570 <  $as_echo "$as_me: failed program was:" >&5
3570 >  { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
3571 > $as_echo "no" >&6; }
3572 > $as_echo "$as_me: failed program was:" >&5
3573   sed 's/^/| /' conftest.$ac_ext >&5
3574  
3575   { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
# Line 3641 | Line 3577 | See \`config.log' for more details." "$LINENO" 5; }; }
3577   { as_fn_set_status 77
3578   as_fn_error "C++ compiler cannot create executables
3579   See \`config.log' for more details." "$LINENO" 5; }; }
3580 + else
3581 +  { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
3582 + $as_echo "yes" >&6; }
3583   fi
3584 + { $as_echo "$as_me:${as_lineno-$LINENO}: checking for C++ compiler default output file name" >&5
3585 + $as_echo_n "checking for C++ compiler default output file name... " >&6; }
3586 + { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_file" >&5
3587 + $as_echo "$ac_file" >&6; }
3588   ac_exeext=$ac_cv_exeext
3589  
3590 < # Check that the compiler produces executables we can run.  If not, either
3648 < # the compiler is broken, or we cross compile.
3649 < { $as_echo "$as_me:${as_lineno-$LINENO}: checking whether the C++ compiler works" >&5
3650 < $as_echo_n "checking whether the C++ compiler works... " >&6; }
3651 < # If not cross compiling, check that we can run a simple program.
3652 < if test "$cross_compiling" != yes; then
3653 <  if { ac_try='./$ac_file'
3654 <  { { case "(($ac_try" in
3655 <  *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
3656 <  *) ac_try_echo=$ac_try;;
3657 < esac
3658 < eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\""
3659 < $as_echo "$ac_try_echo"; } >&5
3660 <  (eval "$ac_try") 2>&5
3661 <  ac_status=$?
3662 <  $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
3663 <  test $ac_status = 0; }; }; then
3664 <    cross_compiling=no
3665 <  else
3666 <    if test "$cross_compiling" = maybe; then
3667 <        cross_compiling=yes
3668 <    else
3669 <        { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
3670 < $as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
3671 < as_fn_error "cannot run C++ compiled programs.
3672 < If you meant to cross compile, use \`--host'.
3673 < See \`config.log' for more details." "$LINENO" 5; }
3674 <    fi
3675 <  fi
3676 < fi
3677 < { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
3678 < $as_echo "yes" >&6; }
3679 <
3680 < rm -f -r a.out a.out.dSYM a.exe conftest$ac_cv_exeext b.out conftest.out
3590 > rm -f -r a.out a.out.dSYM a.exe conftest$ac_cv_exeext b.out
3591   ac_clean_files=$ac_clean_files_save
3682 – # Check that the compiler produces executables we can run.  If not, either
3683 – # the compiler is broken, or we cross compile.
3684 – { $as_echo "$as_me:${as_lineno-$LINENO}: checking whether we are cross compiling" >&5
3685 – $as_echo_n "checking whether we are cross compiling... " >&6; }
3686 – { $as_echo "$as_me:${as_lineno-$LINENO}: result: $cross_compiling" >&5
3687 – $as_echo "$cross_compiling" >&6; }
3688 –
3592   { $as_echo "$as_me:${as_lineno-$LINENO}: checking for suffix of executables" >&5
3593   $as_echo_n "checking for suffix of executables... " >&6; }
3594   if { { ac_try="$ac_link"
# Line 3718 | Line 3621 | fi
3621   as_fn_error "cannot compute suffix of executables: cannot compile and link
3622   See \`config.log' for more details." "$LINENO" 5; }
3623   fi
3624 < rm -f conftest$ac_cv_exeext
3624 > rm -f conftest conftest$ac_cv_exeext
3625   { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_exeext" >&5
3626   $as_echo "$ac_cv_exeext" >&6; }
3627  
3628   rm -f conftest.$ac_ext
3629   EXEEXT=$ac_cv_exeext
3630   ac_exeext=$EXEEXT
3631 + cat confdefs.h - <<_ACEOF >conftest.$ac_ext
3632 + /* end confdefs.h.  */
3633 + #include <stdio.h>
3634 + int
3635 + main ()
3636 + {
3637 + FILE *f = fopen ("conftest.out", "w");
3638 + return ferror (f) || fclose (f) != 0;
3639 +
3640 +  ;
3641 +  return 0;
3642 + }
3643 + _ACEOF
3644 + ac_clean_files="$ac_clean_files conftest.out"
3645 + # Check that the compiler produces executables we can run.  If not, either
3646 + # the compiler is broken, or we cross compile.
3647 + { $as_echo "$as_me:${as_lineno-$LINENO}: checking whether we are cross compiling" >&5
3648 + $as_echo_n "checking whether we are cross compiling... " >&6; }
3649 + if test "$cross_compiling" != yes; then
3650 +  { { ac_try="$ac_link"
3651 + case "(($ac_try" in
3652 +  *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
3653 +  *) ac_try_echo=$ac_try;;
3654 + esac
3655 + eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\""
3656 + $as_echo "$ac_try_echo"; } >&5
3657 +  (eval "$ac_link") 2>&5
3658 +  ac_status=$?
3659 +  $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
3660 +  test $ac_status = 0; }
3661 +  if { ac_try='./conftest$ac_cv_exeext'
3662 +  { { case "(($ac_try" in
3663 +  *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
3664 +  *) ac_try_echo=$ac_try;;
3665 + esac
3666 + eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\""
3667 + $as_echo "$ac_try_echo"; } >&5
3668 +  (eval "$ac_try") 2>&5
3669 +  ac_status=$?
3670 +  $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
3671 +  test $ac_status = 0; }; }; then
3672 +    cross_compiling=no
3673 +  else
3674 +    if test "$cross_compiling" = maybe; then
3675 +        cross_compiling=yes
3676 +    else
3677 +        { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
3678 + $as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
3679 + as_fn_error "cannot run C++ compiled programs.
3680 + If you meant to cross compile, use \`--host'.
3681 + See \`config.log' for more details." "$LINENO" 5; }
3682 +    fi
3683 +  fi
3684 + fi
3685 + { $as_echo "$as_me:${as_lineno-$LINENO}: result: $cross_compiling" >&5
3686 + $as_echo "$cross_compiling" >&6; }
3687 +
3688 + rm -f conftest.$ac_ext conftest$ac_cv_exeext conftest.out
3689 + ac_clean_files=$ac_clean_files_save
3690   { $as_echo "$as_me:${as_lineno-$LINENO}: checking for suffix of object files" >&5
3691   $as_echo_n "checking for suffix of object files... " >&6; }
3692   if test "${ac_cv_objext+set}" = set; then :
# Line 4076 | Line 4038 | if test x = x"$MPILIBS"; then
4038   # Finally, execute ACTION-IF-FOUND/ACTION-IF-NOT-FOUND:
4039   if test x = x"$MPILIBS"; then
4040          USE_MPI="no"
4041 <       { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: No suitable C++ MPI implementation found. oopse_MPI will not be built." >&5
4042 < $as_echo "$as_me: WARNING: No suitable C++ MPI implementation found. oopse_MPI will not be built." >&2;}
4041 >       { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: No suitable C++ MPI implementation found. openmd_MPI will not be built." >&5
4042 > $as_echo "$as_me: WARNING: No suitable C++ MPI implementation found. openmd_MPI will not be built." >&2;}
4043          :
4044   else
4045          USE_MPI="yes"
# Line 4406 | Line 4368 | $as_echo "$ac_try_echo"; } >&5
4368   ... rest of stderr output deleted ...
4369           10q' conftest.err >conftest.er1
4370      cat conftest.er1 >&5
4409 –    rm -f conftest.er1 conftest.err
4371    fi
4372 +  rm -f conftest.er1 conftest.err
4373    $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
4374    test $ac_status = 0; }
4375   done
# Line 4811 | Line 4773 | if test x = x"$MPILIBS"; then
4773   # Finally, execute ACTION-IF-FOUND/ACTION-IF-NOT-FOUND:
4774   if test x = x"$MPILIBS"; then
4775          USE_MPI="no"
4776 <       { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: No suitable C MPI implementation found. oopse_MPI will not be built." >&5
4777 < $as_echo "$as_me: WARNING: No suitable C MPI implementation found. oopse_MPI will not be built." >&2;}
4776 >       { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: No suitable C MPI implementation found. openmd_MPI will not be built." >&5
4777 > $as_echo "$as_me: WARNING: No suitable C MPI implementation found. openmd_MPI will not be built." >&2;}
4778          :
4779   else
4780          USE_MPI="yes"
# Line 4945 | Line 4907 | $as_echo "$ac_try_echo"; } >&5
4907   ... rest of stderr output deleted ...
4908           10q' conftest.err >conftest.er1
4909      cat conftest.er1 >&5
4948 –    rm -f conftest.er1 conftest.err
4910    fi
4911 +  rm -f conftest.er1 conftest.err
4912    $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
4913    test $ac_status = 0; }
4914   done
# Line 5251 | Line 5213 | if test x = x"$MPILIBS"; then
5213   # Finally, execute ACTION-IF-FOUND/ACTION-IF-NOT-FOUND:
5214   if test x = x"$MPILIBS"; then
5215          USE_MPI="no"
5216 <       { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: No suitable Fortran MPI implementation found. oopse_MPI will not be built." >&5
5217 < $as_echo "$as_me: WARNING: No suitable Fortran MPI implementation found. oopse_MPI will not be built." >&2;}
5216 >       { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: No suitable Fortran MPI implementation found. openmd_MPI will not be built." >&5
5217 > $as_echo "$as_me: WARNING: No suitable Fortran MPI implementation found. openmd_MPI will not be built." >&2;}
5218          :
5219   else
5220          USE_MPI="yes"
# Line 5401 | Line 5363 | $as_echo "$ac_try_echo"; } >&5
5363   ... rest of stderr output deleted ...
5364           10q' conftest.err >conftest.er1
5365      cat conftest.er1 >&5
5404 –    rm -f conftest.er1 conftest.err
5366    fi
5367 +  rm -f conftest.er1 conftest.err
5368    $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
5369    test $ac_status = 0; }
5370   done
# Line 5657 | Line 5619 | $as_echo "$ac_try_echo"; } >&5
5619   ... rest of stderr output deleted ...
5620           10q' conftest.err >conftest.er1
5621      cat conftest.er1 >&5
5660 –    rm -f conftest.er1 conftest.err
5622    fi
5623 +  rm -f conftest.er1 conftest.err
5624    $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
5625    test $ac_status = 0; }
5626   done
# Line 5998 | Line 5960 | $as_echo "$ac_try_echo"; } >&5
5960   ... rest of stderr output deleted ...
5961           10q' conftest.err >conftest.er1
5962      cat conftest.er1 >&5
6001 –    rm -f conftest.er1 conftest.err
5963    fi
5964 +  rm -f conftest.er1 conftest.err
5965    $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
5966    test $ac_status = 0; }
5967   done
# Line 6696 | Line 6658 | esac
6658     x/*) ;;
6659     *) INSTALL=`pwd`/ac-tools/"shtool install -c" ;
6660   esac
6661 < MKINSTALLDIRS=`pwd`/ac-tools/"shtool mkdir -p -f"
6661 > MKINSTALLDIRS=`pwd`/ac-tools/"shtool mkdir -p -f -m 755"
6662   # Extract the first word of "ar", so it can be a program name with args.
6663   set dummy ar; ac_word=$2
6664   { $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
# Line 8734 | Line 8696 | $as_echo "failed" >&6; }
8696                  echo ""
8697                  echo "*********************************************************"
8698                  echo "* WARNING: Could not find a working zlib installation   *"
8699 <                echo "* If you need OOPSE to be able to deal with compressed  *"
8699 >                echo "* If you need OpenMD to be able to deal with compressed *"
8700                  echo "* trajectory dump files be sure to specify a valid zlib *"
8701                  echo "* installation with --with-zlib=DIR                     *"
8702                  echo "*                                                       *"
8703 <                echo "* OOPSE will still work without zlib installed.         *"
8703 >                echo "* OpenMD will still work without zlib installed.        *"
8704                  echo "*********************************************************"
8705                  echo ""
8706          fi
# Line 9010 | Line 8972 | $as_echo "failed" >&6; }
8972              echo "* compute undulation spectra, be sure to specify a      *"
8973              echo "* valid fftw installation with --with-fftw=DIR          *"
8974              echo "*                                                       *"
8975 <            echo "* OOPSE will still work without fftw installed.         *"
8975 >            echo "* OpenMD will still work without fftw installed.        *"
8976              echo "*********************************************************"
8977              echo ""
8978            fi
# Line 9157 | Line 9119 | $as_echo "$as_me: WARNING: Could not find a working qh
9119   $as_echo "$as_me: WARNING: " >&2;}
9120             { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: Could not find a working qhull installation" >&5
9121   $as_echo "$as_me: WARNING: Could not find a working qhull installation" >&2;}
9122 <           { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: If you need OOPSE to be able to deal with convex    " >&5
9123 < $as_echo "$as_me: WARNING: If you need OOPSE to be able to deal with convex    " >&2;}
9122 >           { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: If you need OpenMD to be able to deal with convex    " >&5
9123 > $as_echo "$as_me: WARNING: If you need OpenMD to be able to deal with convex    " >&2;}
9124             { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: hulls be sure to specify a valid qhull installation " >&5
9125   $as_echo "$as_me: WARNING: hulls be sure to specify a valid qhull installation " >&2;}
9126             { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: with --with-qhull=DIR                               " >&5
9127   $as_echo "$as_me: WARNING: with --with-qhull=DIR                               " >&2;}
9128             { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: " >&5
9129   $as_echo "$as_me: WARNING: " >&2;}
9130 <           { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: OOPSE will still work without qhull installed.      " >&5
9131 < $as_echo "$as_me: WARNING: OOPSE will still work without qhull installed.      " >&2;}
9130 >           { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: OpenMD will still work without qhull installed.      " >&5
9131 > $as_echo "$as_me: WARNING: OpenMD will still work without qhull installed.      " >&2;}
9132             { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: " >&5
9133   $as_echo "$as_me: WARNING: " >&2;}
9134          fi
# Line 9440 | Line 9402 | $as_echo "failed" >&6; }
9402                  echo ""
9403                  echo "*********************************************************"
9404                  echo "* WARNING: Could not find a working openbabel-2.x       *"
9405 <                echo "* installation If you need OOPSE to be able to convert  *"
9405 >                echo "* installation If you need OpenMD to be able to convert *"
9406                  echo "* xyz or pdb files you need to specify a valid          *"
9407                  echo "* openbabel-2.x installation with --with-openbabel=DIR  *"
9408                  echo "*                                                       *"
9409 <                echo "* OOPSE will still work without openbabel installed.    *"
9409 >                echo "* OpenMD will still work without openbabel installed.   *"
9410                  echo "*********************************************************"
9411                  echo ""
9412          fi
# Line 10702 | Line 10664 | fi
10664   fi
10665  
10666       ;;
10705 – esac
10706 –
10707 –
10708 – acx_cgal_found=no
10709 –
10710 – # Check whether --with-cgalmakefile was given.
10711 – if test "${with_cgalmakefile+set}" = set; then :
10712 –  withval=$with_cgalmakefile;
10713 – fi
10714 –
10715 – case $with_cgalmakefile in
10716 –        yes | "") ;;
10717 –        no) acx_cgal_found=disable ;;
10718 –        -* | */* | *.a | *.so | *.so.* | *.o) CGAL_MAKEFILE="$with_cgalmakefile" ;;
10719 –        *) CGAL_MAKEFILE="$with_cgalmakefile" ;;
10667   esac
10721 –
10722 – if test "$acx_cgal_found" == no; then
10723 –    { $as_echo "$as_me:${as_lineno-$LINENO}: checking CGAL_MAKEFILE" >&5
10724 – $as_echo_n "checking CGAL_MAKEFILE... " >&6; }
10725 –
10726 –    if test \! -z "$CGAL_MAKEFILE"; then
10727 –
10728 –        if test -e "$CGAL_MAKEFILE"; then
10729 –            tname=`mktemp /tmp/cgal_makefile_dsrXXXXXX`
10730 –
10731 – cat > $tname << _ACEOF
10732 – include $CGAL_MAKEFILE
10733 –
10734 – cppflags:
10735 –        @echo \$(CGAL_CXXFLAGS)
10736 –
10737 – cxxflags:
10738 –        @echo
10739 – ldflags:
10740 –        @echo \$(CGAL_LDFLAGS)
10741 – _ACEOF
10742 –            CGAL_CPPFLAGS="`make -s -f $tname cppflags`"
10743 –            CGAL_CXXFLAGS="`make -s -f $tname cxxflags`"
10744 –            CGAL_LDFLAGST="`make -s -f $tname ldflags`"
10745 –            for i in $CGAL_LDFLAGST; do
10746 –                if test `echo $i| grep -c ^-l`; then
10747 –                    CGAL_LIBS="$CGAL_LIBS $i"
10748 –                else
10749 –                    CGAL_LDFLAGS="$CGAL_LDFLAGS $i"
10750 –                fi
10751 –            done
10752 –            rm -f $tname
10753 –            { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
10754 – $as_echo "yes" >&6; }
10755 –            acx_cgal_found=yes
10756 –                                   else
10757 –            { $as_echo "$as_me:${as_lineno-$LINENO}: result: invalid" >&5
10758 – $as_echo "invalid" >&6; }
10759 –            as_fn_error "CGAL_MAKEFILE defined, but the makefile does not exist." "$LINENO" 5
10760 –        fi
10761 –    else
10762 –        { $as_echo "$as_me:${as_lineno-$LINENO}: result: not defined" >&5
10763 – $as_echo "not defined" >&6; }
10764 –    fi
10765 – fi
10668  
10767 – if test "$acx_cgal_found" == no; then
10768 –        ac_fn_c_check_header_mongrel "$LINENO" "CGAL/Exact_predicates_inexact_constructions_kernel.h" "ac_cv_header_CGAL_Exact_predicates_inexact_constructions_kernel_h" "$ac_includes_default"
10769 – if test "x$ac_cv_header_CGAL_Exact_predicates_inexact_constructions_kernel_h" = x""yes; then :
10770 –  cgal_have_header=yes
10771 – else
10772 –  cgal_have_header=no
10773 – fi
10669  
10775 –
10776 –        if test "$cgal_have_header" == yes; then
10777 –                { $as_echo "$as_me:${as_lineno-$LINENO}: checking for main in -lCGAL" >&5
10778 – $as_echo_n "checking for main in -lCGAL... " >&6; }
10779 – if test "${ac_cv_lib_CGAL_main+set}" = set; then :
10780 –  $as_echo_n "(cached) " >&6
10781 – else
10782 –  ac_check_lib_save_LIBS=$LIBS
10783 – LIBS="-lCGAL  $LIBS"
10784 – cat confdefs.h - <<_ACEOF >conftest.$ac_ext
10785 – /* end confdefs.h.  */
10786 –
10787 –
10788 – #ifdef FC_DUMMY_MAIN
10789 – #ifndef FC_DUMMY_MAIN_EQ_F77
10790 – #  ifdef __cplusplus
10791 –     extern "C"
10792 – #  endif
10793 –   int FC_DUMMY_MAIN() { return 1; }
10794 – #endif
10795 – #endif
10796 – int
10797 – main ()
10798 – {
10799 – return main ();
10800 –  ;
10801 –  return 0;
10802 – }
10803 – _ACEOF
10804 – if ac_fn_c_try_link "$LINENO"; then :
10805 –  ac_cv_lib_CGAL_main=yes
10806 – else
10807 –  ac_cv_lib_CGAL_main=no
10808 – fi
10809 – rm -f core conftest.err conftest.$ac_objext \
10810 –    conftest$ac_exeext conftest.$ac_ext
10811 – LIBS=$ac_check_lib_save_LIBS
10812 – fi
10813 – { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_CGAL_main" >&5
10814 – $as_echo "$ac_cv_lib_CGAL_main" >&6; }
10815 – if test "x$ac_cv_lib_CGAL_main" = x""yes; then :
10816 –  cgal_have_lib=yes
10817 – else
10818 –  cgal_have_lib=no
10819 – fi
10820 –
10821 –                if test "$cgal_have_lib" == no; then
10822 –                        save_LIBS="$LIBS"; LIBS="$LIBS -lgmp -lmpfr -lm"
10823 –                        { $as_echo "$as_me:${as_lineno-$LINENO}: checking for main in -lCGAL" >&5
10824 – $as_echo_n "checking for main in -lCGAL... " >&6; }
10825 – if test "${ac_cv_lib_CGAL_main+set}" = set; then :
10826 –  $as_echo_n "(cached) " >&6
10827 – else
10828 –  ac_check_lib_save_LIBS=$LIBS
10829 – LIBS="-lCGAL  $LIBS"
10830 – cat confdefs.h - <<_ACEOF >conftest.$ac_ext
10831 – /* end confdefs.h.  */
10832 –
10833 –
10834 – #ifdef FC_DUMMY_MAIN
10835 – #ifndef FC_DUMMY_MAIN_EQ_F77
10836 – #  ifdef __cplusplus
10837 –     extern "C"
10838 – #  endif
10839 –   int FC_DUMMY_MAIN() { return 1; }
10840 – #endif
10841 – #endif
10842 – int
10843 – main ()
10844 – {
10845 – return main ();
10846 –  ;
10847 –  return 0;
10848 – }
10849 – _ACEOF
10850 – if ac_fn_c_try_link "$LINENO"; then :
10851 –  ac_cv_lib_CGAL_main=yes
10852 – else
10853 –  ac_cv_lib_CGAL_main=no
10854 – fi
10855 – rm -f core conftest.err conftest.$ac_objext \
10856 –    conftest$ac_exeext conftest.$ac_ext
10857 – LIBS=$ac_check_lib_save_LIBS
10858 – fi
10859 – { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_CGAL_main" >&5
10860 – $as_echo "$ac_cv_lib_CGAL_main" >&6; }
10861 – if test "x$ac_cv_lib_CGAL_main" = x""yes; then :
10862 –  CGAL_LIBS="-lCGAL -lgmp -lmpfr"
10863 –                                                  cgal_have_lib=yes
10864 – else
10865 –  cgal_have_lib=no
10866 – fi
10867 –
10868 –                        LIBS="$save_LIBS"
10869 –                else
10870 –                        CGAL_LIBS="-lCGAL"
10871 –                        { $as_echo "$as_me:${as_lineno-$LINENO}: checking for main in -lmpfr" >&5
10872 – $as_echo_n "checking for main in -lmpfr... " >&6; }
10873 – if test "${ac_cv_lib_mpfr_main+set}" = set; then :
10874 –  $as_echo_n "(cached) " >&6
10875 – else
10876 –  ac_check_lib_save_LIBS=$LIBS
10877 – LIBS="-lmpfr  $LIBS"
10878 – cat confdefs.h - <<_ACEOF >conftest.$ac_ext
10879 – /* end confdefs.h.  */
10880 –
10881 –
10882 – #ifdef FC_DUMMY_MAIN
10883 – #ifndef FC_DUMMY_MAIN_EQ_F77
10884 – #  ifdef __cplusplus
10885 –     extern "C"
10886 – #  endif
10887 –   int FC_DUMMY_MAIN() { return 1; }
10888 – #endif
10889 – #endif
10890 – int
10891 – main ()
10892 – {
10893 – return main ();
10894 –  ;
10895 –  return 0;
10896 – }
10897 – _ACEOF
10898 – if ac_fn_c_try_link "$LINENO"; then :
10899 –  ac_cv_lib_mpfr_main=yes
10900 – else
10901 –  ac_cv_lib_mpfr_main=no
10902 – fi
10903 – rm -f core conftest.err conftest.$ac_objext \
10904 –    conftest$ac_exeext conftest.$ac_ext
10905 – LIBS=$ac_check_lib_save_LIBS
10906 – fi
10907 – { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_mpfr_main" >&5
10908 – $as_echo "$ac_cv_lib_mpfr_main" >&6; }
10909 – if test "x$ac_cv_lib_mpfr_main" = x""yes; then :
10910 –  CGAL_LIBS="$CGAL_LIBS -lmpfr"
10911 – fi
10912 –
10913 –                        { $as_echo "$as_me:${as_lineno-$LINENO}: checking for main in -lgmp" >&5
10914 – $as_echo_n "checking for main in -lgmp... " >&6; }
10915 – if test "${ac_cv_lib_gmp_main+set}" = set; then :
10916 –  $as_echo_n "(cached) " >&6
10917 – else
10918 –  ac_check_lib_save_LIBS=$LIBS
10919 – LIBS="-lgmp  $LIBS"
10920 – cat confdefs.h - <<_ACEOF >conftest.$ac_ext
10921 – /* end confdefs.h.  */
10922 –
10923 –
10924 – #ifdef FC_DUMMY_MAIN
10925 – #ifndef FC_DUMMY_MAIN_EQ_F77
10926 – #  ifdef __cplusplus
10927 –     extern "C"
10928 – #  endif
10929 –   int FC_DUMMY_MAIN() { return 1; }
10930 – #endif
10931 – #endif
10932 – int
10933 – main ()
10934 – {
10935 – return main ();
10936 –  ;
10937 –  return 0;
10938 – }
10939 – _ACEOF
10940 – if ac_fn_c_try_link "$LINENO"; then :
10941 –  ac_cv_lib_gmp_main=yes
10942 – else
10943 –  ac_cv_lib_gmp_main=no
10944 – fi
10945 – rm -f core conftest.err conftest.$ac_objext \
10946 –    conftest$ac_exeext conftest.$ac_ext
10947 – LIBS=$ac_check_lib_save_LIBS
10948 – fi
10949 – { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_gmp_main" >&5
10950 – $as_echo "$ac_cv_lib_gmp_main" >&6; }
10951 – if test "x$ac_cv_lib_gmp_main" = x""yes; then :
10952 –  CGAL_LIBS="$CGAL_LIBS -lgmp"
10953 – fi
10954 –
10955 –                        { $as_echo "$as_me:${as_lineno-$LINENO}: checking for main in -lgmpxx" >&5
10956 – $as_echo_n "checking for main in -lgmpxx... " >&6; }
10957 – if test "${ac_cv_lib_gmpxx_main+set}" = set; then :
10958 –  $as_echo_n "(cached) " >&6
10959 – else
10960 –  ac_check_lib_save_LIBS=$LIBS
10961 – LIBS="-lgmpxx  $LIBS"
10962 – cat confdefs.h - <<_ACEOF >conftest.$ac_ext
10963 – /* end confdefs.h.  */
10964 –
10965 –
10966 – #ifdef FC_DUMMY_MAIN
10967 – #ifndef FC_DUMMY_MAIN_EQ_F77
10968 – #  ifdef __cplusplus
10969 –     extern "C"
10970 – #  endif
10971 –   int FC_DUMMY_MAIN() { return 1; }
10972 – #endif
10973 – #endif
10974 – int
10975 – main ()
10976 – {
10977 – return main ();
10978 –  ;
10979 –  return 0;
10980 – }
10981 – _ACEOF
10982 – if ac_fn_c_try_link "$LINENO"; then :
10983 –  ac_cv_lib_gmpxx_main=yes
10984 – else
10985 –  ac_cv_lib_gmpxx_main=no
10986 – fi
10987 – rm -f core conftest.err conftest.$ac_objext \
10988 –    conftest$ac_exeext conftest.$ac_ext
10989 – LIBS=$ac_check_lib_save_LIBS
10990 – fi
10991 – { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_gmpxx_main" >&5
10992 – $as_echo "$ac_cv_lib_gmpxx_main" >&6; }
10993 – if test "x$ac_cv_lib_gmpxx_main" = x""yes; then :
10994 –  CGAL_LIBS="$CGAL_LIBS -lgmpxx"
10995 – fi
10996 –
10997 –                fi
10998 –
10999 –                if test "$cgal_have_lib" == yes; then
11000 –                        acx_cgal_found=yes
11001 –                fi
11002 –        fi
11003 –        if test "$acx_cgal_found" == yes; then
11004 –                { $as_echo "$as_me:${as_lineno-$LINENO}: checking for main in -lCore" >&5
11005 – $as_echo_n "checking for main in -lCore... " >&6; }
11006 – if test "${ac_cv_lib_Core_main+set}" = set; then :
11007 –  $as_echo_n "(cached) " >&6
11008 – else
11009 –  ac_check_lib_save_LIBS=$LIBS
11010 – LIBS="-lCore  $LIBS"
11011 – cat confdefs.h - <<_ACEOF >conftest.$ac_ext
11012 – /* end confdefs.h.  */
11013 –
11014 –
11015 – #ifdef FC_DUMMY_MAIN
11016 – #ifndef FC_DUMMY_MAIN_EQ_F77
11017 – #  ifdef __cplusplus
11018 –     extern "C"
11019 – #  endif
11020 –   int FC_DUMMY_MAIN() { return 1; }
11021 – #endif
11022 – #endif
11023 – int
11024 – main ()
11025 – {
11026 – return main ();
11027 –  ;
11028 –  return 0;
11029 – }
11030 – _ACEOF
11031 – if ac_fn_c_try_link "$LINENO"; then :
11032 –  ac_cv_lib_Core_main=yes
11033 – else
11034 –  ac_cv_lib_Core_main=no
11035 – fi
11036 – rm -f core conftest.err conftest.$ac_objext \
11037 –    conftest$ac_exeext conftest.$ac_ext
11038 – LIBS=$ac_check_lib_save_LIBS
11039 – fi
11040 – { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_Core_main" >&5
11041 – $as_echo "$ac_cv_lib_Core_main" >&6; }
11042 – if test "x$ac_cv_lib_Core_main" = x""yes; then :
11043 –  CGAL_LIBS="$CGAL_LIBS -lCore"
11044 – fi
11045 –
11046 –        fi
11047 – fi
11048 –
11049 –
11050 –
11051 – { $as_echo "$as_me:${as_lineno-$LINENO}: checking CGAL" >&5
11052 – $as_echo_n "checking CGAL... " >&6; }
11053 –
11054 –
11055 –
11056 –
11057 –
11058 – if test "$acx_cgal_found" == yes; then
11059 –        { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
11060 – $as_echo "yes" >&6; }
11061 –
11062 – else
11063 –        { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
11064 – $as_echo "no" >&6; }
11065 –
11066 – fi
11067 – USE_CGAL=no
11068 – if test "$acx_cgal_found" == yes; then
11069 –        USE_CGAL=yes
11070 –
11071 – $as_echo "#define HAVE_CGAL 1" >>confdefs.h
11072 –
11073 –
11074 –
11075 –
11076 –
11077 – fi
11078 –
11079 –
11080 –
11081 –
10670   # Check whether --enable-doxygen was given.
10671   if test "${enable_doxygen+set}" = set; then :
10672    enableval=$enable_doxygen;
# Line 11738 | Line 11326 | ac_log="
11326   # report actual input values of CONFIG_FILES etc. instead of their
11327   # values after options handling.
11328   ac_log="
11329 < This file was extended by OOPSE $as_me 4.0, which was
11330 < generated by GNU Autoconf 2.64.  Invocation command line was
11329 > This file was extended by OpenMD $as_me 1.0, which was
11330 > generated by GNU Autoconf 2.65.  Invocation command line was
11331  
11332    CONFIG_FILES    = $CONFIG_FILES
11333    CONFIG_HEADERS  = $CONFIG_HEADERS
# Line 11778 | Line 11366 | Usage: $0 [OPTION]... [TAG]...
11366  
11367    -h, --help       print this help, then exit
11368    -V, --version    print version number and configuration settings, then exit
11369 +      --config     print configuration, then exit
11370    -q, --quiet, --silent
11371                     do not print progress messages
11372    -d, --debug      don't remove temporary files
# Line 11797 | Line 11386 | cat >>$CONFIG_STATUS <<_ACEOF || ac_write_fail=1
11386  
11387   _ACEOF
11388   cat >>$CONFIG_STATUS <<_ACEOF || ac_write_fail=1
11389 + ac_cs_config="`$as_echo "$ac_configure_args" | sed 's/^ //; s/[\\""\`\$]/\\\\&/g'`"
11390   ac_cs_version="\\
11391 < OOPSE config.status 4.0
11392 < configured by $0, generated by GNU Autoconf 2.64,
11393 <  with options \\"`$as_echo "$ac_configure_args" | sed 's/^ //; s/[\\""\`\$]/\\\\&/g'`\\"
11391 > OpenMD config.status 1.0
11392 > configured by $0, generated by GNU Autoconf 2.65,
11393 >  with options \\"\$ac_cs_config\\"
11394  
11395   Copyright (C) 2009 Free Software Foundation, Inc.
11396   This config.status script is free software; the Free Software Foundation
# Line 11836 | Line 11426 | do
11426      ac_cs_recheck=: ;;
11427    --version | --versio | --versi | --vers | --ver | --ve | --v | -V )
11428      $as_echo "$ac_cs_version"; exit ;;
11429 +  --config | --confi | --conf | --con | --co | --c )
11430 +    $as_echo "$ac_cs_config"; exit ;;
11431    --debug | --debu | --deb | --de | --d | -d )
11432      debug=: ;;
11433    --file | --fil | --fi | --f )
# Line 12021 | Line 11613 | h
11613   t delim
11614   :nl
11615   h
11616 < s/\(.\{148\}\).*/\1/
11616 > s/\(.\{148\}\)..*/\1/
11617   t more1
11618   s/["\\]/\\&/g; s/^/"/; s/$/\\n"\\/
11619   p
# Line 12035 | Line 11627 | h
11627   t nl
11628   :delim
11629   h
11630 < s/\(.\{148\}\).*/\1/
11630 > s/\(.\{148\}\)..*/\1/
11631   t more2
11632   s/["\\]/\\&/g; s/^/"/; s/$/"/
11633   p

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