MERGE OpenMD trunk changes 1803:1811 into development branch
Creating busticated version of OpenMD
Almost all of the changes necessary to create OpenMD out of our old project (OOPSE-4)
converted samples over to the OOPSE-4 file format Fixed an MPI bug in thermodynamic integration
remove deprecated keywords from samples
fixed up some sample md files
Import of OOPSE v. 2.0
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