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root/OpenMD/branches/development/src/applications/staticProps/StaticProps.cpp
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Comparing branches/development/src/applications/staticProps/StaticProps.cpp (file contents):
Revision 1465 by chuckv, Fri Jul 9 23:08:25 2010 UTC vs.
Revision 1762 by plouden, Thu Jun 28 20:17:33 2012 UTC

# Line 36 | Line 36
36   * [1]  Meineke, et al., J. Comp. Chem. 26, 252-271 (2005).            
37   * [2]  Fennell & Gezelter, J. Chem. Phys. 124, 234104 (2006).          
38   * [3]  Sun, Lin & Gezelter, J. Chem. Phys. 128, 24107 (2008).          
39 < * [4]  Vardeman & Gezelter, in progress (2009).                        
39 > * [4]  Kuang & Gezelter,  J. Chem. Phys. 133, 164101 (2010).
40 > * [5]  Vardeman, Stocker & Gezelter, J. Chem. Theory Comput. 7, 834 (2011).
41   */
42  
43   #include <iostream>
44   #include <fstream>
45   #include <string>
46  
46 – #include "brains/Register.hpp"
47   #include "brains/SimCreator.hpp"
48   #include "brains/SimInfo.hpp"
49   #include "io/DumpReader.hpp"
# Line 64 | Line 64
64   #include "applications/staticProps/RippleOP.hpp"
65   #include "applications/staticProps/SCDOrderParameter.hpp"
66   #include "applications/staticProps/DensityPlot.hpp"
67 + #include "applications/staticProps/ObjectCount.hpp"
68   #include "applications/staticProps/RhoZ.hpp"
69   #include "applications/staticProps/pAngle.hpp"
70   #include "applications/staticProps/BondAngleDistribution.hpp"
71   #include "applications/staticProps/NanoVolume.hpp"
72 + #include "applications/staticProps/NanoLength.hpp"
73   #if defined(HAVE_FFTW_H) || defined(HAVE_DFFTW_H) || defined(HAVE_FFTW3_H)
74   #include "applications/staticProps/Hxy.hpp"
75   #endif
76   #include "applications/staticProps/RhoR.hpp"
77 <
77 > #include "applications/staticProps/AngleR.hpp"
78 > #include "applications/staticProps/TetrahedralityParam.hpp"
79 > #include "applications/staticProps/TetrahedralityParamZ.hpp"
80   using namespace OpenMD;
81  
82   int main(int argc, char* argv[]){
83    
84 <    //register force fields
85 <    registerForceFields();
86 <
87 <    gengetopt_args_info args_info;
88 <
89 <    //parse the command line option
90 <    if (cmdline_parser (argc, argv, &args_info) != 0) {
91 <        exit(1) ;
92 <    }
93 <
94 <    //get the dumpfile name
95 <    std::string dumpFileName = args_info.input_arg;
96 <    std::string sele1;
97 <    std::string sele2;
98 <    bool userSpecifiedSelect1;
99 <    bool userSpecifiedSelect2;
100 <
101 <    // check the first selection argument, or set it to the environment
102 <    // variable, or failing that, set it to "select all"
103 <
104 <    if (args_info.sele1_given) {
105 <        sele1 = args_info.sele1_arg;
84 >  
85 >  gengetopt_args_info args_info;
86 >  
87 >  //parse the command line option
88 >  if (cmdline_parser (argc, argv, &args_info) != 0) {
89 >    exit(1) ;
90 >  }
91 >  
92 >  //get the dumpfile name
93 >  std::string dumpFileName = args_info.input_arg;
94 >  std::string sele1;
95 >  std::string sele2;
96 >  bool userSpecifiedSelect1;
97 >  bool userSpecifiedSelect2;
98 >  
99 >  // check the first selection argument, or set it to the environment
100 >  // variable, or failing that, set it to "select all"
101 >  
102 >  if (args_info.sele1_given) {
103 >    sele1 = args_info.sele1_arg;
104 >  } else {
105 >    char*  sele1Env= getenv("SELECTION1");
106 >    if (sele1Env) {
107 >      sele1 = sele1Env;
108      } else {
109 <        char*  sele1Env= getenv("SELECTION1");
104 <        if (sele1Env) {
105 <            sele1 = sele1Env;
106 <        } else {
107 <            sele1 = "select all";
108 <        }
109 >      sele1 = "select all";
110      }
111 <
111 <    // check the second selection argument, or set it to the environment
112 <    // variable, or failing that, set it to "select all"
111 >  }
112    
113 <    if (args_info.sele2_given) {
114 <        sele2 = args_info.sele2_arg;
115 <    } else {
116 <        char* sele2Env = getenv("SELECTION1");
117 <        if (sele2Env) {
118 <            sele2 = sele2Env;            
119 <        } else {
120 <            sele2 = "select all";
121 <        }
113 >  // check the second selection argument, or set it to the environment
114 >  // variable, or failing that, set it to "select all"
115 >  
116 >  if (args_info.sele2_given) {
117 >    sele2 = args_info.sele2_arg;
118 >  } else {
119 >    char* sele2Env = getenv("SELECTION1");
120 >    if (sele2Env) {
121 >      sele2 = sele2Env;            
122 >    } else {
123 >      sele2 = "select all";
124      }
125 <
126 <
127 <    // Problems if sele1 wasn't specified, but
128 < // if (!args_info.scd_given) {
129 < //       sprintf( painCave.errMsg,
130 < //                "neither --sele1 option nor $SELECTION1 is set");
131 < //       painCave.severity = OPENMD_ERROR;
132 < //       painCave.isFatal = 1;
133 < //       simError();
134 < //     }
135 < //   }
136 <
137 <    // Problems if sele1 wasn't specified
138 <
139 < //     if(!args_info.scd_given && !args_info.density_given && !args_info.slab_density_given)  {
140 < //       sprintf( painCave.errMsg,
141 < //                "neither --sele2 option nor $SELECTION1 is set");
142 < //       painCave.severity = OPENMD_ERROR;
143 < //       painCave.isFatal = 1;
144 < //       simError();        
145 < //     }
146 < //   }
147 <
148 <    bool batchMode;
149 <    if (args_info.scd_given){
150 <        if (args_info.sele1_given && args_info.sele2_given && args_info.sele3_given) {
151 <            batchMode = false;
152 <        } else if (args_info.molname_given && args_info.begin_given && args_info.end_given) {
153 <            if (args_info.begin_arg < 0 || args_info.end_arg < 0 || args_info.begin_arg > args_info.end_arg-2) {
154 <                sprintf( painCave.errMsg,
154 <                         "below conditions are not satisfied:\n"
155 <                         "0 <= begin && 0<= end && begin <= end-2\n");
156 <                painCave.severity = OPENMD_ERROR;
157 <                painCave.isFatal = 1;
158 <                simError();                    
159 <            }
160 <            batchMode = true;        
161 <        } else{
162 <            sprintf( painCave.errMsg,
163 <                     "either --sele1, --sele2, --sele3 are specified,"
164 <                     " or --molname, --begin, --end are specified\n");
165 <            painCave.severity = OPENMD_ERROR;
166 <            painCave.isFatal = 1;
167 <            simError();        
168 <    
169 <        }
170 <    }
171 <
172 <    //parse md file and set up the system
173 <    SimCreator creator;
174 <    std::cout << "dumpFile = " << dumpFileName << "\n";
175 <    SimInfo* info = creator.createSim(dumpFileName);
176 <
177 <    RealType maxLen;
178 <    RealType zmaxLen;
179 <    if (args_info.length_given) {
180 <        maxLen = args_info.length_arg;
181 <        if (args_info.zlength_given){
182 <            zmaxLen = args_info.zlength_arg;
183 <        }
184 <    } else {
185 <        Mat3x3d hmat = info->getSnapshotManager()->getCurrentSnapshot()->getHmat();
186 <        maxLen = std::min(std::min(hmat(0, 0), hmat(1, 1)), hmat(2, 2)) /2.0;
187 <        zmaxLen = hmat(2,2);    
188 <    }    
189 <
190 <    StaticAnalyser* analyser;
191 <    if (args_info.gofr_given){
192 <        analyser= new GofR(info, dumpFileName, sele1, sele2, maxLen,
193 <                           args_info.nbins_arg);        
194 <    } else if (args_info.gofz_given) {
195 <        analyser= new GofZ(info, dumpFileName, sele1, sele2, maxLen,
196 <                           args_info.nbins_arg);
197 <    } else if (args_info.r_z_given) {
198 <        analyser  = new GofRZ(info, dumpFileName, sele1, sele2, maxLen, zmaxLen,
199 <                              args_info.nbins_arg, args_info.nbins_z_arg);
200 <    } else if (args_info.r_theta_given) {
201 <        analyser  = new GofRTheta(info, dumpFileName, sele1, sele2, maxLen,
202 <                                  args_info.nbins_arg, args_info.nanglebins_arg);
203 <    } else if (args_info.r_omega_given) {
204 <        analyser  = new GofROmega(info, dumpFileName, sele1, sele2, maxLen,
205 <                                  args_info.nbins_arg, args_info.nanglebins_arg);
206 <    } else if (args_info.theta_omega_given) {
207 <        analyser  = new GofAngle2(info, dumpFileName, sele1, sele2,
208 <                                  args_info.nanglebins_arg);
209 <    } else if (args_info.gxyz_given) {
210 <        if (args_info.refsele_given) {
211 <            analyser= new GofXyz(info, dumpFileName, sele1, sele2,args_info.refsele_arg,
212 <                                 maxLen, args_info.nbins_arg);        
213 <        } else {
214 <            sprintf( painCave.errMsg,
215 <                     "--refsele must set when --gxyz is used");
216 <            painCave.severity = OPENMD_ERROR;
217 <            painCave.isFatal = 1;
218 <            simError();  
219 <        }
220 <    } else if (args_info.twodgofr_given){
221 <      if (args_info.dz_given) {
222 <        analyser= new TwoDGofR(info, dumpFileName, sele1, sele2, maxLen,
223 <                               args_info.dz_arg, args_info.nbins_arg);        
224 <      } else {
125 >  }
126 >  
127 >  
128 >  // Problems if sele1 wasn't specified, but
129 >  // if (!args_info.scd_given) {
130 >  //       sprintf( painCave.errMsg,
131 >  //                "neither --sele1 option nor $SELECTION1 is set");
132 >  //       painCave.severity = OPENMD_ERROR;
133 >  //       painCave.isFatal = 1;
134 >  //       simError();
135 >  //     }
136 >  //   }
137 >  
138 >  // Problems if sele1 wasn't specified
139 >  
140 >  //     if(!args_info.scd_given && !args_info.density_given && !args_info.slab_density_given)  {
141 >  //       sprintf( painCave.errMsg,
142 >  //                "neither --sele2 option nor $SELECTION1 is set");
143 >  //       painCave.severity = OPENMD_ERROR;
144 >  //       painCave.isFatal = 1;
145 >  //       simError();        
146 >  //     }
147 >  //   }
148 >  
149 >  bool batchMode;
150 >  if (args_info.scd_given){
151 >    if (args_info.sele1_given && args_info.sele2_given && args_info.sele3_given) {
152 >      batchMode = false;
153 >    } else if (args_info.molname_given && args_info.begin_given && args_info.end_given) {
154 >      if (args_info.begin_arg < 0 || args_info.end_arg < 0 || args_info.begin_arg > args_info.end_arg-2) {
155          sprintf( painCave.errMsg,
156 <                 "A slab width (dz) must be specified when calculating TwoDGofR");
156 >                 "below conditions are not satisfied:\n"
157 >                 "0 <= begin && 0<= end && begin <= end-2\n");
158          painCave.severity = OPENMD_ERROR;
159          painCave.isFatal = 1;
160 <        simError();
160 >        simError();                    
161        }
162 <    } else if (args_info.p2_given) {
163 <        analyser  = new P2OrderParameter(info, dumpFileName, sele1, sele2);
164 <    } else if (args_info.rp2_given){
165 <        analyser = new RippleOP(info, dumpFileName, sele1, sele2);
166 <    } else if (args_info.bo_given){
167 <        if (args_info.rcut_given) {
168 <            analyser = new BondOrderParameter(info, dumpFileName, sele1,
169 <                                              args_info.rcut_arg,
170 <                                              args_info.nbins_arg);
240 <        } else {
241 <            sprintf( painCave.errMsg,
242 <                     "A cutoff radius (rcut) must be specified when calculating Bond Order Parameters");
243 <            painCave.severity = OPENMD_ERROR;
244 <            painCave.isFatal = 1;
245 <            simError();
246 <        }
247 <    } else if (args_info.bor_given){
248 <        if (args_info.rcut_given) {
249 <            analyser = new BOPofR(info, dumpFileName, sele1, args_info.rcut_arg,
250 <                                  args_info.nbins_arg, maxLen);
251 <        } else {
252 <            sprintf( painCave.errMsg,
253 <                     "A cutoff radius (rcut) must be specified when calculating Bond Order Parameters");
254 <            painCave.severity = OPENMD_ERROR;
255 <            painCave.isFatal = 1;
256 <            simError();
257 <        }
258 <    } else if (args_info.bad_given){
259 <        if (args_info.rcut_given) {
260 <            analyser = new BondAngleDistribution(info, dumpFileName, sele1, args_info.rcut_arg,
261 <                                                 args_info.nbins_arg);
262 <        } else {
263 <            sprintf( painCave.errMsg,
264 <                     "A cutoff radius (rcut) must be specified when calculating Bond Angle Distributions");
265 <            painCave.severity = OPENMD_ERROR;
266 <            painCave.isFatal = 1;
267 <            simError();
268 <        }
269 <    } else if (args_info.scd_given) {
270 <        if (batchMode) {
271 <            analyser  = new SCDOrderParameter(info, dumpFileName, args_info.molname_arg,
272 <                                              args_info.begin_arg, args_info.end_arg);
273 <        } else{
274 <            std::string sele3 = args_info.sele3_arg;
275 <            analyser  = new SCDOrderParameter(info, dumpFileName, sele1, sele2, sele3);
276 <        }
277 <    }else if (args_info.density_given) {
278 <        analyser= new DensityPlot(info, dumpFileName, sele1, sele2, maxLen,
279 <                                  args_info.nbins_arg);  
280 <    } else if (args_info.slab_density_given) {
281 <        analyser = new RhoZ(info, dumpFileName, sele1, args_info.nbins_arg);
282 <    } else if (args_info.p_angle_given) {
283 <        analyser = new pAngle(info, dumpFileName, sele1, args_info.nbins_arg);
284 < #if defined(HAVE_FFTW_H) || defined(HAVE_DFFTW_H) || defined(HAVE_FFTW3_H)
285 <    }else if (args_info.hxy_given) {
286 <        analyser = new Hxy(info, dumpFileName, sele1, args_info.nbins_x_arg,
287 <                           args_info.nbins_y_arg, args_info.nbins_arg);
288 < #endif
289 <    }else if (args_info.rho_r_given) {
290 <        if (args_info.radius_given){
291 <            analyser = new RhoR(info, dumpFileName, sele1, maxLen,args_info.nbins_arg,args_info.radius_arg);
292 <        }else{
293 <            sprintf( painCave.errMsg,
294 <                     "A particle radius (radius) must be specified when calculating Rho(r)");
295 <            painCave.severity = OPENMD_ERROR;
296 <            painCave.isFatal = 1;
297 <            simError();
298 <        }
299 <    }else if (args_info.hullvol_given) {
300 <        analyser = new NanoVolume(info, dumpFileName, sele1);
162 >      batchMode = true;        
163 >    } else{
164 >      sprintf( painCave.errMsg,
165 >               "either --sele1, --sele2, --sele3 are specified,"
166 >               " or --molname, --begin, --end are specified\n");
167 >      painCave.severity = OPENMD_ERROR;
168 >      painCave.isFatal = 1;
169 >      simError();        
170 >      
171      }
172 +  }
173    
174 <    if (args_info.output_given) {
175 <        analyser->setOutputName(args_info.output_arg);
174 >  //parse md file and set up the system
175 >  SimCreator creator;
176 >  std::cout << "dumpFile = " << dumpFileName << "\n";
177 >  SimInfo* info = creator.createSim(dumpFileName);
178 >
179 >  RealType maxLen;
180 >  RealType zmaxLen;
181 >  if (args_info.length_given) {
182 >    maxLen = args_info.length_arg;
183 >    if (args_info.zlength_given){
184 >      zmaxLen = args_info.zlength_arg;
185      }
186 <    if (args_info.step_given) {
187 <        analyser->setStep(args_info.step_arg);
186 >  } else {
187 >    Mat3x3d hmat = info->getSnapshotManager()->getCurrentSnapshot()->getHmat();
188 >    maxLen = std::min(std::min(hmat(0, 0), hmat(1, 1)), hmat(2, 2)) /2.0;
189 >    zmaxLen = hmat(2,2);    
190 >  }    
191 >  
192 >  StaticAnalyser* analyser;
193 >  if (args_info.gofr_given){
194 >    analyser= new GofR(info, dumpFileName, sele1, sele2, maxLen,
195 >                       args_info.nbins_arg);        
196 >  } else if (args_info.gofz_given) {
197 >    analyser= new GofZ(info, dumpFileName, sele1, sele2, maxLen,
198 >                       args_info.nbins_arg);
199 >  } else if (args_info.r_z_given) {
200 >    analyser  = new GofRZ(info, dumpFileName, sele1, sele2, maxLen, zmaxLen,
201 >                          args_info.nbins_arg, args_info.nbins_z_arg);
202 >  } else if (args_info.r_theta_given) {
203 >    analyser  = new GofRTheta(info, dumpFileName, sele1, sele2, maxLen,
204 >                              args_info.nbins_arg, args_info.nanglebins_arg);
205 >  } else if (args_info.r_omega_given) {
206 >    analyser  = new GofROmega(info, dumpFileName, sele1, sele2, maxLen,
207 >                              args_info.nbins_arg, args_info.nanglebins_arg);
208 >  } else if (args_info.theta_omega_given) {
209 >    analyser  = new GofAngle2(info, dumpFileName, sele1, sele2,
210 >                              args_info.nanglebins_arg);
211 >  } else if (args_info.gxyz_given) {
212 >    if (args_info.refsele_given) {
213 >      analyser= new GofXyz(info, dumpFileName, sele1, sele2,args_info.refsele_arg,
214 >                           maxLen, args_info.nbins_arg);        
215 >    } else {
216 >      sprintf( painCave.errMsg,
217 >               "--refsele must set when --gxyz is used");
218 >      painCave.severity = OPENMD_ERROR;
219 >      painCave.isFatal = 1;
220 >      simError();  
221      }
222 +  } else if (args_info.twodgofr_given){
223 +    if (args_info.dz_given) {
224 +      analyser= new TwoDGofR(info, dumpFileName, sele1, sele2, maxLen,
225 +                             args_info.dz_arg, args_info.nbins_arg);        
226 +    } else {
227 +      sprintf( painCave.errMsg,
228 +               "A slab width (dz) must be specified when calculating TwoDGofR");
229 +      painCave.severity = OPENMD_ERROR;
230 +      painCave.isFatal = 1;
231 +      simError();
232 +    }    
233 +  } else if (args_info.p2_given) {
234 +    if (args_info.sele1_given) {    
235 +      if (args_info.sele2_given)
236 +        analyser  = new P2OrderParameter(info, dumpFileName, sele1, sele2);
237 +      else
238 +        analyser  = new P2OrderParameter(info, dumpFileName, sele1);
239 +    } else {
240 +      sprintf( painCave.errMsg,
241 +               "At least one selection script (--sele1) must be specified when calculating P2 order parameters");
242 +      painCave.severity = OPENMD_ERROR;
243 +      painCave.isFatal = 1;
244 +      simError();
245 +    }
246 +  } else if (args_info.rp2_given){
247 +    analyser = new RippleOP(info, dumpFileName, sele1, sele2);
248 +  } else if (args_info.bo_given){
249 +    if (args_info.rcut_given) {
250 +      analyser = new BondOrderParameter(info, dumpFileName, sele1,
251 +                                        args_info.rcut_arg,
252 +                                        args_info.nbins_arg);
253 +    } else {
254 +      sprintf( painCave.errMsg,
255 +               "A cutoff radius (rcut) must be specified when calculating Bond Order Parameters");
256 +      painCave.severity = OPENMD_ERROR;
257 +      painCave.isFatal = 1;
258 +      simError();
259 +    }
260 +    
261 +  } else if (args_info.tet_param_given) {
262 +    if (args_info.rcut_given) {  
263 +      analyser = new TetrahedralityParam(info, dumpFileName, sele1,
264 +                                         args_info.rcut_arg,
265 +                                         args_info.nbins_arg);
266 +    } else {
267 +      sprintf( painCave.errMsg,
268 +               "A cutoff radius (rcut) must be specified when calculating Tetrahedrality Parameters");
269 +      painCave.severity = OPENMD_ERROR;
270 +      painCave.isFatal = 1;
271 +      simError();
272 +    }
273 +  } else if (args_info.tet_param_z_given) {
274 +    if (args_info.rcut_given) {  
275 +      analyser = new TetrahedralityParamZ(info, dumpFileName, sele1,
276 +                                         args_info.rcut_arg,
277 +                                         args_info.nbins_arg);
278 +    } else {
279 +      sprintf( painCave.errMsg,
280 +               "A cutoff radius (rcut) must be specified when calculating Tetrahedrality Parameters");
281 +      painCave.severity = OPENMD_ERROR;
282 +      painCave.isFatal = 1;
283 +      simError();
284 +    }
285 +  } else if (args_info.bor_given){
286 +    if (args_info.rcut_given) {
287 +      analyser = new BOPofR(info, dumpFileName, sele1, args_info.rcut_arg,
288 +                            args_info.nbins_arg, maxLen);
289 +    } else {
290 +      sprintf( painCave.errMsg,
291 +               "A cutoff radius (rcut) must be specified when calculating Bond Order Parameters");
292 +      painCave.severity = OPENMD_ERROR;
293 +      painCave.isFatal = 1;
294 +      simError();
295 +    }
296 +  } else if (args_info.bad_given){
297 +    if (args_info.rcut_given) {
298 +      analyser = new BondAngleDistribution(info, dumpFileName, sele1, args_info.rcut_arg,
299 +                                           args_info.nbins_arg);
300 +    } else {
301 +      sprintf( painCave.errMsg,
302 +               "A cutoff radius (rcut) must be specified when calculating Bond Angle Distributions");
303 +      painCave.severity = OPENMD_ERROR;
304 +      painCave.isFatal = 1;
305 +      simError();
306 +      }
307 +  } else if (args_info.scd_given) {
308 +    if (batchMode) {
309 +      analyser  = new SCDOrderParameter(info, dumpFileName, args_info.molname_arg,
310 +                                        args_info.begin_arg, args_info.end_arg);
311 +    } else{
312 +      std::string sele3 = args_info.sele3_arg;
313 +      analyser  = new SCDOrderParameter(info, dumpFileName, sele1, sele2, sele3);
314 +    }
315 +  }else if (args_info.density_given) {
316 +    analyser= new DensityPlot(info, dumpFileName, sele1, sele2, maxLen,
317 +                              args_info.nbins_arg);  
318 +  } else if (args_info.count_given) {
319 +    analyser = new ObjectCount(info, dumpFileName, sele1 );
320 +  } else if (args_info.slab_density_given) {
321 +    analyser = new RhoZ(info, dumpFileName, sele1, args_info.nbins_arg);
322 +  } else if (args_info.p_angle_given) {
323 +    analyser = new pAngle(info, dumpFileName, sele1, args_info.nbins_arg);
324 + #if defined(HAVE_FFTW_H) || defined(HAVE_DFFTW_H) || defined(HAVE_FFTW3_H)
325 +  }else if (args_info.hxy_given) {
326 +    analyser = new Hxy(info, dumpFileName, sele1, args_info.nbins_x_arg,
327 +                       args_info.nbins_y_arg, args_info.nbins_arg);
328 + #endif
329 +  }else if (args_info.rho_r_given) {
330 +    if (args_info.radius_given){
331 +      analyser = new RhoR(info, dumpFileName, sele1, maxLen,args_info.nbins_arg,args_info.radius_arg);
332 +    }else{
333 +      sprintf( painCave.errMsg,
334 +               "A particle radius (radius) must be specified when calculating Rho(r)");
335 +      painCave.severity = OPENMD_ERROR;
336 +      painCave.isFatal = 1;
337 +      simError();
338 +    }
339 +  } else if (args_info.hullvol_given) {
340 +    analyser = new NanoVolume(info, dumpFileName, sele1);
341 +  } else if (args_info.rodlength_given) {
342 +    analyser = new NanoLength(info, dumpFileName, sele1);
343 +  } else if (args_info.angle_r_given) {
344 +    analyser = new AngleR(info, dumpFileName, sele1, maxLen,args_info.nbins_arg);
345 +  }
346 +    
347 +  if (args_info.output_given) {
348 +    analyser->setOutputName(args_info.output_arg);
349 +  }
350 +  if (args_info.step_given) {
351 +    analyser->setStep(args_info.step_arg);
352 +  }
353 +
354 +  analyser->process();
355 +  
356 +  delete analyser;    
357 +  delete info;
358  
359 <    analyser->process();
311 <
312 <    delete analyser;    
313 <    delete info;
314 <
315 <    return 0;  
359 >  return 0;  
360   }
361  

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