--- trunk/src/brains/Register.cpp 2005/04/15 22:04:00 507 +++ trunk/src/brains/Register.cpp 2005/12/05 22:23:57 788 @@ -49,6 +49,9 @@ #include "integrators/NPTi.hpp" #include "integrators/NPTf.hpp" #include "integrators/NPTxyz.hpp" +#include "integrators/NPAT.hpp" +#include "integrators/NPrT.hpp" + #include "minimizers/MinimizerFactory.hpp" #include "minimizers/MinimizerCreator.hpp" #include "minimizers/PRCG.hpp" @@ -57,10 +60,24 @@ #include "UseTheForce/EAM_FF.hpp" #include "UseTheForce/ForceFieldFactory.hpp" #include "UseTheForce/ForceFieldCreator.hpp" +#include "UseTheForce/SHAPES_FF.hpp" +#include "UseTheForce/SC_FF.hpp" +#include "UseTheForce/CLAYFF.hpp" #include "lattice/LatticeFactory.hpp" #include "lattice/LatticeCreator.hpp" #include "lattice/FCCLattice.hpp" +#include "openbabel/amberformat.hpp" +#include "openbabel/fingerprintformat.hpp" +#include "openbabel/gromos96format.hpp" +#include "openbabel/oopseformat.hpp" +#include "openbabel/pdbformat.hpp" +#include "openbabel/povrayformat.hpp" +#include "openbabel/smilesformat.hpp" +#include "openbabel/tinkerformat.hpp" +#include "openbabel/xyzformat.hpp" + + namespace oopse { @@ -72,14 +89,22 @@ namespace oopse { ForceFieldFactory::getInstance()->registerForceField(new ForceFieldBuilder("LJ")); //in theory, EAM can also be merged ForceFieldFactory::getInstance()->registerForceField(new ForceFieldBuilder("EAM")); + //heck, that worked... let's try merging SHAPES + ForceFieldFactory::getInstance()->registerForceField(new ForceFieldBuilder("SHAPES")); + //Well if EAM worked... then Sutton-Chen should work like a CHARMM(Hopefully not). + ForceFieldFactory::getInstance()->registerForceField(new ForceFieldBuilder("SC")); + ForceFieldFactory::getInstance()->registerForceField(new ForceFieldBuilder("CLAY")); } void registerIntegrators() { IntegratorFactory::getInstance()->registerIntegrator(new IntegratorBuilder("NVE")); IntegratorFactory::getInstance()->registerIntegrator(new IntegratorBuilder("NVT")); - IntegratorFactory::getInstance()->registerIntegrator(new IntegratorBuilder("NPTi")); - IntegratorFactory::getInstance()->registerIntegrator(new IntegratorBuilder("NPTf")); - IntegratorFactory::getInstance()->registerIntegrator(new IntegratorBuilder("NPTxyz")); + IntegratorFactory::getInstance()->registerIntegrator(new IntegratorBuilder("NPTI")); + IntegratorFactory::getInstance()->registerIntegrator(new IntegratorBuilder("NPTF")); + IntegratorFactory::getInstance()->registerIntegrator(new IntegratorBuilder("NPTXYZ")); + IntegratorFactory::getInstance()->registerIntegrator(new IntegratorBuilder("NPAT")); + IntegratorFactory::getInstance()->registerIntegrator(new IntegratorBuilder("NPRT")); + } void registerMinimizers() { @@ -91,6 +116,17 @@ namespace oopse { LatticeFactory::getInstance()->registerLattice(new LatticeBuilder("FCC")); } + void registerOBFormats(){ + static OpenBabel::AmberPrepFormat amberFormatInstance; + static OpenBabel::FingerprintFormat fingerprintFormatInstance; + static OpenBabel::OOPSEFormat oopseFormatInstance; + static OpenBabel::PDBFormat pdbFormatInstance; + static OpenBabel::PovrayFormat povaryFormatInstance; + static OpenBabel::SMIFormat smilesFormatInstance; + static OpenBabel::TinkerFormat tinkerFormatInstance; + static OpenBabel::XYZFormat xyzFormatInstance; + } + void registerAll() { registerForceFields(); registerIntegrators();