| 256 |
|
int metaDataBlockStart = -1; |
| 257 |
|
int metaDataBlockEnd = -1; |
| 258 |
|
int i; |
| 259 |
< |
int mdOffset; |
| 259 |
> |
streamoff mdOffset; |
| 260 |
|
int mdFileVersion; |
| 261 |
|
|
| 262 |
|
#ifdef IS_MPI |
| 786 |
|
int nGlobalAtoms = info->getNGlobalAtoms(); |
| 787 |
|
|
| 788 |
|
beginAtomIndex = 0; |
| 789 |
< |
beginRigidBodyIndex = 0; |
| 789 |
> |
//rigidbody's index begins right after atom's |
| 790 |
> |
beginRigidBodyIndex = info->getNGlobalAtoms(); |
| 791 |
|
beginCutoffGroupIndex = 0; |
| 792 |
|
|
| 793 |
|
for(int i = 0; i < info->getNGlobalMolecules(); i++) { |
| 905 |
|
for (mol = info->beginMolecule(mi); mol != NULL; mol = info->nextMolecule(mi)) { |
| 906 |
|
int myGlobalIndex = mol->getGlobalIndex(); |
| 907 |
|
int globalIO = startingIOIndexForMol[myGlobalIndex]; |
| 908 |
< |
for (StuntDouble* integrableObject = mol->beginIntegrableObject(ioi); integrableObject != NULL; |
| 909 |
< |
integrableObject = mol->nextIntegrableObject(ioi)) { |
| 910 |
< |
integrableObject->setGlobalIntegrableObjectIndex(globalIO); |
| 911 |
< |
IOIndexToIntegrableObject[globalIO] = integrableObject; |
| 908 |
> |
for (StuntDouble* sd = mol->beginIntegrableObject(ioi); sd != NULL; |
| 909 |
> |
sd = mol->nextIntegrableObject(ioi)) { |
| 910 |
> |
sd->setGlobalIntegrableObjectIndex(globalIO); |
| 911 |
> |
IOIndexToIntegrableObject[globalIO] = sd; |
| 912 |
|
globalIO++; |
| 913 |
|
} |
| 914 |
|
} |
