--- branches/development/src/brains/SimInfo.cpp	2012/09/13 14:10:11	1798
+++ branches/development/src/brains/SimInfo.cpp	2013/02/20 13:52:51	1849
@@ -780,6 +780,22 @@ namespace OpenMD {
 #endif
 
     return atomTypes;        
+  }
+
+
+  int getGlobalCountOfType(AtomType* atype) {
+    /*
+    set<AtomType*> atypes = getSimulatedAtomTypes();
+    map<AtomType*, int> counts_;
+
+    for(mol = beginMolecule(mi); mol != NULL; mol = nextMolecule(mi)) {
+      for(atom = mol->beginAtom(ai); atom != NULL;
+          atom = mol->nextAtom(ai)) {
+	atom->getAtomType();
+      }      
+    }    
+    */
+    return 0;
   }
 
   void SimInfo::setupSimVariables() {
@@ -879,7 +895,6 @@ namespace OpenMD {
 
 
   void SimInfo::prepareTopology() {
-    int nExclude, nOneTwo, nOneThree, nOneFour;
 
     //calculate mass ratio of cutoff group
     SimInfo::MoleculeIterator mi;
@@ -928,11 +943,6 @@ namespace OpenMD {
     
     //scan topology 
 
-    nExclude = excludedInteractions_.getSize();
-    nOneTwo = oneTwoInteractions_.getSize();
-    nOneThree = oneThreeInteractions_.getSize();
-    nOneFour = oneFourInteractions_.getSize();
-
     int* excludeList = excludedInteractions_.getPairList();
     int* oneTwoList = oneTwoInteractions_.getPairList();
     int* oneThreeList = oneThreeInteractions_.getPairList();
@@ -1009,7 +1019,7 @@ namespace OpenMD {
    
   
   StuntDouble* SimInfo::getIOIndexToIntegrableObject(int index) {
-    if (index >= IOIndexToIntegrableObject.size()) {
+    if (index >= int(IOIndexToIntegrableObject.size())) {
       sprintf(painCave.errMsg,
               "SimInfo::getIOIndexToIntegrableObject Error: Integrable Object\n"
               "\tindex exceeds number of known objects!\n");