35 |
|
* |
36 |
|
* [1] Meineke, et al., J. Comp. Chem. 26, 252-271 (2005). |
37 |
|
* [2] Fennell & Gezelter, J. Chem. Phys. 124, 234104 (2006). |
38 |
< |
* [3] Sun, Lin & Gezelter, J. Chem. Phys. 128, 24107 (2008). |
38 |
> |
* [3] Sun, Lin & Gezelter, J. Chem. Phys. 128, 234107 (2008). |
39 |
|
* [4] Kuang & Gezelter, J. Chem. Phys. 133, 164101 (2010). |
40 |
|
* [5] Vardeman, Stocker & Gezelter, J. Chem. Theory Comput. 7, 834 (2011). |
41 |
|
*/ |
44 |
|
* @file VelocityVerletIntegrator.cpp |
45 |
|
* @author tlin |
46 |
|
* @date 11/09/2004 |
47 |
– |
* @time 16:16am |
47 |
|
* @version 1.0 |
48 |
|
*/ |
49 |
|
|
171 |
|
|
172 |
|
if (snap->getTime() >= currStatus) { |
173 |
|
//save statistics, before writeStat, we must save statistics |
175 |
– |
stats->collectStats(); |
174 |
|
saveConservedQuantity(); |
175 |
+ |
stats->collectStats(); |
176 |
|
|
177 |
|
if (simParams->getRNEMDParameters()->getUseRNEMD()) { |
178 |
|
rnemd_->writeOutputFile(); |
197 |
|
|
198 |
|
void VelocityVerletIntegrator::finalize() { |
199 |
|
dumpWriter->writeEor(); |
200 |
< |
rnemd_->writeOutputFile(); |
201 |
< |
|
200 |
> |
if (simParams->getRNEMDParameters()->getUseRNEMD()) { |
201 |
> |
rnemd_->writeOutputFile(); |
202 |
> |
} |
203 |
> |
|
204 |
|
delete dumpWriter; |
205 |
|
delete statWriter; |
206 |
|
|