| 35 |
|
* |
| 36 |
|
* [1] Meineke, et al., J. Comp. Chem. 26, 252-271 (2005). |
| 37 |
|
* [2] Fennell & Gezelter, J. Chem. Phys. 124, 234104 (2006). |
| 38 |
< |
* [3] Sun, Lin & Gezelter, J. Chem. Phys. 128, 24107 (2008). |
| 38 |
> |
* [3] Sun, Lin & Gezelter, J. Chem. Phys. 128, 234107 (2008). |
| 39 |
|
* [4] Kuang & Gezelter, J. Chem. Phys. 133, 164101 (2010). |
| 40 |
|
* [5] Vardeman, Stocker & Gezelter, J. Chem. Theory Comput. 7, 834 (2011). |
| 41 |
|
*/ |
| 44 |
|
* @file VelocityVerletIntegrator.cpp |
| 45 |
|
* @author tlin |
| 46 |
|
* @date 11/09/2004 |
| 47 |
– |
* @time 16:16am |
| 47 |
|
* @version 1.0 |
| 48 |
|
*/ |
| 49 |
|
|
| 175 |
|
saveConservedQuantity(); |
| 176 |
|
|
| 177 |
|
if (simParams->getRNEMDParameters()->getUseRNEMD()) { |
| 178 |
< |
rnemd_->getStatus(); |
| 178 |
> |
rnemd_->writeOutputFile(); |
| 179 |
|
} |
| 180 |
|
|
| 181 |
|
statWriter->writeStat(); |
| 197 |
|
|
| 198 |
|
void VelocityVerletIntegrator::finalize() { |
| 199 |
|
dumpWriter->writeEor(); |
| 200 |
< |
|
| 200 |
> |
if (simParams->getRNEMDParameters()->getUseRNEMD()) { |
| 201 |
> |
rnemd_->writeOutputFile(); |
| 202 |
> |
} |
| 203 |
> |
|
| 204 |
|
delete dumpWriter; |
| 205 |
|
delete statWriter; |
| 206 |
|
|