--- branches/development/src/io/DumpReader.hpp 2010/07/09 23:08:25 1465 +++ branches/development/src/io/DumpReader.hpp 2012/10/22 20:42:10 1808 @@ -36,14 +36,14 @@ * [1] Meineke, et al., J. Comp. Chem. 26, 252-271 (2005). * [2] Fennell & Gezelter, J. Chem. Phys. 124, 234104 (2006). * [3] Sun, Lin & Gezelter, J. Chem. Phys. 128, 24107 (2008). - * [4] Vardeman & Gezelter, in progress (2009). + * [4] Kuang & Gezelter, J. Chem. Phys. 133, 164101 (2010). + * [5] Vardeman, Stocker & Gezelter, J. Chem. Theory Comput. 7, 834 (2011). */ /** * @file DumpReader.hpp * @author tlin * @date 11/15/2004 - * @time 09:25am * @version 2.0 */ @@ -79,15 +79,13 @@ namespace OpenMD { protected: - void scanFile(); - + void scanFile(); void readSet(int whichFrame); - virtual void parseDumpLine(const std::string&); - + virtual void parseSiteLine(const std::string&); virtual void readFrameProperties(std::istream& inputStream); - - void readStuntDoubles(std::istream& inputStream); + void readStuntDoubles(std::istream& inputStream); + void readSiteData(std::istream& inputStream); SimInfo* info_;