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1 | + | /* |
2 | + | * Copyright (c) 2005 The University of Notre Dame. All Rights Reserved. |
3 | + | * |
4 | + | * The University of Notre Dame grants you ("Licensee") a |
5 | + | * non-exclusive, royalty free, license to use, modify and |
6 | + | * redistribute this software in source and binary code form, provided |
7 | + | * that the following conditions are met: |
8 | + | * |
9 | + | * 1. Acknowledgement of the program authors must be made in any |
10 | + | * publication of scientific results based in part on use of the |
11 | + | * program. An acceptable form of acknowledgement is citation of |
12 | + | * the article in which the program was described (Matthew |
13 | + | * A. Meineke, Charles F. Vardeman II, Teng Lin, Christopher |
14 | + | * J. Fennell and J. Daniel Gezelter, "OOPSE: An Object-Oriented |
15 | + | * Parallel Simulation Engine for Molecular Dynamics," |
16 | + | * J. Comput. Chem. 26, pp. 252-271 (2005)) |
17 | + | * |
18 | + | * 2. Redistributions of source code must retain the above copyright |
19 | + | * notice, this list of conditions and the following disclaimer. |
20 | + | * |
21 | + | * 3. Redistributions in binary form must reproduce the above copyright |
22 | + | * notice, this list of conditions and the following disclaimer in the |
23 | + | * documentation and/or other materials provided with the |
24 | + | * distribution. |
25 | + | * |
26 | + | * This software is provided "AS IS," without a warranty of any |
27 | + | * kind. All express or implied conditions, representations and |
28 | + | * warranties, including any implied warranty of merchantability, |
29 | + | * fitness for a particular purpose or non-infringement, are hereby |
30 | + | * excluded. The University of Notre Dame and its licensors shall not |
31 | + | * be liable for any damages suffered by licensee as a result of |
32 | + | * using, modifying or distributing the software or its |
33 | + | * derivatives. In no event will the University of Notre Dame or its |
34 | + | * licensors be liable for any lost revenue, profit or data, or for |
35 | + | * direct, indirect, special, consequential, incidental or punitive |
36 | + | * damages, however caused and regardless of the theory of liability, |
37 | + | * arising out of the use of or inability to use software, even if the |
38 | + | * University of Notre Dame has been advised of the possibility of |
39 | + | * such damages. |
40 | + | */ |
41 | + | |
42 | #include <stdlib.h> | |
43 | #include <stdio.h> | |
44 | #include <string.h> | |
# | Line 71 | Line 112 | |
112 | #define G_THERM_INT_LAMBDA 50 | |
113 | #define G_THERM_INT_K 51 | |
114 | #define G_FORCEFIELD_VARIANT 52 | |
115 | < | |
115 | > | #define G_FORCEFIELD_FILENAME 53 |
116 | Globals::Globals(){ | |
117 | initalize(); | |
118 | } | |
# | Line 155 | Line 196 | void Globals::initalize(){ | |
196 | addHash( "thermodynamicIntegrationLambda", G_THERM_INT_LAMBDA); | |
197 | addHash( "thermodynamicIntegrationK", G_THERM_INT_K); | |
198 | addHash( "forceFieldVariant", G_FORCEFIELD_VARIANT); | |
199 | < | |
199 | > | addHash( "forceFieldFileName", G_FORCEFIELD_FILENAME); |
200 | > | |
201 | strcpy( mixingRule,"standard"); //default mixing rules to standard. | |
202 | usePBC = 1; //default periodic boundry conditions to on | |
203 | useRF = 0; | |
# | Line 212 | Line 254 | void Globals::initalize(){ | |
254 | have_thermodynamic_integration_lambda = 0; | |
255 | have_thermodynamic_integration_k = 0; | |
256 | have_forcefield_variant = 0; | |
257 | + | have_forcefield_filename = 0; |
258 | ||
259 | } | |
260 | ||
# | Line 1389 | Line 1432 | int Globals::globalAssign( event* the_event ){ | |
1432 | ||
1433 | case STRING: | |
1434 | the_event->err_msg = | |
1435 | < | strdup( "Error in parsing meta-data file!\n\tminimizer_writefrq is not a double or int.\n" ); |
1435 | > | strdup( "Error in parsing meta-data file!\n\tminimizer_writefrq is not an int.\n" ); |
1436 | return 1; | |
1437 | break; | |
1438 | ||
1439 | case DOUBLE: | |
1440 | < | minimizer_writefrq= the_event->evt.asmt.rhs.dval; |
1441 | < | have_minimizer_writefrq = 1; |
1440 | > | the_event->err_msg = |
1441 | > | strdup( "Error in parsing meta-data file!\n\tminimizer_writefrq is not an int.\n" ); |
1442 | return 1; | |
1443 | break; | |
1444 | ||
# | Line 1505 | Line 1548 | int Globals::globalAssign( event* the_event ){ | |
1548 | ||
1549 | case STRING: | |
1550 | the_event->err_msg = | |
1551 | < | strdup( "Error in parsing meta-data file!\n\tminimizer_ls_maxiteration is not a double or int.\n" ); |
1551 | > | strdup( "Error in parsing meta-data file!\n\tminimizer_ls_maxiteration is not an int.\n" ); |
1552 | return 1; | |
1553 | break; | |
1554 | ||
1555 | case DOUBLE: | |
1556 | < | minimizer_ls_maxiteration = the_event->evt.asmt.rhs.dval; |
1557 | < | have_minimizer_ls_maxiteration = 1; |
1556 | > | the_event->err_msg = |
1557 | > | strdup( "Error in parsing meta-data file!\n\tminimizer_ls_maxiteration is not an int.\n" ); |
1558 | return 1; | |
1559 | break; | |
1560 | ||
# | Line 1694 | Line 1737 | int Globals::globalAssign( event* the_event ){ | |
1737 | return 0; | |
1738 | break; | |
1739 | // add more token cases here. | |
1740 | + | |
1741 | + | case G_FORCEFIELD_FILENAME: |
1742 | + | if( the_type == STRING ){ |
1743 | + | strcpy( forcefield_filename, the_event->evt.asmt.rhs.sval ); |
1744 | + | have_forcefield_filename = 1; |
1745 | + | return 1; |
1746 | + | } |
1747 | + | |
1748 | + | the_event->err_msg = |
1749 | + | strdup( "Error in parsing meta-data file!\n\tforceFieldFileName was not a string assignment.\n" ); |
1750 | + | return 0; |
1751 | + | break; |
1752 | + | // add more token cases here. |
1753 | } | |
1754 | } | |
1755 |
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