--- trunk/src/io/Globals.cpp 2007/04/06 21:53:43 1126 +++ trunk/src/io/Globals.cpp 2008/09/11 19:40:59 1291 @@ -93,6 +93,8 @@ Globals::Globals() { DefineOptionalParameter(ThermIntOmegaSpringConst, "thermIntOmegaSpringConst"); DefineOptionalParameter(SurfaceTension, "surfaceTension"); DefineOptionalParameter(PrintPressureTensor, "printPressureTensor"); + DefineOptionalParameter(TaggedAtomPair, "taggedAtomPair"); + DefineOptionalParameter(PrintTaggedPairDistance, "printTaggedPairDistance"); DefineOptionalParameter(CutoffPolicy, "cutoffPolicy"); DefineOptionalParameter(SwitchingFunctionType, "switchingFunctionType"); DefineOptionalParameter(HydroPropFile, "HydroPropFile"); @@ -101,12 +103,8 @@ Globals::Globals() { DefineOptionalParameter(FrozenBufferRadius, "frozenBufferRadius"); DefineOptionalParameter(LangevinBufferRadius, "langevinBufferRadius"); DefineOptionalParameter(NeighborListNeighbors,"NeighborListNeighbors"); - DefineOptionalParameter(TempDepViscosityA,"tempDepViscosityA"); - DefineOptionalParameter(TempDepViscosityB,"tempDepViscosityB"); - DefineOptionalParameter(TempDepViscosityC,"tempDepViscosityC"); - DefineOptionalParameter(TempDepViscosityD,"tempDepViscosityD"); - + DefineOptionalParameterWithDefaultValue(UsePeriodicBoundaryConditions, "usePeriodicBoundaryConditions", true); DefineOptionalParameterWithDefaultValue(UseAtomicVirial, "useAtomicVirial", true); DefineOptionalParameterWithDefaultValue(UseInitalTime, "useInitialTime", false);