| 51 |
|
namespace oopse { |
| 52 |
|
RestWriter::RestWriter(SimInfo* info) : |
| 53 |
|
info_(info) { |
| 54 |
< |
|
| 55 |
< |
//we use master - slave mode, only master node writes to disk |
| 54 |
> |
|
| 55 |
> |
// only the master node writes to the disk |
| 56 |
> |
#ifdef IS_MPI |
| 57 |
> |
if (worldRank == 0) { |
| 58 |
> |
#endif // is_mpi |
| 59 |
> |
|
| 60 |
|
outName = info_->getRestFileName(); |
| 61 |
+ |
|
| 62 |
+ |
#ifdef IS_MPI |
| 63 |
|
} |
| 64 |
+ |
#endif // is_mpi |
| 65 |
+ |
} |
| 66 |
|
|
| 67 |
|
RestWriter::~RestWriter() {} |
| 68 |
|
|
| 77 |
|
StuntDouble* integrableObject; |
| 78 |
|
SimInfo::MoleculeIterator mi; |
| 79 |
|
Molecule::IntegrableObjectIterator ii; |
| 80 |
< |
|
| 80 |
> |
|
| 81 |
|
#ifdef IS_MPI |
| 82 |
|
if(worldRank == 0 ){ |
| 83 |
|
#endif |
| 133 |
|
int intObIndex; |
| 134 |
|
RealType zAngle; |
| 135 |
|
|
| 136 |
< |
if (masterNode == 0) { |
| 136 |
> |
if (worldRank == masterNode) { |
| 137 |
|
std::map<int, RealType> zAngData; |
| 138 |
|
for(int i = 0 ; i < nproc; ++i) { |
| 139 |
|
if (i == masterNode) { |
| 144 |
|
integrableObject != NULL; |
| 145 |
|
integrableObject = mol->nextIntegrableObject(ii)) { |
| 146 |
|
|
| 147 |
< |
intObIndex = integrableObject->getGlobalIndex() ; |
| 147 |
> |
intObIndex = integrableObject->getGlobalIndex(); |
| 148 |
> |
|
| 149 |
|
zAngle = integrableObject->getZangle(); |
| 150 |
|
zAngData.insert(std::pair<int, RealType>(intObIndex, zAngle)); |
| 151 |
|
} |
| 152 |
|
} |
| 144 |
– |
|
| 153 |
|
} else { |
| 154 |
< |
for(int k = 0; k < nIntObjectsInProc[i]; ++k) { |
| 155 |
< |
MPI_Recv(&intObIndex, 1, MPI_INT, i, 0, MPI_COMM_WORLD,&ierr); |
| 156 |
< |
MPI_Recv(&zAngle, 1, MPI_REALTYPE, i, 0, MPI_COMM_WORLD,&ierr); |
| 157 |
< |
zAngData.insert(std::pair<int, RealType>(intObIndex, zAngle)); |
| 158 |
< |
} |
| 154 |
> |
for (mol = info_->beginMolecule(mi); mol != NULL; |
| 155 |
> |
mol = info_->nextMolecule(mi)) { |
| 156 |
> |
|
| 157 |
> |
for (integrableObject = mol->beginIntegrableObject(ii); |
| 158 |
> |
integrableObject != NULL; |
| 159 |
> |
integrableObject = mol->nextIntegrableObject(ii)) { |
| 160 |
> |
|
| 161 |
> |
MPI_Recv(&intObIndex, 1, MPI_INT, i, 0, MPI_COMM_WORLD,&ierr); |
| 162 |
> |
MPI_Recv(&zAngle, 1, MPI_REALTYPE, i, 0, MPI_COMM_WORLD,&ierr); |
| 163 |
> |
zAngData.insert(std::pair<int, RealType>(intObIndex, zAngle)); |
| 164 |
> |
} |
| 165 |
> |
} |
| 166 |
|
} |
| 152 |
– |
|
| 167 |
|
} |
| 168 |
|
|
| 169 |
|
finalOut |
| 172 |
|
|
| 173 |
|
std::map<int, RealType>::iterator l; |
| 174 |
|
for (l = zAngData.begin(); l != zAngData.end(); ++l) { |
| 175 |
< |
finalOut << l->second << "\n"; |
| 175 |
> |
sprintf( tempBuffer, |
| 176 |
> |
"%14.10lf\n", |
| 177 |
> |
l->second); |
| 178 |
> |
strcpy( writeLine, tempBuffer ); |
| 179 |
> |
|
| 180 |
> |
finalOut << writeLine; |
| 181 |
|
} |
| 182 |
+ |
|
| 183 |
+ |
finalOut.close(); |
| 184 |
|
|
| 185 |
|
} else { |
| 186 |
< |
|
| 187 |
< |
for (mol = info_->beginMolecule(mi); mol != NULL; |
| 188 |
< |
mol = info_->nextMolecule(mi)) { |
| 189 |
< |
|
| 190 |
< |
for (integrableObject = mol->beginIntegrableObject(ii); |
| 191 |
< |
integrableObject != NULL; |
| 192 |
< |
integrableObject = mol->nextIntegrableObject(ii)) { |
| 193 |
< |
intObIndex = integrableObject->getGlobalIndex(); |
| 194 |
< |
zAngle = integrableObject->getZangle(); |
| 195 |
< |
MPI_Send(&intObIndex, 1, MPI_INT, masterNode, 0, MPI_COMM_WORLD); |
| 196 |
< |
MPI_Send(&zAngle, 1, MPI_REALTYPE, masterNode, 0, MPI_COMM_WORLD); |
| 197 |
< |
} |
| 186 |
> |
for(int j = 1; j < nproc; ++j) { |
| 187 |
> |
for (mol = info_->beginMolecule(mi); mol != NULL; |
| 188 |
> |
mol = info_->nextMolecule(mi)) { |
| 189 |
> |
|
| 190 |
> |
for (integrableObject = mol->beginIntegrableObject(ii); |
| 191 |
> |
integrableObject != NULL; |
| 192 |
> |
integrableObject = mol->nextIntegrableObject(ii)) { |
| 193 |
> |
intObIndex = integrableObject->getGlobalIndex(); |
| 194 |
> |
zAngle = integrableObject->getZangle(); |
| 195 |
> |
|
| 196 |
> |
MPI_Send(&intObIndex, 1, MPI_INT, masterNode, 0, MPI_COMM_WORLD); |
| 197 |
> |
MPI_Send(&zAngle, 1, MPI_REALTYPE, masterNode, 0, MPI_COMM_WORLD); |
| 198 |
> |
} |
| 199 |
> |
} |
| 200 |
|
} |
| 201 |
|
} |
| 202 |
+ |
|
| 203 |
|
#endif |
| 180 |
– |
|
| 181 |
– |
#ifdef IS_MPI |
| 182 |
– |
finalOut.close(); |
| 183 |
– |
#endif |
| 184 |
– |
|
| 204 |
|
} |
| 205 |
|
|
| 206 |
|
} |
