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Comparing trunk/src/io/SectionParserManager.hpp (file contents):
Revision 246 by gezelter, Wed Jan 12 22:41:40 2005 UTC vs.
Revision 1390 by gezelter, Wed Nov 25 20:02:06 2009 UTC

# Line 1 | Line 1
1 < /*
1 > /*
2   * Copyright (c) 2005 The University of Notre Dame. All Rights Reserved.
3   *
4   * The University of Notre Dame grants you ("Licensee") a
# Line 6 | Line 6
6   * redistribute this software in source and binary code form, provided
7   * that the following conditions are met:
8   *
9 < * 1. Acknowledgement of the program authors must be made in any
10 < *    publication of scientific results based in part on use of the
11 < *    program.  An acceptable form of acknowledgement is citation of
12 < *    the article in which the program was described (Matthew
13 < *    A. Meineke, Charles F. Vardeman II, Teng Lin, Christopher
14 < *    J. Fennell and J. Daniel Gezelter, "OOPSE: An Object-Oriented
15 < *    Parallel Simulation Engine for Molecular Dynamics,"
16 < *    J. Comput. Chem. 26, pp. 252-271 (2005))
17 < *
18 < * 2. Redistributions of source code must retain the above copyright
9 > * 1. Redistributions of source code must retain the above copyright
10   *    notice, this list of conditions and the following disclaimer.
11   *
12 < * 3. Redistributions in binary form must reproduce the above copyright
12 > * 2. Redistributions in binary form must reproduce the above copyright
13   *    notice, this list of conditions and the following disclaimer in the
14   *    documentation and/or other materials provided with the
15   *    distribution.
# Line 37 | Line 28
28   * arising out of the use of or inability to use software, even if the
29   * University of Notre Dame has been advised of the possibility of
30   * such damages.
31 + *
32 + * SUPPORT OPEN SCIENCE!  If you use OpenMD or its source code in your
33 + * research, please cite the appropriate papers when you publish your
34 + * work.  Good starting points are:
35 + *                                                                      
36 + * [1]  Meineke, et al., J. Comp. Chem. 26, 252-271 (2005).            
37 + * [2]  Fennell & Gezelter, J. Chem. Phys. 124, 234104 (2006).          
38 + * [3]  Sun, Lin & Gezelter, J. Chem. Phys. 128, 24107 (2008).          
39 + * [4]  Vardeman & Gezelter, in progress (2009).                        
40   */
41  
42   #ifndef IO_SECTIONPARSERMANAGER_HPP
# Line 46 | Line 46
46  
47   #include "io/SectionParser.hpp"
48  
49 < namespace oopse {
49 > namespace OpenMD {
50  
51 < struct SectionParserContext {
51 >  struct SectionParserContext {
52      int priority;
53      SectionParser* sectionParser;
54      int lineNo;
55      std::streampos  offset;
56      bool isActive;
57 < };
57 >  };
58  
59 < class SameSectionParserFunctor {
60 <    public:
61 <        SameSectionParserFunctor(const std::string section) : section_(section) {}
59 >  class SameSectionParserFunctor {
60 >  public:
61 >    SameSectionParserFunctor(const std::string section) : section_(section) {}
62  
63 <        bool operator()(SectionParserContext context) {
64 <            return context.sectionParser->getSectionName() == section_;
65 <        }
63 >    bool operator()(SectionParserContext context) {
64 >      return context.sectionParser->getSectionName() == section_;
65 >    }
66          
67 <    private:
68 <        std::string section_;
69 < };
70 < /**
71 < * @class SectionParserManager SectionParserManager.hpp "io/SectionParserManager.hpp"
72 < * SectionParserManager maintains a priority list
73 < */
74 < class SectionParserManager {
67 >  private:
68 >    std::string section_;
69 >  };
70 >  /**
71 >   * @class SectionParserManager SectionParserManager.hpp "io/SectionParserManager.hpp"
72 >   * SectionParserManager maintains a priority list
73 >   */
74 >  class SectionParserManager {
75  
76 <    public:
77 <        typedef std::list<SectionParserContext> SectionParserContextList;
78 <        typedef SectionParserContextList::iterator iterator;
79 <        typedef SectionParserContextList::const_iterator const_iterator;
76 >  public:
77 >    typedef std::list<SectionParserContext> SectionParserContextList;
78 >    typedef SectionParserContextList::iterator iterator;
79 >    typedef SectionParserContextList::const_iterator const_iterator;
80  
81 <        SectionParserManager() : beginPriority_(0), priorityDifference_(100) {}
82 <        ~SectionParserManager();
81 >    SectionParserManager() : beginPriority_(0), priorityDifference_(100) {}
82 >    ~SectionParserManager();
83  
84 <        void parse(std::istream& input, ForceField&  ff);
84 >    void parse(std::istream& input, ForceField&  ff);
85          
86 <        void push_front(SectionParser* sp);
86 >    void push_front(SectionParser* sp);
87  
88 <        void push_back(SectionParser* sp);
88 >    void push_back(SectionParser* sp);
89          
90 <        void insert(SectionParser* sp, int priority);
90 >    void insert(SectionParser* sp, int priority);
91          
92 <        const_iterator begin() const {
93 <            return sectionParsers_.begin();
94 <        }
92 >    const_iterator begin() const {
93 >      return sectionParsers_.begin();
94 >    }
95  
96 <        const_iterator end() const{
97 <            return sectionParsers_.end();
98 <        }
96 >    const_iterator end() const{
97 >      return sectionParsers_.end();
98 >    }
99          
100 <    private:
101 <        iterator findSectionParser(const std::string& sectionName);
102 <        const int beginPriority_;
103 <        int priorityDifference_;
100 >  private:
101 >    iterator findSectionParser(const std::string& sectionName);
102 >    const int beginPriority_;
103 >    int priorityDifference_;
104          
105 <        SectionParserContextList sectionParsers_;
106 < };
105 >    SectionParserContextList sectionParsers_;
106 >  };
107  
108   }
109   #endif //IO_SECTIONPARSERMANAGER_HPP

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