| 36 | 
  | 
 * [1]  Meineke, et al., J. Comp. Chem. 26, 252-271 (2005).              | 
| 37 | 
  | 
 * [2]  Fennell & Gezelter, J. Chem. Phys. 124, 234104 (2006).           | 
| 38 | 
  | 
 * [3]  Sun, Lin & Gezelter, J. Chem. Phys. 128, 24107 (2008).           | 
| 39 | 
< | 
 * [4]  Vardeman & Gezelter, in progress (2009).                         | 
| 40 | 
< | 
 * | 
| 39 | 
> | 
 * [4] Kuang & Gezelter,  J. Chem. Phys. 133, 164101 (2010). | 
| 40 | 
> | 
 * [4] , Stocker & Gezelter, J. Chem. Theory Comput. 7, 834 (2011). * | 
| 41 | 
  | 
 *  ParameterManager.hpp | 
| 42 | 
  | 
 * | 
| 43 | 
  | 
 *  Created by Charles F. Vardeman II on 11/16/05. | 
| 149 | 
  | 
    } else { | 
| 150 | 
  | 
      sprintf(painCave.errMsg,  | 
| 151 | 
  | 
              "ParameterManager Error: " | 
| 152 | 
< | 
              "Not enough tokens to make pair!\n"); | 
| 152 | 
> | 
              "Incorrect number of tokens to make a pair!\n"); | 
| 153 | 
  | 
      painCave.severity = OPENMD_ERROR; | 
| 154 | 
  | 
      painCave.isFatal = 1; | 
| 155 | 
  | 
      simError();     | 
| 157 | 
  | 
    return false; | 
| 158 | 
  | 
  } | 
| 159 | 
  | 
  static std::string getParamType() { return "std::pair<int, int>";}     | 
| 160 | 
+ | 
}; | 
| 161 | 
+ | 
 | 
| 162 | 
+ | 
//OpenMD's internal Vector3d | 
| 163 | 
+ | 
template<>                      | 
| 164 | 
+ | 
struct ParameterTraits<OpenMD::Vector3d >{ | 
| 165 | 
+ | 
  typedef OpenMD::Vector3d  RepType; | 
| 166 | 
+ | 
  template<typename T> static bool    convert(T, RepType&){return false;}  | 
| 167 | 
+ | 
  template<typename T> static RepType convert(T v)        {RepType tmp; convert(v,tmp);return tmp;}  | 
| 168 | 
+ | 
  static bool convert(RepType v, RepType& r)            {r=v; return true;} | 
| 169 | 
+ | 
  static bool convert(std::string v, RepType& r) {  | 
| 170 | 
+ | 
    OpenMD::StringTokenizer tokenizer(v," ();,\t\n\r"); | 
| 171 | 
+ | 
    if (tokenizer.countTokens() == 3) { | 
| 172 | 
+ | 
      RealType v1 = tokenizer.nextTokenAsDouble(); | 
| 173 | 
+ | 
      RealType v2 = tokenizer.nextTokenAsDouble(); | 
| 174 | 
+ | 
      RealType v3 = tokenizer.nextTokenAsDouble(); | 
| 175 | 
+ | 
      r = OpenMD::Vector3d(v1, v2, v3); | 
| 176 | 
+ | 
      return true; | 
| 177 | 
+ | 
    } else { | 
| 178 | 
+ | 
      sprintf(painCave.errMsg,  | 
| 179 | 
+ | 
              "ParameterManager Error: " | 
| 180 | 
+ | 
              "Incorrect number of tokens to make a Vector3!\n"); | 
| 181 | 
+ | 
      painCave.severity = OPENMD_ERROR; | 
| 182 | 
+ | 
      painCave.isFatal = 1; | 
| 183 | 
+ | 
      simError();     | 
| 184 | 
+ | 
    } | 
| 185 | 
+ | 
    return false; | 
| 186 | 
+ | 
  } | 
| 187 | 
+ | 
  static std::string getParamType() { return "OpenMD::Vector3d";}     | 
| 188 | 
  | 
}; | 
| 189 | 
  | 
 | 
| 190 | 
  | 
 | 
| 204 | 
  | 
  virtual bool setData(unsigned long int) = 0; | 
| 205 | 
  | 
  virtual bool setData(RealType) = 0; | 
| 206 | 
  | 
  virtual bool setData(std::pair<int, int>) = 0; | 
| 207 | 
+ | 
  virtual bool setData(OpenMD::Vector3d) = 0; | 
| 208 | 
  | 
  virtual std::string getParamType() = 0; | 
| 209 | 
  | 
protected: | 
| 210 | 
  | 
  std::string keyword_; | 
| 217 | 
  | 
class Parameter : public ParameterBase{ | 
| 218 | 
  | 
public:     | 
| 219 | 
  | 
  typedef ParameterTraits<ParamType> ValueType; | 
| 220 | 
< | 
  void setDefaultValue(const ParamType& value) {data_ = value; defaultValue_ = true;} | 
| 220 | 
> | 
  void setDefaultValue(const ParamType& value) {data_ = value; defaultValue_ = true; empty_ = false;} | 
| 221 | 
  | 
  ParamType getData() { return data_;} | 
| 222 | 
  | 
   | 
| 223 | 
  | 
  virtual bool setData(std::string sval) { | 
| 239 | 
  | 
  virtual bool setData(std::pair<int, int> pval) { | 
| 240 | 
  | 
    return internalSetData<std::pair<int, int> >(pval); | 
| 241 | 
  | 
  } | 
| 242 | 
+ | 
  virtual bool setData(OpenMD::Vector3d pval) { | 
| 243 | 
+ | 
    return internalSetData<OpenMD::Vector3d >(pval); | 
| 244 | 
+ | 
  } | 
| 245 | 
  | 
   | 
| 246 | 
  | 
  virtual std::string getParamType() { return ParameterTraits<ParamType>::getParamType();} | 
| 247 | 
  | 
private:  | 
| 267 | 
  | 
bool have##NAME() { return !NAME.empty();}  \ | 
| 268 | 
  | 
TYPE get##NAME() { return NAME.getData();} | 
| 269 | 
  | 
 | 
| 270 | 
+ | 
#define DeclareAlterableParameter(NAME, TYPE)         \ | 
| 271 | 
+ | 
private:                                                   \ | 
| 272 | 
+ | 
Parameter<TYPE> NAME;                                     \ | 
| 273 | 
+ | 
public:                                                      \ | 
| 274 | 
+ | 
bool have##NAME() { return !NAME.empty();}  \ | 
| 275 | 
+ | 
TYPE get##NAME() { return NAME.getData();}  \ | 
| 276 | 
+ | 
bool set##NAME(TYPE s) { return NAME.setData(s);}  \ | 
| 277 | 
  | 
 | 
| 278 | 
  | 
 | 
| 279 | 
+ | 
 | 
| 280 | 
  | 
#define DefineParameter(NAME,KEYWORD)                              \ | 
| 281 | 
  | 
NAME.setKeyword(KEYWORD);                  \ | 
| 282 | 
  | 
parameters_.insert(std::map<std::string, ParameterBase*>::value_type(std::string(KEYWORD), static_cast<ParameterBase*>(&NAME))); |