# | Line 6 | Line 6 | |
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6 | * redistribute this software in source and binary code form, provided | |
7 | * that the following conditions are met: | |
8 | * | |
9 | < | * 1. Acknowledgement of the program authors must be made in any |
10 | < | * publication of scientific results based in part on use of the |
11 | < | * program. An acceptable form of acknowledgement is citation of |
12 | < | * the article in which the program was described (Matthew |
13 | < | * A. Meineke, Charles F. Vardeman II, Teng Lin, Christopher |
14 | < | * J. Fennell and J. Daniel Gezelter, "OOPSE: An Object-Oriented |
15 | < | * Parallel Simulation Engine for Molecular Dynamics," |
16 | < | * J. Comput. Chem. 26, pp. 252-271 (2005)) |
17 | < | * |
18 | < | * 2. Redistributions of source code must retain the above copyright |
9 | > | * 1. Redistributions of source code must retain the above copyright |
10 | * notice, this list of conditions and the following disclaimer. | |
11 | * | |
12 | < | * 3. Redistributions in binary form must reproduce the above copyright |
12 | > | * 2. Redistributions in binary form must reproduce the above copyright |
13 | * notice, this list of conditions and the following disclaimer in the | |
14 | * documentation and/or other materials provided with the | |
15 | * distribution. | |
# | Line 37 | Line 28 | |
28 | * arising out of the use of or inability to use software, even if the | |
29 | * University of Notre Dame has been advised of the possibility of | |
30 | * such damages. | |
31 | + | * |
32 | + | * SUPPORT OPEN SCIENCE! If you use OpenMD or its source code in your |
33 | + | * research, please cite the appropriate papers when you publish your |
34 | + | * work. Good starting points are: |
35 | + | * |
36 | + | * [1] Meineke, et al., J. Comp. Chem. 26, 252-271 (2005). |
37 | + | * [2] Fennell & Gezelter, J. Chem. Phys. 124, 234104 (2006). |
38 | + | * [3] Sun, Lin & Gezelter, J. Chem. Phys. 128, 24107 (2008). |
39 | + | * [4] Vardeman & Gezelter, in progress (2009). |
40 | */ | |
41 | ||
42 | /** | |
# | Line 49 | Line 49 | |
49 | #ifndef UTILS_STRINGUTILS_HPP | |
50 | #define UTILS_STRINGUTILS_HPP | |
51 | #include <string> | |
52 | + | #include <string.h> |
53 | #include <iostream> | |
54 | #include <fstream> | |
55 | #include <sstream> | |
56 | ||
57 | < | namespace oopse { |
57 | > | namespace OpenMD { |
58 | ||
59 | /** | |
60 | * Converts a string to UPPER CASE | |
# | Line 83 | Line 84 | namespace oopse { | |
84 | * | |
85 | * @return the line number of the block within the theStream | |
86 | */ | |
87 | < | int findBegin(std::istream &theStream, char* startText ); |
87 | > | int findBegin(std::istream &theStream, const char* startText ); |
88 | ||
89 | /** | |
90 | * Counts the number of tokens on line which are delimited by the characters | |
# | Line 102 | Line 103 | namespace oopse { | |
103 | */ | |
104 | int isEndLine(char *line); | |
105 | ||
106 | + | bool CaseInsensitiveEquals(char ch1, char ch2); |
107 | ||
108 | + | size_t CaseInsensitiveFind(const std::string& str1, const std::string& str2); |
109 | + | |
110 | + | |
111 | /** | |
112 | * Convert a variable to a string | |
113 | * @param T data type | |
# | Line 127 | Line 132 | namespace oopse { | |
132 | } | |
133 | return result; | |
134 | } | |
135 | + | |
136 | + | |
137 | + | template<typename T> |
138 | + | bool isType(const std::string& str) { |
139 | + | T result; |
140 | + | std::istringstream iss(str); |
141 | + | bool ret = true; |
142 | + | if (!(iss >> result)) { |
143 | + | ret = false; |
144 | + | } |
145 | + | return ret; |
146 | + | } |
147 | + | |
148 | + | bool isInteger(const std::string& str); |
149 | ||
150 | < | std::string OOPSE_itoa(int value, unsigned int base = 10); |
150 | > | std::string OpenMD_itoa(int value, unsigned int base = 10); |
151 | ||
152 | /**@todo need implementation */ | |
153 | std::string getPrefix(const std::string& str); | |
# | Line 136 | Line 155 | namespace oopse { | |
155 | /**@todo need implementation */ | |
156 | std::string getSuffix(const std::string& str); | |
157 | ||
139 | – | |
158 | ||
159 | + | template<class ContainerType> |
160 | + | std::string containerToString(const ContainerType& cont) { |
161 | + | std::ostringstream oss; |
162 | + | oss << "("; |
163 | + | typename ContainerType::const_iterator i = cont.begin(); |
164 | + | if (i != cont.end()) { |
165 | + | oss << *i; |
166 | + | ++i; |
167 | + | } |
168 | + | for (; i != cont.end();++i) { |
169 | + | oss << ", "; |
170 | + | oss << *i; |
171 | + | } |
172 | + | oss << ")"; |
173 | + | return oss.str(); |
174 | + | } |
175 | + | |
176 | ||
177 | } | |
178 | #endif |
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