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Comparing:
trunk/src/visitors/CompositeVisitor.cpp (file contents), Revision 246 by gezelter, Wed Jan 12 22:41:40 2005 UTC vs.
branches/development/src/visitors/CompositeVisitor.cpp (file contents), Revision 1874 by gezelter, Wed May 15 15:09:35 2013 UTC

# Line 1 | Line 1
1 < /*
1 > /*
2   * Copyright (c) 2005 The University of Notre Dame. All Rights Reserved.
3   *
4   * The University of Notre Dame grants you ("Licensee") a
# Line 6 | Line 6
6   * redistribute this software in source and binary code form, provided
7   * that the following conditions are met:
8   *
9 < * 1. Acknowledgement of the program authors must be made in any
10 < *    publication of scientific results based in part on use of the
11 < *    program.  An acceptable form of acknowledgement is citation of
12 < *    the article in which the program was described (Matthew
13 < *    A. Meineke, Charles F. Vardeman II, Teng Lin, Christopher
14 < *    J. Fennell and J. Daniel Gezelter, "OOPSE: An Object-Oriented
15 < *    Parallel Simulation Engine for Molecular Dynamics,"
16 < *    J. Comput. Chem. 26, pp. 252-271 (2005))
17 < *
18 < * 2. Redistributions of source code must retain the above copyright
9 > * 1. Redistributions of source code must retain the above copyright
10   *    notice, this list of conditions and the following disclaimer.
11   *
12 < * 3. Redistributions in binary form must reproduce the above copyright
12 > * 2. Redistributions in binary form must reproduce the above copyright
13   *    notice, this list of conditions and the following disclaimer in the
14   *    documentation and/or other materials provided with the
15   *    distribution.
# Line 37 | Line 28
28   * arising out of the use of or inability to use software, even if the
29   * University of Notre Dame has been advised of the possibility of
30   * such damages.
31 + *
32 + * SUPPORT OPEN SCIENCE!  If you use OpenMD or its source code in your
33 + * research, please cite the appropriate papers when you publish your
34 + * work.  Good starting points are:
35 + *                                                                      
36 + * [1]  Meineke, et al., J. Comp. Chem. 26, 252-271 (2005).            
37 + * [2]  Fennell & Gezelter, J. Chem. Phys. 124, 234104 (2006).          
38 + * [3]  Sun, Lin & Gezelter, J. Chem. Phys. 128, 234107 (2008).          
39 + * [4]  Kuang & Gezelter,  J. Chem. Phys. 133, 164101 (2010).
40 + * [5]  Vardeman, Stocker & Gezelter, J. Chem. Theory Comput. 7, 834 (2011).
41   */
42  
43   #include <cstring>
# Line 44 | Line 45
45   #include "primitives/RigidBody.hpp"
46   #include "primitives/DirectionalAtom.hpp"
47  
48 < namespace oopse {
48 > namespace OpenMD {
49  
50 < CompositeVisitor::~CompositeVisitor(){
51 <  VisitorIterator i;
52 <  BaseVisitor* curVisitor;
50 >  CompositeVisitor::~CompositeVisitor(){
51 >    VisitorIterator i;
52 >    BaseVisitor* curVisitor;
53    
54 <  for(curVisitor = beginVisitor(i); curVisitor; curVisitor = nextVisitor(i))
55 <    delete curVisitor;  
54 >    for(curVisitor = beginVisitor(i); curVisitor; curVisitor = nextVisitor(i))
55 >      delete curVisitor;  
56  
57 <  visitorList.clear();
57 >    visitorList.clear();
58    
59 < }
60 < void CompositeVisitor::addVisitor(BaseVisitor* newVisitor, int priority){
61 <  VisitorIterator i;
62 <  int curPriority;
59 >  }
60 >  void CompositeVisitor::addVisitor(BaseVisitor* newVisitor, int priority){
61 >    VisitorIterator i;
62 >    int curPriority;
63    
64 <  for(i = visitorList.begin(); i != visitorList.end(); i++){
65 <    curPriority = (*i).second;
66 <    //if new visitor has higher priority, just insert it before current visitor
67 <    if(priority > curPriority){      
68 <      visitorList.insert(i, std::make_pair(newVisitor, priority));
64 >    for(i = visitorList.begin(); i != visitorList.end(); ++i){
65 >      curPriority = (*i).second;
66 >      //if new visitor has higher priority, just insert it before current visitor
67 >      if(priority > curPriority){      
68 >        visitorList.insert(i, std::make_pair(newVisitor, priority));
69 >      }
70      }
71 +
72 +    //if new visitor has lowest priority, insert it at the end of the list
73 +    visitorList.insert(visitorList.end(), std::make_pair(newVisitor, priority));
74    }
75  
76 <  //if new visitor has lowest priority, insert it at the end of the list
77 <  visitorList.insert(visitorList.end(), std::make_pair(newVisitor, priority));
78 < }
76 >  BaseVisitor* CompositeVisitor::beginVisitor(VisitorIterator& i){
77 >    i = visitorList.begin();
78 >    return i != visitorList.end() ? (*i).first : NULL;
79 >  }
80  
81 < BaseVisitor* CompositeVisitor::beginVisitor(VisitorIterator& i){
82 <  i = visitorList.begin();
83 <  return i != visitorList.end() ? (*i).first : NULL;
78 < }
81 >  BaseVisitor* CompositeVisitor::nextVisitor(VisitorIterator& i){
82 >    ++i;
83 >    return i != visitorList.end() ? (*i).first : NULL;
84  
85 < BaseVisitor* CompositeVisitor::nextVisitor(VisitorIterator& i){
81 <  ++i;
82 <  return i != visitorList.end() ? (*i).first : NULL;
85 >  }
86  
87 < }
87 >  void CompositeVisitor::visit(Atom* atom){
88 >    VisitorIterator i;
89 >    BaseVisitor* curVisitor;
90  
91 < void CompositeVisitor::visit(Atom* atom){
92 < VisitorIterator i;
93 <  BaseVisitor* curVisitor;
91 >    for(curVisitor = beginVisitor(i); curVisitor; curVisitor = nextVisitor(i))
92 >      atom->accept(curVisitor);
93 >  }
94  
95 <  for(curVisitor = beginVisitor(i); curVisitor; curVisitor = nextVisitor(i))
96 <    atom->accept(curVisitor);
97 < }
95 >  void CompositeVisitor::visit(DirectionalAtom* datom){
96 >    VisitorIterator i;
97 >    BaseVisitor* curVisitor;
98  
99 < void CompositeVisitor::visit(DirectionalAtom* datom){
100 < VisitorIterator i;
101 <  BaseVisitor* curVisitor;
99 >    for(curVisitor = beginVisitor(i); curVisitor; curVisitor = nextVisitor(i))
100 >      datom->accept(curVisitor);
101 >  }
102 >  void CompositeVisitor::visit(RigidBody* rb){
103 >    VisitorIterator i;
104 >    BaseVisitor* curVisitor;
105 >    std::vector<Atom*> myAtoms;
106 >    std::vector<Atom*>::iterator atomIter;
107  
108 <  for(curVisitor = beginVisitor(i); curVisitor; curVisitor = nextVisitor(i))
99 <    datom->accept(curVisitor);
100 < }
101 < void CompositeVisitor::visit(RigidBody* rb){
102 <  VisitorIterator i;
103 <  BaseVisitor* curVisitor;
104 <   std::vector<Atom*> myAtoms;
105 <   std::vector<Atom*>::iterator atomIter;
106 <
107 <  myAtoms = rb->getAtoms();
108 >    myAtoms = rb->getAtoms();
109    
110 <  for(curVisitor = beginVisitor(i); curVisitor; curVisitor = nextVisitor(i)){
111 <    rb->accept(curVisitor);
110 >    for(curVisitor = beginVisitor(i); curVisitor; curVisitor = nextVisitor(i)){
111 >      rb->accept(curVisitor);
112      
113 <    for(atomIter = myAtoms.begin(); atomIter != myAtoms.end(); ++atomIter)
114 <      (*atomIter)->accept(curVisitor);
115 <  }
113 >      for(atomIter = myAtoms.begin(); atomIter != myAtoms.end(); ++atomIter)
114 >        (*atomIter)->accept(curVisitor);
115 >    }
116  
117    
118    
119 < }
119 >  }
120  
121 < const  std::string CompositeVisitor::toString(){
122 <  VisitorIterator i;
123 <   std::string result;
124 <  char buffer[65535];
121 >  const  std::string CompositeVisitor::toString(){
122 >    VisitorIterator i;
123 >    std::string result;
124 >    char buffer[65535];
125  
126 <  sprintf(buffer ,"******************************************************************\n");
127 <  result += buffer;
126 >    sprintf(buffer ,"******************************************************************\n");
127 >    result += buffer;
128    
129 <  sprintf(buffer ,"Visitor name: %s\n", visitorName.c_str());
130 <  result += buffer;
129 >    sprintf(buffer ,"Visitor name: %s\n", visitorName.c_str());
130 >    result += buffer;
131  
132 <  sprintf(buffer , "Visitor Description: visitor manager  maintaining a priority  list\n");
133 <  result += buffer;
132 >    sprintf(buffer , "Visitor Description: visitor manager  maintaining a priority  list\n");
133 >    result += buffer;
134  
135 <  sprintf(buffer , "visitors in current priority list:\n");
135 <  result += buffer;
136 <  
137 <  for(i = visitorList.begin(); i != visitorList.end(); i++){
138 <    sprintf(buffer, "Priority = %d\tvisitor = %s\n",  (*i).second, ((*i).first->getVisitorName()).c_str());
135 >    sprintf(buffer , "visitors in current priority list:\n");
136      result += buffer;
137 <  }
137 >  
138 >    for(i = visitorList.begin(); i != visitorList.end(); ++i){
139 >      sprintf(buffer, "Priority = %d\tvisitor = %s\n",  (*i).second, ((*i).first->getVisitorName()).c_str());
140 >      result += buffer;
141 >    }
142  
143 <  sprintf(buffer, "Detail information about every visitor:\n");
143 >    sprintf(buffer, "Detail information about every visitor:\n");
144  
145  
146 <  for(i = visitorList.begin(); i != visitorList.end(); i++)
147 <    result += ((*i).first)->toString();
146 >    for(i = visitorList.begin(); i != visitorList.end(); ++i)
147 >      result += ((*i).first)->toString();
148  
149 <  sprintf(buffer ,"******************************************************************\n");
150 <  result += buffer;
149 >    sprintf(buffer ,"******************************************************************\n");
150 >    result += buffer;
151    
152 <  return result;
153 < }
152 >    return result;
153 >  }
154  
155 < void CompositeVisitor::update(){
156 <  VisitorIterator i;
157 <  BaseVisitor* curVisitor;  
155 >  void CompositeVisitor::update(){
156 >    VisitorIterator i;
157 >    BaseVisitor* curVisitor;  
158    
159 <  for(curVisitor = beginVisitor(i); curVisitor; curVisitor = nextVisitor(i))
160 <    curVisitor->update();
161 < }
159 >    for(curVisitor = beginVisitor(i); curVisitor; curVisitor = nextVisitor(i))
160 >      curVisitor->update();
161 >  }
162  
163 < }//namespace oopse
163 > }//namespace OpenMD

Comparing:
trunk/src/visitors/CompositeVisitor.cpp (property svn:keywords), Revision 246 by gezelter, Wed Jan 12 22:41:40 2005 UTC vs.
branches/development/src/visitors/CompositeVisitor.cpp (property svn:keywords), Revision 1874 by gezelter, Wed May 15 15:09:35 2013 UTC

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