[ViewVC] Diff of: OpenMD/branches/development/src/visitors/ReplacementVisitor.hpp

Comparing branches/development/src/visitors/ReplacementVisitor.hpp (file contents):
Revision 1628 by chuckv, Fri Jul 9 23:08:25 2010 UTC vs.
Revision 1629 by gezelter, Wed Sep 14 21:15:17 2011 UTC

+      addSite("O", Vector3d(0.0,  0.0,    -0.0654));
+      addSite("X", Vector3d(0.0,  0.0,     0.0   ), Vector3d(0,0,1));
-+
+  };
-+
-+
+  class GBtailVisitor : public ReplacementVisitor{
-+
+  public:
-+
+    GBtailVisitor(SimInfo* info) : ReplacementVisitor(info) {
-+
+      visitorName = "GBtailVisitor";
-+
-+
-+
+      /// these are the atom names we can replace with a fixed structure
-+
+        addReplacedAtomName("GBtail");
-+
-+
+        // this is the reference structure we'll use for the replacement:
-+
+        addSite("C", Vector3d(0.0, 0.0, 9.0));
-+
+        addSite("C", Vector3d(0.0, 0.0, 0.0));
-+
+        addSite("C", Vector3d(0.0, 0.0, -9.0));
-+
+    }
+  };
-+
-+
+  class GBheadVisitor : public ReplacementVisitor{
-+
+  public:
-+
+    GBheadVisitor(SimInfo* info) : ReplacementVisitor(info) {
-+
+      visitorName = "GBheadVisitor";
-+
-+
+      /// these are the atom names we can replace with a fixed structure
-+
+        addReplacedAtomName("GBhead");
-+
-+
+        // this is the reference structure we'll use for the replacement:
-+
+        addSite("N", Vector3d(0.0, 0.0, 3.5));
-+
+        addSite("C", Vector3d(0.0, 0.0, 0.0));
-+
+        addSite("P", Vector3d(0.0, 0.0, -3.5));
-+
+    }
-+
+  };
-+
-+
+}//namespace OpenMD
+#endif

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