| 10 |
|
|
| 11 |
|
|
| 12 |
|
ensemble = "SMIPD"; |
| 13 |
< |
forceField = "DUFF"; |
| 13 |
> |
forceField = "Amber"; |
| 14 |
|
electrostaticSummationMethod = "shifted_force"; |
| 15 |
|
electrostaticScreeningMethod = "undamped"; |
| 16 |
|
dielectric = 80.0; |
| 17 |
< |
dampingAlpha = 0.20; |
| 17 |
> |
dampingAlpha = 0.18; |
| 18 |
|
cutoffRadius = 9.0; |
| 19 |
+ |
switchingRadius=9.0; |
| 20 |
|
|
| 21 |
|
targetTemp = 5.0; |
| 22 |
|
targetPressure = 1.0; |
| 23 |
< |
//viscosity = 0.0089; |
| 23 |
< |
thermalConductivity = 0.58; |
| 24 |
< |
thermalLength = 5; |
| 25 |
< |
tauThermostat = 1e3; |
| 26 |
< |
tauBarostat = 1e4; |
| 23 |
> |
viscosity = 0.0089; |
| 24 |
|
|
| 25 |
|
dt = 1.0 ; |
| 26 |
|
runTime = 500; |
| 28 |
|
useInitialExtendedSystemState = "false"; |
| 29 |
|
usePeriodicBoundaryConditions = "false"; |
| 30 |
|
|
| 34 |
– |
//tempSet = "true"; |
| 35 |
– |
//thermalTime = 10; |
| 31 |
|
sampleTime = 20; |
| 32 |
|
statusTime = 5; |
| 33 |
|
|