| 60 |
|
} |
| 61 |
|
|
| 62 |
|
molecule{ |
| 63 |
+ |
name = "TRED"; |
| 64 |
+ |
|
| 65 |
+ |
atom[0]{ |
| 66 |
+ |
type = "TRED"; |
| 67 |
+ |
position( 0.0, 0.0, 0.0 ); |
| 68 |
+ |
orientation( 0.0, 0.0, 0.0 ); |
| 69 |
+ |
} |
| 70 |
+ |
atom[1]{ |
| 71 |
+ |
type = "EP_TRED"; |
| 72 |
+ |
position( 0.0, 0.0, 0.5 ); |
| 73 |
+ |
} |
| 74 |
+ |
|
| 75 |
+ |
rigidBody[0]{ |
| 76 |
+ |
members(0, 1); |
| 77 |
+ |
} |
| 78 |
+ |
|
| 79 |
+ |
cutoffGroup{ |
| 80 |
+ |
members(0, 1); |
| 81 |
+ |
} |
| 82 |
+ |
} |
| 83 |
+ |
|
| 84 |
+ |
molecule{ |
| 85 |
|
name = "TIP3P"; |
| 86 |
|
|
| 87 |
|
atom[0]{ |
| 179 |
|
|
| 180 |
|
atom[0]{ |
| 181 |
|
type = "O_TIP5P"; |
| 182 |
+ |
position( 0.0, 0.0, -0.06556 ); |
| 183 |
+ |
} |
| 184 |
+ |
atom[1]{ |
| 185 |
+ |
type = "H_TIP5P"; |
| 186 |
+ |
position( 0.0, 0.75695, 0.52032 ); |
| 187 |
+ |
} |
| 188 |
+ |
atom[2]{ |
| 189 |
+ |
type = "H_TIP5P"; |
| 190 |
+ |
position( 0.0, -0.75695, 0.52032 ); |
| 191 |
+ |
} |
| 192 |
+ |
atom[3]{ |
| 193 |
+ |
type = "EP_TIP5P"; |
| 194 |
+ |
position( 0.57154, 0.0, -0.46971 ); |
| 195 |
+ |
} |
| 196 |
+ |
atom[4]{ |
| 197 |
+ |
type = "EP_TIP5P"; |
| 198 |
+ |
position( -0.57154, 0.0, -0.46971 ); |
| 199 |
+ |
} |
| 200 |
+ |
|
| 201 |
+ |
rigidBody[0]{ |
| 202 |
+ |
|
| 203 |
+ |
members(0, 1, 2, 3, 4); |
| 204 |
+ |
} |
| 205 |
+ |
|
| 206 |
+ |
|
| 207 |
+ |
cutoffGroup{ |
| 208 |
+ |
|
| 209 |
+ |
members(0, 1, 2, 3, 4); |
| 210 |
+ |
} |
| 211 |
+ |
} |
| 212 |
+ |
|
| 213 |
+ |
molecule{ |
| 214 |
+ |
name = "TIP5P-E"; |
| 215 |
+ |
|
| 216 |
+ |
atom[0]{ |
| 217 |
+ |
type = "O_TIP5P-E"; |
| 218 |
|
position( 0.0, 0.0, -0.06556 ); |
| 219 |
|
} |
| 220 |
|
atom[1]{ |