Revision 1026 - Directory Listing - [select for diffs]
Modified Wed Aug 30 21:04:04 2006 UTC (19 years, 6 months ago) by gezelter
Diff to previous 968 , to selected 881

Changing utility programs to use the new file format

wrapping back to PBC by molecule instead of by individual atom

Revision 954 - Directory Listing - [select for diffs]
Modified Wed May 10 01:44:48 2006 UTC (19 years, 9 months ago) by tim
Diff to previous 881

adding a gay-berne switch to Dump2XYZ

Adding visitor for GBlipid atom type

Revision 543 - Directory Listing - [select for diffs]
Modified Thu May 26 22:45:00 2005 UTC (20 years, 9 months ago) by tim
Diff to previous 527 , to selected 881

adding AtomNameVisitor to convert atom name to its base name; wrappingvisitor
now wrap back to the center of the mass; adding P2OrderParameter into StaticProps

Couple of changes for TAP water.  Need to parametrize.

Revision 507 - Directory Listing - [select for diffs]
Modified Fri Apr 15 22:04:00 2005 UTC (20 years, 10 months ago) by gezelter
Diff to previous 466 , to selected 881

xemacs has been drafted to perform our indentation services

forget to delete prepareVisitor in Dump2XYZ

Revision 447 - Directory Listing - [select for diffs]
Modified Tue Mar 22 16:38:37 2005 UTC (20 years, 11 months ago) by tim
Diff to previous 415 , to selected 881

avoid building parallel executable for dump2XYZ, simpleBuilder, staticProps and dynamicProps

fix compilation issue

Revision 413 - Directory Listing - [select for diffs]
Modified Wed Mar 9 17:30:29 2005 UTC (21 years ago) by tim
Diff to previous 381 , to selected 881

adding IndexFinder which is used to select the molecules; Seperate ElectrostaticAtomTypesSectionParser into
ChargeAtomTypesSectionParser and MultipoleAtomTypesSectionParser;remove print dipole option from Dump2XYZ;

adding MersenneTwister random number generator

Revision 369 - Directory Listing - [select for diffs]
Modified Fri Feb 18 23:07:32 2005 UTC (21 years ago) by tim
Diff to previous 324 , to selected 881

adding LipidTransVisitor, GofXyz is working now

dynamicProps get built

Revision 304 - Directory Listing - [select for diffs]
Modified Mon Feb 7 22:38:35 2005 UTC (21 years ago) by tim
Diff to previous 302 , to selected 881

update help info

update help info for Dump2XYZ

Revision 294 - Directory Listing - [select for diffs]
Modified Fri Feb 4 22:46:10 2005 UTC (21 years, 1 month ago) by tim
Diff to previous 291 , to selected 881

remove SelectionVisitor

dump2Xyz now take advantage of selection library

Revision 273 - Directory Listing - [select for diffs]
Modified Tue Jan 25 17:45:23 2005 UTC (21 years, 1 month ago) by tim
Diff to previous 267 , to selected 881

(1) complete section parser's error message
(2) add GhostTorsion
(3) accumulate inertial tensor from the directional atoms before calculate rigidbody's inertial tensor

moved Package variable into subdirectory makefiles to speed up
the building process

Revision 250 - Directory Listing - [select for diffs]
Modified Wed Jan 12 23:21:42 2005 UTC (21 years, 1 month ago) by tim
Diff to previous 246 , to selected 881

minor fix

merging new_design branch into OOPSE-2.0

Revision 211 - Directory Listing - [select for diffs]
Modified Fri Nov 5 21:45:14 2004 UTC (21 years, 4 months ago) by chrisfen
Diff to previous 24 , to selected 881

Added the linear visitor

define DEV_ROOT as relative path

Revision 14 - Directory Listing - [select for diffs]
Modified Wed Sep 29 14:59:25 2004 UTC (21 years, 5 months ago) by tim
Diff to previous 12 , to selected 881

change Makefile to relative path

change directory structure of application. Every executable file is replaced in seperate directory