| 53 |  | #include "applications/dynamicProps/RCorrFunc.hpp" | 
| 54 |  | #include "applications/dynamicProps/VCorrFunc.hpp" | 
| 55 |  | #include "applications/dynamicProps/LegendreCorrFunc.hpp" | 
| 56 | + | #include "applications/dynamicProps/RadialRCorrFunc.hpp" | 
| 57 | + | #include "applications/dynamicProps/ThetaCorrFunc.hpp" | 
| 58 | + | #include "applications/dynamicProps/DirectionalRCorrFunc.hpp" | 
| 59 | + | #include "applications/dynamicProps/EnergyCorrFunc.hpp" | 
| 60 |  |  | 
| 61 |  |  | 
| 62 |  | using namespace oopse; | 
| 76 |  |  | 
| 77 |  | //get the dumpfile name and meta-data file name | 
| 78 |  | std::string dumpFileName = args_info.input_arg; | 
| 75 | – |  | 
| 76 | – | std::string mdFileName = dumpFileName.substr(0, dumpFileName.rfind(".")) + ".md"; | 
| 77 | – |  | 
| 79 |  |  | 
| 80 |  | std::string sele1; | 
| 81 |  | std::string sele2; | 
| 108 |  |  | 
| 109 |  | //parse md file and set up the system | 
| 110 |  | SimCreator creator; | 
| 111 | < | SimInfo* info = creator.createSim(mdFileName, false); | 
| 111 | > | SimInfo* info = creator.createSim(dumpFileName, false); | 
| 112 |  |  | 
| 113 |  |  | 
| 114 |  | TimeCorrFunc* corrFunc; | 
| 116 |  | corrFunc = new DipoleCorrFunc(info, dumpFileName, sele1, sele2); | 
| 117 |  | } else if (args_info.rcorr_given) { | 
| 118 |  | corrFunc = new RCorrFunc(info, dumpFileName, sele1, sele2); | 
| 119 | < | } | 
| 120 | < | else if (args_info.vcorr_given) { | 
| 119 | > | } else if (args_info.r_rcorr_given) { | 
| 120 | > | corrFunc = new RadialRCorrFunc(info, dumpFileName, sele1, sele2); | 
| 121 | > | } else if (args_info.thetacorr_given) { | 
| 122 | > | corrFunc = new ThetaCorrFunc(info, dumpFileName, sele1, sele2); | 
| 123 | > | } else if (args_info.drcorr_given) { | 
| 124 | > | corrFunc = new DirectionalRCorrFunc(info, dumpFileName, sele1, sele2); | 
| 125 | > | } else if (args_info.vcorr_given) { | 
| 126 |  | corrFunc = new VCorrFunc(info, dumpFileName, sele1, sele2); | 
| 127 | + | } else if (args_info.helfandEcorr_given){ | 
| 128 | + | corrFunc = new EnergyCorrFunc(info, dumpFileName, sele1, sele2); | 
| 129 |  | } else if (args_info.lcorr_given) { | 
| 130 |  | int order; | 
| 131 |  | if (args_info.order_given) |