| 1 | /* | 
| 2 | File autogenerated by gengetopt version 2.15 | 
| 3 | generated with the following command: | 
| 4 | gengetopt -i DynamicProps.ggo --file-name=DynamicPropsCmd | 
| 5 |  | 
| 6 | The developers of gengetopt consider the fixed text that goes in all | 
| 7 | gengetopt output files to be in the public domain: | 
| 8 | we make no copyright claims on it. | 
| 9 | */ | 
| 10 |  | 
| 11 | /* If we use autoconf.  */ | 
| 12 | #ifdef HAVE_CONFIG_H | 
| 13 | #include "config.h" | 
| 14 | #endif | 
| 15 |  | 
| 16 | #include <stdio.h> | 
| 17 | #include <stdlib.h> | 
| 18 | #include <string.h> | 
| 19 |  | 
| 20 | #include "getopt.h" | 
| 21 |  | 
| 22 | #include "DynamicPropsCmd.h" | 
| 23 |  | 
| 24 | static | 
| 25 | void clear_given (struct gengetopt_args_info *args_info); | 
| 26 | static | 
| 27 | void clear_args (struct gengetopt_args_info *args_info); | 
| 28 |  | 
| 29 | static int | 
| 30 | cmdline_parser_internal (int argc, char * const *argv, struct gengetopt_args_info *args_info, int override, int initialize, int check_required, const char *additional_error); | 
| 31 |  | 
| 32 | static int | 
| 33 | cmdline_parser_required2 (struct gengetopt_args_info *args_info, const char *prog_name, const char *additional_error); | 
| 34 |  | 
| 35 | static char * | 
| 36 | gengetopt_strdup (const char *s); | 
| 37 |  | 
| 38 | static | 
| 39 | void clear_given (struct gengetopt_args_info *args_info) | 
| 40 | { | 
| 41 | args_info->help_given = 0 ; | 
| 42 | args_info->version_given = 0 ; | 
| 43 | args_info->input_given = 0 ; | 
| 44 | args_info->output_given = 0 ; | 
| 45 | args_info->sele1_given = 0 ; | 
| 46 | args_info->sele2_given = 0 ; | 
| 47 | args_info->order_given = 0 ; | 
| 48 | args_info->rcorr_given = 0 ; | 
| 49 | args_info->vcorr_given = 0 ; | 
| 50 | args_info->dcorr_given = 0 ; | 
| 51 | args_info->lcorr_given = 0 ; | 
| 52 | args_info->r_rcorr_given = 0 ; | 
| 53 | args_info->dynamicProps_group_counter = 0 ; | 
| 54 | } | 
| 55 |  | 
| 56 | static | 
| 57 | void clear_args (struct gengetopt_args_info *args_info) | 
| 58 | { | 
| 59 | args_info->input_arg = NULL; | 
| 60 | args_info->input_orig = NULL; | 
| 61 | args_info->output_arg = NULL; | 
| 62 | args_info->output_orig = NULL; | 
| 63 | args_info->sele1_arg = NULL; | 
| 64 | args_info->sele1_orig = NULL; | 
| 65 | args_info->sele2_arg = NULL; | 
| 66 | args_info->sele2_orig = NULL; | 
| 67 | args_info->order_orig = NULL; | 
| 68 |  | 
| 69 | } | 
| 70 |  | 
| 71 | void | 
| 72 | cmdline_parser_print_version (void) | 
| 73 | { | 
| 74 | printf ("%s %s\n", CMDLINE_PARSER_PACKAGE, CMDLINE_PARSER_VERSION); | 
| 75 | } | 
| 76 |  | 
| 77 | void | 
| 78 | cmdline_parser_print_help (void) | 
| 79 | { | 
| 80 | cmdline_parser_print_version (); | 
| 81 | printf("\nUsage: DynamicProps [OPTIONS]...\n\n"); | 
| 82 | printf("%s\n","  -h, --help                    Print help and exit"); | 
| 83 | printf("%s\n","  -V, --version                 Print version and exit"); | 
| 84 | printf("%s\n","  -i, --input=filename          input dump file"); | 
| 85 | printf("%s\n","  -o, --output=filename         output file name"); | 
| 86 | printf("%s\n","      --sele1=selection script  select first stuntdouble set"); | 
| 87 | printf("%s\n","      --sele2=selection script  select second stuntdouble set (if sele2 is not \n                                  set, use script from sele1)"); | 
| 88 | printf("%s\n","      --order=INT               Lengendre Polynomial Order"); | 
| 89 | printf("%s\n","\n Group: dynamicProps\n   an option of this group is required"); | 
| 90 | printf("%s\n","  -r, --rcorr                   rmsd"); | 
| 91 | printf("%s\n","  -v, --vcorr                   velocity correlation function"); | 
| 92 | printf("%s\n","  -d, --dcorr                   dipole correlation function"); | 
| 93 | printf("%s\n","  -l, --lcorr                   Lengendre correlation function"); | 
| 94 | printf("%s\n","      --r_rcorr                 Radial rmsd"); | 
| 95 |  | 
| 96 | } | 
| 97 |  | 
| 98 | void | 
| 99 | cmdline_parser_init (struct gengetopt_args_info *args_info) | 
| 100 | { | 
| 101 | clear_given (args_info); | 
| 102 | clear_args (args_info); | 
| 103 | } | 
| 104 |  | 
| 105 | static void | 
| 106 | cmdline_parser_release (struct gengetopt_args_info *args_info) | 
| 107 | { | 
| 108 |  | 
| 109 | if (args_info->input_arg) | 
| 110 | { | 
| 111 | free (args_info->input_arg); /* free previous argument */ | 
| 112 | args_info->input_arg = 0; | 
| 113 | } | 
| 114 | if (args_info->input_orig) | 
| 115 | { | 
| 116 | free (args_info->input_orig); /* free previous argument */ | 
| 117 | args_info->input_orig = 0; | 
| 118 | } | 
| 119 | if (args_info->output_arg) | 
| 120 | { | 
| 121 | free (args_info->output_arg); /* free previous argument */ | 
| 122 | args_info->output_arg = 0; | 
| 123 | } | 
| 124 | if (args_info->output_orig) | 
| 125 | { | 
| 126 | free (args_info->output_orig); /* free previous argument */ | 
| 127 | args_info->output_orig = 0; | 
| 128 | } | 
| 129 | if (args_info->sele1_arg) | 
| 130 | { | 
| 131 | free (args_info->sele1_arg); /* free previous argument */ | 
| 132 | args_info->sele1_arg = 0; | 
| 133 | } | 
| 134 | if (args_info->sele1_orig) | 
| 135 | { | 
| 136 | free (args_info->sele1_orig); /* free previous argument */ | 
| 137 | args_info->sele1_orig = 0; | 
| 138 | } | 
| 139 | if (args_info->sele2_arg) | 
| 140 | { | 
| 141 | free (args_info->sele2_arg); /* free previous argument */ | 
| 142 | args_info->sele2_arg = 0; | 
| 143 | } | 
| 144 | if (args_info->sele2_orig) | 
| 145 | { | 
| 146 | free (args_info->sele2_orig); /* free previous argument */ | 
| 147 | args_info->sele2_orig = 0; | 
| 148 | } | 
| 149 | if (args_info->order_orig) | 
| 150 | { | 
| 151 | free (args_info->order_orig); /* free previous argument */ | 
| 152 | args_info->order_orig = 0; | 
| 153 | } | 
| 154 |  | 
| 155 | clear_given (args_info); | 
| 156 | } | 
| 157 |  | 
| 158 | int | 
| 159 | cmdline_parser_file_save(const char *filename, struct gengetopt_args_info *args_info) | 
| 160 | { | 
| 161 | FILE *outfile; | 
| 162 | int i = 0; | 
| 163 |  | 
| 164 | outfile = fopen(filename, "w"); | 
| 165 |  | 
| 166 | if (!outfile) | 
| 167 | { | 
| 168 | fprintf (stderr, "%s: cannot open file for writing: %s\n", CMDLINE_PARSER_PACKAGE, filename); | 
| 169 | return EXIT_FAILURE; | 
| 170 | } | 
| 171 |  | 
| 172 | if (args_info->help_given) { | 
| 173 | fprintf(outfile, "%s\n", "help"); | 
| 174 | } | 
| 175 | if (args_info->version_given) { | 
| 176 | fprintf(outfile, "%s\n", "version"); | 
| 177 | } | 
| 178 | if (args_info->input_given) { | 
| 179 | if (args_info->input_orig) { | 
| 180 | fprintf(outfile, "%s=\"%s\"\n", "input", args_info->input_orig); | 
| 181 | } else { | 
| 182 | fprintf(outfile, "%s\n", "input"); | 
| 183 | } | 
| 184 | } | 
| 185 | if (args_info->output_given) { | 
| 186 | if (args_info->output_orig) { | 
| 187 | fprintf(outfile, "%s=\"%s\"\n", "output", args_info->output_orig); | 
| 188 | } else { | 
| 189 | fprintf(outfile, "%s\n", "output"); | 
| 190 | } | 
| 191 | } | 
| 192 | if (args_info->sele1_given) { | 
| 193 | if (args_info->sele1_orig) { | 
| 194 | fprintf(outfile, "%s=\"%s\"\n", "sele1", args_info->sele1_orig); | 
| 195 | } else { | 
| 196 | fprintf(outfile, "%s\n", "sele1"); | 
| 197 | } | 
| 198 | } | 
| 199 | if (args_info->sele2_given) { | 
| 200 | if (args_info->sele2_orig) { | 
| 201 | fprintf(outfile, "%s=\"%s\"\n", "sele2", args_info->sele2_orig); | 
| 202 | } else { | 
| 203 | fprintf(outfile, "%s\n", "sele2"); | 
| 204 | } | 
| 205 | } | 
| 206 | if (args_info->order_given) { | 
| 207 | if (args_info->order_orig) { | 
| 208 | fprintf(outfile, "%s=\"%s\"\n", "order", args_info->order_orig); | 
| 209 | } else { | 
| 210 | fprintf(outfile, "%s\n", "order"); | 
| 211 | } | 
| 212 | } | 
| 213 | if (args_info->rcorr_given) { | 
| 214 | fprintf(outfile, "%s\n", "rcorr"); | 
| 215 | } | 
| 216 | if (args_info->vcorr_given) { | 
| 217 | fprintf(outfile, "%s\n", "vcorr"); | 
| 218 | } | 
| 219 | if (args_info->dcorr_given) { | 
| 220 | fprintf(outfile, "%s\n", "dcorr"); | 
| 221 | } | 
| 222 | if (args_info->lcorr_given) { | 
| 223 | fprintf(outfile, "%s\n", "lcorr"); | 
| 224 | } | 
| 225 | if (args_info->r_rcorr_given) { | 
| 226 | fprintf(outfile, "%s\n", "r_rcorr"); | 
| 227 | } | 
| 228 |  | 
| 229 | fclose (outfile); | 
| 230 |  | 
| 231 | i = EXIT_SUCCESS; | 
| 232 | return i; | 
| 233 | } | 
| 234 |  | 
| 235 | void | 
| 236 | cmdline_parser_free (struct gengetopt_args_info *args_info) | 
| 237 | { | 
| 238 | cmdline_parser_release (args_info); | 
| 239 | } | 
| 240 |  | 
| 241 |  | 
| 242 | /* gengetopt_strdup() */ | 
| 243 | /* strdup.c replacement of strdup, which is not standard */ | 
| 244 | char * | 
| 245 | gengetopt_strdup (const char *s) | 
| 246 | { | 
| 247 | char *result = NULL; | 
| 248 | if (!s) | 
| 249 | return result; | 
| 250 |  | 
| 251 | result = (char*)malloc(strlen(s) + 1); | 
| 252 | if (result == (char*)0) | 
| 253 | return (char*)0; | 
| 254 | strcpy(result, s); | 
| 255 | return result; | 
| 256 | } | 
| 257 |  | 
| 258 | static void | 
| 259 | reset_group_dynamicProps(struct gengetopt_args_info *args_info); | 
| 260 |  | 
| 261 | static void | 
| 262 | reset_group_dynamicProps(struct gengetopt_args_info *args_info) | 
| 263 | { | 
| 264 | if (! args_info->dynamicProps_group_counter) | 
| 265 | return; | 
| 266 |  | 
| 267 | args_info->rcorr_given = 0 ; | 
| 268 | args_info->vcorr_given = 0 ; | 
| 269 | args_info->dcorr_given = 0 ; | 
| 270 | args_info->lcorr_given = 0 ; | 
| 271 | args_info->r_rcorr_given = 0 ; | 
| 272 |  | 
| 273 | args_info->dynamicProps_group_counter = 0; | 
| 274 | } | 
| 275 |  | 
| 276 | int | 
| 277 | cmdline_parser (int argc, char * const *argv, struct gengetopt_args_info *args_info) | 
| 278 | { | 
| 279 | return cmdline_parser2 (argc, argv, args_info, 0, 1, 1); | 
| 280 | } | 
| 281 |  | 
| 282 | int | 
| 283 | cmdline_parser2 (int argc, char * const *argv, struct gengetopt_args_info *args_info, int override, int initialize, int check_required) | 
| 284 | { | 
| 285 | int result; | 
| 286 |  | 
| 287 | result = cmdline_parser_internal (argc, argv, args_info, override, initialize, check_required, NULL); | 
| 288 |  | 
| 289 | if (result == EXIT_FAILURE) | 
| 290 | { | 
| 291 | cmdline_parser_free (args_info); | 
| 292 | exit (EXIT_FAILURE); | 
| 293 | } | 
| 294 |  | 
| 295 | return result; | 
| 296 | } | 
| 297 |  | 
| 298 | int | 
| 299 | cmdline_parser_required (struct gengetopt_args_info *args_info, const char *prog_name) | 
| 300 | { | 
| 301 | int result = EXIT_SUCCESS; | 
| 302 |  | 
| 303 | if (cmdline_parser_required2(args_info, prog_name, NULL) > 0) | 
| 304 | result = EXIT_FAILURE; | 
| 305 |  | 
| 306 | if (result == EXIT_FAILURE) | 
| 307 | { | 
| 308 | cmdline_parser_free (args_info); | 
| 309 | exit (EXIT_FAILURE); | 
| 310 | } | 
| 311 |  | 
| 312 | return result; | 
| 313 | } | 
| 314 |  | 
| 315 | int | 
| 316 | cmdline_parser_required2 (struct gengetopt_args_info *args_info, const char *prog_name, const char *additional_error) | 
| 317 | { | 
| 318 | int error = 0; | 
| 319 |  | 
| 320 | if (! args_info->input_given) | 
| 321 | { | 
| 322 | fprintf (stderr, "%s: '--input' ('-i') option required%s\n", prog_name, (additional_error ? additional_error : "")); | 
| 323 | error = 1; | 
| 324 | } | 
| 325 | if (args_info->dynamicProps_group_counter == 0) | 
| 326 | { | 
| 327 | fprintf (stderr, "%s: %d options of group dynamicProps were given. One is required.%s\n", prog_name, args_info->dynamicProps_group_counter, (additional_error ? additional_error : "")); | 
| 328 | error = 1; | 
| 329 | } | 
| 330 |  | 
| 331 |  | 
| 332 | return error; | 
| 333 | } | 
| 334 |  | 
| 335 | int | 
| 336 | cmdline_parser_internal (int argc, char * const *argv, struct gengetopt_args_info *args_info, int override, int initialize, int check_required, const char *additional_error) | 
| 337 | { | 
| 338 | int c;        /* Character of the parsed option.  */ | 
| 339 |  | 
| 340 | int error = 0; | 
| 341 | struct gengetopt_args_info local_args_info; | 
| 342 |  | 
| 343 | if (initialize) | 
| 344 | cmdline_parser_init (args_info); | 
| 345 |  | 
| 346 | cmdline_parser_init (&local_args_info); | 
| 347 |  | 
| 348 | optarg = 0; | 
| 349 | optind = 1; | 
| 350 | opterr = 1; | 
| 351 | optopt = '?'; | 
| 352 |  | 
| 353 | while (1) | 
| 354 | { | 
| 355 | int option_index = 0; | 
| 356 | char *stop_char; | 
| 357 |  | 
| 358 | static struct option long_options[] = { | 
| 359 | { "help",       0, NULL, 'h' }, | 
| 360 | { "version",    0, NULL, 'V' }, | 
| 361 | { "input",      1, NULL, 'i' }, | 
| 362 | { "output",     1, NULL, 'o' }, | 
| 363 | { "sele1",      1, NULL, 0 }, | 
| 364 | { "sele2",      1, NULL, 0 }, | 
| 365 | { "order",      1, NULL, 0 }, | 
| 366 | { "rcorr",      0, NULL, 'r' }, | 
| 367 | { "vcorr",      0, NULL, 'v' }, | 
| 368 | { "dcorr",      0, NULL, 'd' }, | 
| 369 | { "lcorr",      0, NULL, 'l' }, | 
| 370 | { "r_rcorr",    0, NULL, 0 }, | 
| 371 | { NULL, 0, NULL, 0 } | 
| 372 | }; | 
| 373 |  | 
| 374 | stop_char = 0; | 
| 375 | c = getopt_long (argc, argv, "hVi:o:rvdl", long_options, &option_index); | 
| 376 |  | 
| 377 | if (c == -1) break;       /* Exit from `while (1)' loop.  */ | 
| 378 |  | 
| 379 | switch (c) | 
| 380 | { | 
| 381 | case 'h':       /* Print help and exit.  */ | 
| 382 | cmdline_parser_print_help (); | 
| 383 | cmdline_parser_free (&local_args_info); | 
| 384 | exit (EXIT_SUCCESS); | 
| 385 |  | 
| 386 | case 'V':       /* Print version and exit.  */ | 
| 387 | cmdline_parser_print_version (); | 
| 388 | cmdline_parser_free (&local_args_info); | 
| 389 | exit (EXIT_SUCCESS); | 
| 390 |  | 
| 391 | case 'i':       /* input dump file.  */ | 
| 392 | if (local_args_info.input_given) | 
| 393 | { | 
| 394 | fprintf (stderr, "%s: `--input' (`-i') option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); | 
| 395 | goto failure; | 
| 396 | } | 
| 397 | if (args_info->input_given && ! override) | 
| 398 | continue; | 
| 399 | local_args_info.input_given = 1; | 
| 400 | args_info->input_given = 1; | 
| 401 | if (args_info->input_arg) | 
| 402 | free (args_info->input_arg); /* free previous string */ | 
| 403 | args_info->input_arg = gengetopt_strdup (optarg); | 
| 404 | if (args_info->input_orig) | 
| 405 | free (args_info->input_orig); /* free previous string */ | 
| 406 | args_info->input_orig = gengetopt_strdup (optarg); | 
| 407 | break; | 
| 408 |  | 
| 409 | case 'o':       /* output file name.  */ | 
| 410 | if (local_args_info.output_given) | 
| 411 | { | 
| 412 | fprintf (stderr, "%s: `--output' (`-o') option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); | 
| 413 | goto failure; | 
| 414 | } | 
| 415 | if (args_info->output_given && ! override) | 
| 416 | continue; | 
| 417 | local_args_info.output_given = 1; | 
| 418 | args_info->output_given = 1; | 
| 419 | if (args_info->output_arg) | 
| 420 | free (args_info->output_arg); /* free previous string */ | 
| 421 | args_info->output_arg = gengetopt_strdup (optarg); | 
| 422 | if (args_info->output_orig) | 
| 423 | free (args_info->output_orig); /* free previous string */ | 
| 424 | args_info->output_orig = gengetopt_strdup (optarg); | 
| 425 | break; | 
| 426 |  | 
| 427 | case 'r':       /* rmsd.  */ | 
| 428 | if (local_args_info.rcorr_given) | 
| 429 | { | 
| 430 | fprintf (stderr, "%s: `--rcorr' (`-r') option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); | 
| 431 | goto failure; | 
| 432 | } | 
| 433 | if (args_info->rcorr_given && ! override) | 
| 434 | continue; | 
| 435 | local_args_info.rcorr_given = 1; | 
| 436 | args_info->rcorr_given = 1; | 
| 437 | if (args_info->dynamicProps_group_counter && override) | 
| 438 | reset_group_dynamicProps (args_info); | 
| 439 | args_info->dynamicProps_group_counter += 1; | 
| 440 | break; | 
| 441 |  | 
| 442 | case 'v':       /* velocity correlation function.  */ | 
| 443 | if (local_args_info.vcorr_given) | 
| 444 | { | 
| 445 | fprintf (stderr, "%s: `--vcorr' (`-v') option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); | 
| 446 | goto failure; | 
| 447 | } | 
| 448 | if (args_info->vcorr_given && ! override) | 
| 449 | continue; | 
| 450 | local_args_info.vcorr_given = 1; | 
| 451 | args_info->vcorr_given = 1; | 
| 452 | if (args_info->dynamicProps_group_counter && override) | 
| 453 | reset_group_dynamicProps (args_info); | 
| 454 | args_info->dynamicProps_group_counter += 1; | 
| 455 | break; | 
| 456 |  | 
| 457 | case 'd':       /* dipole correlation function.  */ | 
| 458 | if (local_args_info.dcorr_given) | 
| 459 | { | 
| 460 | fprintf (stderr, "%s: `--dcorr' (`-d') option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); | 
| 461 | goto failure; | 
| 462 | } | 
| 463 | if (args_info->dcorr_given && ! override) | 
| 464 | continue; | 
| 465 | local_args_info.dcorr_given = 1; | 
| 466 | args_info->dcorr_given = 1; | 
| 467 | if (args_info->dynamicProps_group_counter && override) | 
| 468 | reset_group_dynamicProps (args_info); | 
| 469 | args_info->dynamicProps_group_counter += 1; | 
| 470 | break; | 
| 471 |  | 
| 472 | case 'l':       /* Lengendre correlation function.  */ | 
| 473 | if (local_args_info.lcorr_given) | 
| 474 | { | 
| 475 | fprintf (stderr, "%s: `--lcorr' (`-l') option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); | 
| 476 | goto failure; | 
| 477 | } | 
| 478 | if (args_info->lcorr_given && ! override) | 
| 479 | continue; | 
| 480 | local_args_info.lcorr_given = 1; | 
| 481 | args_info->lcorr_given = 1; | 
| 482 | if (args_info->dynamicProps_group_counter && override) | 
| 483 | reset_group_dynamicProps (args_info); | 
| 484 | args_info->dynamicProps_group_counter += 1; | 
| 485 | break; | 
| 486 |  | 
| 487 |  | 
| 488 | case 0: /* Long option with no short option */ | 
| 489 | /* select first stuntdouble set.  */ | 
| 490 | if (strcmp (long_options[option_index].name, "sele1") == 0) | 
| 491 | { | 
| 492 | if (local_args_info.sele1_given) | 
| 493 | { | 
| 494 | fprintf (stderr, "%s: `--sele1' option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); | 
| 495 | goto failure; | 
| 496 | } | 
| 497 | if (args_info->sele1_given && ! override) | 
| 498 | continue; | 
| 499 | local_args_info.sele1_given = 1; | 
| 500 | args_info->sele1_given = 1; | 
| 501 | if (args_info->sele1_arg) | 
| 502 | free (args_info->sele1_arg); /* free previous string */ | 
| 503 | args_info->sele1_arg = gengetopt_strdup (optarg); | 
| 504 | if (args_info->sele1_orig) | 
| 505 | free (args_info->sele1_orig); /* free previous string */ | 
| 506 | args_info->sele1_orig = gengetopt_strdup (optarg); | 
| 507 | } | 
| 508 | /* select second stuntdouble set (if sele2 is not set, use script from sele1).  */ | 
| 509 | else if (strcmp (long_options[option_index].name, "sele2") == 0) | 
| 510 | { | 
| 511 | if (local_args_info.sele2_given) | 
| 512 | { | 
| 513 | fprintf (stderr, "%s: `--sele2' option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); | 
| 514 | goto failure; | 
| 515 | } | 
| 516 | if (args_info->sele2_given && ! override) | 
| 517 | continue; | 
| 518 | local_args_info.sele2_given = 1; | 
| 519 | args_info->sele2_given = 1; | 
| 520 | if (args_info->sele2_arg) | 
| 521 | free (args_info->sele2_arg); /* free previous string */ | 
| 522 | args_info->sele2_arg = gengetopt_strdup (optarg); | 
| 523 | if (args_info->sele2_orig) | 
| 524 | free (args_info->sele2_orig); /* free previous string */ | 
| 525 | args_info->sele2_orig = gengetopt_strdup (optarg); | 
| 526 | } | 
| 527 | /* Lengendre Polynomial Order.  */ | 
| 528 | else if (strcmp (long_options[option_index].name, "order") == 0) | 
| 529 | { | 
| 530 | if (local_args_info.order_given) | 
| 531 | { | 
| 532 | fprintf (stderr, "%s: `--order' option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); | 
| 533 | goto failure; | 
| 534 | } | 
| 535 | if (args_info->order_given && ! override) | 
| 536 | continue; | 
| 537 | local_args_info.order_given = 1; | 
| 538 | args_info->order_given = 1; | 
| 539 | args_info->order_arg = strtol (optarg, &stop_char, 0); | 
| 540 | if (!(stop_char && *stop_char == '\0')) { | 
| 541 | fprintf(stderr, "%s: invalid numeric value: %s\n", argv[0], optarg); | 
| 542 | goto failure; | 
| 543 | } | 
| 544 | if (args_info->order_orig) | 
| 545 | free (args_info->order_orig); /* free previous string */ | 
| 546 | args_info->order_orig = gengetopt_strdup (optarg); | 
| 547 | } | 
| 548 | /* Radial rmsd.  */ | 
| 549 | else if (strcmp (long_options[option_index].name, "r_rcorr") == 0) | 
| 550 | { | 
| 551 | if (local_args_info.r_rcorr_given) | 
| 552 | { | 
| 553 | fprintf (stderr, "%s: `--r_rcorr' option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); | 
| 554 | goto failure; | 
| 555 | } | 
| 556 | if (args_info->r_rcorr_given && ! override) | 
| 557 | continue; | 
| 558 | local_args_info.r_rcorr_given = 1; | 
| 559 | args_info->r_rcorr_given = 1; | 
| 560 | if (args_info->dynamicProps_group_counter && override) | 
| 561 | reset_group_dynamicProps (args_info); | 
| 562 | args_info->dynamicProps_group_counter += 1; | 
| 563 | break; | 
| 564 | } | 
| 565 |  | 
| 566 | break; | 
| 567 | case '?':       /* Invalid option.  */ | 
| 568 | /* `getopt_long' already printed an error message.  */ | 
| 569 | goto failure; | 
| 570 |  | 
| 571 | default:        /* bug: option not considered.  */ | 
| 572 | fprintf (stderr, "%s: option unknown: %c%s\n", CMDLINE_PARSER_PACKAGE, c, (additional_error ? additional_error : "")); | 
| 573 | abort (); | 
| 574 | } /* switch */ | 
| 575 | } /* while */ | 
| 576 |  | 
| 577 | if (args_info->dynamicProps_group_counter > 1) | 
| 578 | { | 
| 579 | fprintf (stderr, "%s: %d options of group dynamicProps were given. One is required.%s\n", argv[0], args_info->dynamicProps_group_counter, (additional_error ? additional_error : "")); | 
| 580 | error = 1; | 
| 581 | } | 
| 582 |  | 
| 583 |  | 
| 584 |  | 
| 585 | if (check_required) | 
| 586 | { | 
| 587 | error += cmdline_parser_required2 (args_info, argv[0], additional_error); | 
| 588 | } | 
| 589 |  | 
| 590 | cmdline_parser_release (&local_args_info); | 
| 591 |  | 
| 592 | if ( error ) | 
| 593 | return (EXIT_FAILURE); | 
| 594 |  | 
| 595 | return 0; | 
| 596 |  | 
| 597 | failure: | 
| 598 |  | 
| 599 | cmdline_parser_release (&local_args_info); | 
| 600 | return (EXIT_FAILURE); | 
| 601 | } |