# | Line 1 | Line 1 | |
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1 | /* | |
2 | File autogenerated by gengetopt version 2.22.4 | |
3 | generated with the following command: | |
4 | < | gengetopt -F DynamicPropsCmd -u |
4 | > | gengetopt --file-name=DynamicPropsCmd --unamed-opts |
5 | ||
6 | The developers of gengetopt consider the fixed text that goes in all | |
7 | gengetopt output files to be in the public domain: | |
# | Line 21 | Line 21 | |
21 | #define FIX_UNUSED(X) (void) (X) /* avoid warnings for unused params */ | |
22 | #endif | |
23 | ||
24 | + | #ifdef WIN32 |
25 | + | #include "utils/wingetopt.h" |
26 | + | #else |
27 | #include <getopt.h> | |
28 | + | #endif |
29 | ||
30 | #include "DynamicPropsCmd.h" | |
31 | ||
# | Line 41 | Line 45 | const char *gengetopt_args_info_help[] = { | |
45 | " --order=INT Lengendre Polynomial Order", | |
46 | " -m, --memory=memory specification\n Available memory (defaults to 2G) \n (default=`2G')", | |
47 | "\n Group: dynamicProps\n an option of this group is required", | |
48 | + | " -s, --selecorr selection correlation function", |
49 | " -r, --rcorr rmsd", | |
50 | " -v, --vcorr velocity correlation function", | |
51 | " -d, --dcorr dipole correlation function", | |
52 | " -l, --lcorr Lengendre correlation function", | |
53 | < | " -s, --sdcorr System dipole correlation function", |
53 | > | " -M, --sdcorr System dipole correlation function", |
54 | " --r_rcorr Radial rmsd", | |
55 | " --thetacorr Angular rmsd", | |
56 | " --drcorr Directional rmsd for particles with unit \n vectors", | |
# | Line 86 | Line 91 | void clear_given (struct gengetopt_args_info *args_inf | |
91 | args_info->sele2_given = 0 ; | |
92 | args_info->order_given = 0 ; | |
93 | args_info->memory_given = 0 ; | |
94 | + | args_info->selecorr_given = 0 ; |
95 | args_info->rcorr_given = 0 ; | |
96 | args_info->vcorr_given = 0 ; | |
97 | args_info->dcorr_given = 0 ; | |
# | Line 131 | Line 137 | void init_args_info(struct gengetopt_args_info *args_i | |
137 | args_info->sele2_help = gengetopt_args_info_help[5] ; | |
138 | args_info->order_help = gengetopt_args_info_help[6] ; | |
139 | args_info->memory_help = gengetopt_args_info_help[7] ; | |
140 | < | args_info->rcorr_help = gengetopt_args_info_help[9] ; |
141 | < | args_info->vcorr_help = gengetopt_args_info_help[10] ; |
142 | < | args_info->dcorr_help = gengetopt_args_info_help[11] ; |
143 | < | args_info->lcorr_help = gengetopt_args_info_help[12] ; |
144 | < | args_info->sdcorr_help = gengetopt_args_info_help[13] ; |
145 | < | args_info->r_rcorr_help = gengetopt_args_info_help[14] ; |
146 | < | args_info->thetacorr_help = gengetopt_args_info_help[15] ; |
147 | < | args_info->drcorr_help = gengetopt_args_info_help[16] ; |
148 | < | args_info->helfandEcorr_help = gengetopt_args_info_help[17] ; |
149 | < | args_info->momentum_help = gengetopt_args_info_help[18] ; |
150 | < | args_info->stresscorr_help = gengetopt_args_info_help[19] ; |
140 | > | args_info->selecorr_help = gengetopt_args_info_help[9] ; |
141 | > | args_info->rcorr_help = gengetopt_args_info_help[10] ; |
142 | > | args_info->vcorr_help = gengetopt_args_info_help[11] ; |
143 | > | args_info->dcorr_help = gengetopt_args_info_help[12] ; |
144 | > | args_info->lcorr_help = gengetopt_args_info_help[13] ; |
145 | > | args_info->sdcorr_help = gengetopt_args_info_help[14] ; |
146 | > | args_info->r_rcorr_help = gengetopt_args_info_help[15] ; |
147 | > | args_info->thetacorr_help = gengetopt_args_info_help[16] ; |
148 | > | args_info->drcorr_help = gengetopt_args_info_help[17] ; |
149 | > | args_info->helfandEcorr_help = gengetopt_args_info_help[18] ; |
150 | > | args_info->momentum_help = gengetopt_args_info_help[19] ; |
151 | > | args_info->stresscorr_help = gengetopt_args_info_help[20] ; |
152 | ||
153 | } | |
154 | ||
# | Line 287 | Line 294 | cmdline_parser_dump(FILE *outfile, struct gengetopt_ar | |
294 | write_into_file(outfile, "order", args_info->order_orig, 0); | |
295 | if (args_info->memory_given) | |
296 | write_into_file(outfile, "memory", args_info->memory_orig, 0); | |
297 | + | if (args_info->selecorr_given) |
298 | + | write_into_file(outfile, "selecorr", 0, 0 ); |
299 | if (args_info->rcorr_given) | |
300 | write_into_file(outfile, "rcorr", 0, 0 ); | |
301 | if (args_info->vcorr_given) | |
# | Line 362 | Line 371 | reset_group_dynamicProps(struct gengetopt_args_info *a | |
371 | if (! args_info->dynamicProps_group_counter) | |
372 | return; | |
373 | ||
374 | + | args_info->selecorr_given = 0 ; |
375 | args_info->rcorr_given = 0 ; | |
376 | args_info->vcorr_given = 0 ; | |
377 | args_info->dcorr_given = 0 ; | |
# | Line 622 | Line 632 | cmdline_parser_internal ( | |
632 | { "sele2", 1, NULL, 0 }, | |
633 | { "order", 1, NULL, 0 }, | |
634 | { "memory", 1, NULL, 'm' }, | |
635 | + | { "selecorr", 0, NULL, 's' }, |
636 | { "rcorr", 0, NULL, 'r' }, | |
637 | { "vcorr", 0, NULL, 'v' }, | |
638 | { "dcorr", 0, NULL, 'd' }, | |
639 | { "lcorr", 0, NULL, 'l' }, | |
640 | < | { "sdcorr", 0, NULL, 's' }, |
640 | > | { "sdcorr", 0, NULL, 'M' }, |
641 | { "r_rcorr", 0, NULL, 0 }, | |
642 | { "thetacorr", 0, NULL, 0 }, | |
643 | { "drcorr", 0, NULL, 0 }, | |
# | Line 636 | Line 647 | cmdline_parser_internal ( | |
647 | { 0, 0, 0, 0 } | |
648 | }; | |
649 | ||
650 | < | c = getopt_long (argc, argv, "hVi:o:m:rvdlsp", long_options, &option_index); |
650 | > | c = getopt_long (argc, argv, "hVi:o:m:srvdlMp", long_options, &option_index); |
651 | ||
652 | if (c == -1) break; /* Exit from `while (1)' loop. */ | |
653 | ||
# | Line 688 | Line 699 | cmdline_parser_internal ( | |
699 | goto failure; | |
700 | ||
701 | break; | |
702 | + | case 's': /* selection correlation function. */ |
703 | + | |
704 | + | if (args_info->dynamicProps_group_counter && override) |
705 | + | reset_group_dynamicProps (args_info); |
706 | + | args_info->dynamicProps_group_counter += 1; |
707 | + | |
708 | + | if (update_arg( 0 , |
709 | + | 0 , &(args_info->selecorr_given), |
710 | + | &(local_args_info.selecorr_given), optarg, 0, 0, ARG_NO, |
711 | + | check_ambiguity, override, 0, 0, |
712 | + | "selecorr", 's', |
713 | + | additional_error)) |
714 | + | goto failure; |
715 | + | |
716 | + | break; |
717 | case 'r': /* rmsd. */ | |
718 | ||
719 | if (args_info->dynamicProps_group_counter && override) | |
# | Line 748 | Line 774 | cmdline_parser_internal ( | |
774 | goto failure; | |
775 | ||
776 | break; | |
777 | < | case 's': /* System dipole correlation function. */ |
777 | > | case 'M': /* System dipole correlation function. */ |
778 | ||
779 | if (args_info->dynamicProps_group_counter && override) | |
780 | reset_group_dynamicProps (args_info); | |
# | Line 758 | Line 784 | cmdline_parser_internal ( | |
784 | 0 , &(args_info->sdcorr_given), | |
785 | &(local_args_info.sdcorr_given), optarg, 0, 0, ARG_NO, | |
786 | check_ambiguity, override, 0, 0, | |
787 | < | "sdcorr", 's', |
787 | > | "sdcorr", 'M', |
788 | additional_error)) | |
789 | goto failure; | |
790 |
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