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/* DynamicPropsCmd.h */ | 
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/** @file DynamicPropsCmd.h | 
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 *  @brief The header file for the command line option parser | 
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 *  generated by GNU Gengetopt version 2.22.4 | 
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 *  http://www.gnu.org/software/gengetopt. | 
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 *  DO NOT modify this file, since it can be overwritten | 
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 *  @author GNU Gengetopt by Lorenzo Bettini */ | 
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/* File autogenerated by gengetopt version 2.14  */ | 
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#ifndef DYNAMICPROPSCMD_H | 
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#define DYNAMICPROPSCMD_H | 
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#include "config.h" | 
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#endif | 
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#include <stdio.h> /* for FILE */ | 
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#ifdef __cplusplus | 
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extern "C" { | 
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#endif /* __cplusplus */ | 
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#ifndef CMDLINE_PARSER_PACKAGE | 
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/** @brief the program name (used for printing errors) */ | 
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#define CMDLINE_PARSER_PACKAGE "DynamicProps" | 
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#endif | 
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#ifndef CMDLINE_PARSER_PACKAGE_NAME | 
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/** @brief the complete program name (used for help and version) */ | 
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#define CMDLINE_PARSER_PACKAGE_NAME "DynamicProps" | 
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#endif | 
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#ifndef CMDLINE_PARSER_VERSION | 
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/** @brief the program version */ | 
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#define CMDLINE_PARSER_VERSION "1.00" | 
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#endif | 
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/** @brief Where the command line options are stored */ | 
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struct gengetopt_args_info | 
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{ | 
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  char * input_arg;     /* input dump file.  */ | 
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  char * input_orig;    /* input dump file original value given at command line.  */ | 
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  char * output_arg;    /* output file name.  */ | 
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  char * output_orig;   /* output file name original value given at command line.  */ | 
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  char * sele1_arg;     /* select first stuntdouble set.  */ | 
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  char * sele1_orig;    /* select first stuntdouble set original value given at command line.  */ | 
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  char * sele2_arg;     /* select second stuntdouble set (if sele2 is not set, use script from sele1).  */ | 
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  char * sele2_orig;    /* select second stuntdouble set (if sele2 is not set, use script from sele1) original value given at command line.  */ | 
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  int order_arg;        /* Lengendre Polynomial Order.  */ | 
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  char * order_orig;    /* Lengendre Polynomial Order original value given at command line.  */ | 
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  const char *help_help; /**< @brief Print help and exit help description.  */ | 
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  const char *version_help; /**< @brief Print version and exit help description.  */ | 
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  char * input_arg;     /**< @brief input dump file.  */ | 
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  char * input_orig;    /**< @brief input dump file original value given at command line.  */ | 
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  const char *input_help; /**< @brief input dump file help description.  */ | 
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  char * output_arg;    /**< @brief output file name.  */ | 
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  char * output_orig;   /**< @brief output file name original value given at command line.  */ | 
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  const char *output_help; /**< @brief output file name help description.  */ | 
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  char * sele1_arg;     /**< @brief select first stuntdouble set.  */ | 
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  char * sele1_orig;    /**< @brief select first stuntdouble set original value given at command line.  */ | 
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  const char *sele1_help; /**< @brief select first stuntdouble set help description.  */ | 
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  char * sele2_arg;     /**< @brief select second stuntdouble set (if sele2 is not set, use script from sele1).  */ | 
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  char * sele2_orig;    /**< @brief select second stuntdouble set (if sele2 is not set, use script from sele1) original value given at command line.  */ | 
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  const char *sele2_help; /**< @brief select second stuntdouble set (if sele2 is not set, use script from sele1) help description.  */ | 
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  int order_arg;        /**< @brief Lengendre Polynomial Order.  */ | 
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  char * order_orig;    /**< @brief Lengendre Polynomial Order original value given at command line.  */ | 
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  const char *order_help; /**< @brief Lengendre Polynomial Order help description.  */ | 
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  int nzbins_arg;       /**< @brief Number of Z bins (default='100').  */ | 
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  char * nzbins_orig;   /**< @brief Number of Z bins original value given at command line.  */ | 
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  const char *nzbins_help; /**< @brief Number of Z bins help description.  */ | 
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  char * memory_arg;    /**< @brief Available memory (defaults to 2G) (default='2G').  */ | 
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  char * memory_orig;   /**< @brief Available memory (defaults to 2G) original value given at command line.  */ | 
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  const char *memory_help; /**< @brief Available memory (defaults to 2G) help description.  */ | 
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  const char *selecorr_help; /**< @brief selection correlation function help description.  */ | 
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  const char *rcorr_help; /**< @brief rmsd help description.  */ | 
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  const char *vcorr_help; /**< @brief velocity correlation function help description.  */ | 
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  const char *dcorr_help; /**< @brief dipole correlation function help description.  */ | 
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  const char *lcorr_help; /**< @brief Lengendre correlation function help description.  */ | 
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  const char *lcorrZ_help; /**< @brief Lengendre correlation function binned by Z help description.  */ | 
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  const char *cohZ_help; /**< @brief Lengendre correlation function for OH bond vectors binned by Z help description.  */ | 
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  const char *sdcorr_help; /**< @brief System dipole correlation function help description.  */ | 
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  const char *r_rcorr_help; /**< @brief Radial rmsd help description.  */ | 
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  const char *thetacorr_help; /**< @brief Angular rmsd help description.  */ | 
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  const char *drcorr_help; /**< @brief Directional rmsd for particles with unit vectors help description.  */ | 
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  const char *helfandEcorr_help; /**< @brief Helfand moment for thermal conductvity help description.  */ | 
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  const char *momentum_help; /**< @brief Helfand momentum for viscosity help description.  */ | 
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  const char *stresscorr_help; /**< @brief Stress tensor correlation function help description.  */ | 
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  const char *bondcorr_help; /**< @brief Bond extension correlation function help description.  */ | 
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  const char *freqfluccorr_help; /**< @brief Frequency Fluctuation correlation function help description.  */ | 
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  int help_given ;      /* Whether help was given.  */ | 
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  int version_given ;   /* Whether version was given.  */ | 
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  int input_given ;     /* Whether input was given.  */ | 
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  int output_given ;    /* Whether output was given.  */ | 
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  int sele1_given ;     /* Whether sele1 was given.  */ | 
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  int sele2_given ;     /* Whether sele2 was given.  */ | 
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  int order_given ;     /* Whether order was given.  */ | 
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  int rcorr_given ;     /* Whether rcorr was given.  */ | 
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  int vcorr_given ;     /* Whether vcorr was given.  */ | 
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  int dcorr_given ;     /* Whether dcorr was given.  */ | 
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  int lcorr_given ;     /* Whether lcorr was given.  */ | 
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  int r_rcorr_given ;   /* Whether r_rcorr was given.  */ | 
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  int thetacorr_given ; /* Whether thetacorr was given.  */ | 
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  int drcorr_given ;    /* Whether drcorr was given.  */ | 
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  int helfandEcorr_given ;      /* Whether helfandEcorr was given.  */ | 
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  unsigned int help_given ;     /**< @brief Whether help was given.  */ | 
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  unsigned int version_given ;  /**< @brief Whether version was given.  */ | 
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  unsigned int input_given ;    /**< @brief Whether input was given.  */ | 
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  unsigned int output_given ;   /**< @brief Whether output was given.  */ | 
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  unsigned int sele1_given ;    /**< @brief Whether sele1 was given.  */ | 
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  unsigned int sele2_given ;    /**< @brief Whether sele2 was given.  */ | 
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  unsigned int order_given ;    /**< @brief Whether order was given.  */ | 
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  unsigned int nzbins_given ;   /**< @brief Whether nzbins was given.  */ | 
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  unsigned int memory_given ;   /**< @brief Whether memory was given.  */ | 
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  unsigned int selecorr_given ; /**< @brief Whether selecorr was given.  */ | 
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  unsigned int rcorr_given ;    /**< @brief Whether rcorr was given.  */ | 
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  unsigned int vcorr_given ;    /**< @brief Whether vcorr was given.  */ | 
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  unsigned int dcorr_given ;    /**< @brief Whether dcorr was given.  */ | 
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  unsigned int lcorr_given ;    /**< @brief Whether lcorr was given.  */ | 
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  unsigned int lcorrZ_given ;   /**< @brief Whether lcorrZ was given.  */ | 
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  unsigned int cohZ_given ;     /**< @brief Whether cohZ was given.  */ | 
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  unsigned int sdcorr_given ;   /**< @brief Whether sdcorr was given.  */ | 
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  unsigned int r_rcorr_given ;  /**< @brief Whether r_rcorr was given.  */ | 
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  unsigned int thetacorr_given ;        /**< @brief Whether thetacorr was given.  */ | 
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  unsigned int drcorr_given ;   /**< @brief Whether drcorr was given.  */ | 
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  unsigned int helfandEcorr_given ;     /**< @brief Whether helfandEcorr was given.  */ | 
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  unsigned int momentum_given ; /**< @brief Whether momentum was given.  */ | 
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  unsigned int stresscorr_given ;       /**< @brief Whether stresscorr was given.  */ | 
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  unsigned int bondcorr_given ; /**< @brief Whether bondcorr was given.  */ | 
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  unsigned int freqfluccorr_given ;     /**< @brief Whether freqfluccorr was given.  */ | 
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  int dynamicProps_group_counter; /* counter for group dynamicProps */ | 
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  char **inputs ; /**< @brief unamed options (options without names) */ | 
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  unsigned inputs_num ; /**< @brief unamed options number */ | 
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  int dynamicProps_group_counter; /**< @brief Counter for group dynamicProps */ | 
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} ; | 
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int cmdline_parser (int argc, char * const *argv, struct gengetopt_args_info *args_info); | 
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int cmdline_parser2 (int argc, char * const *argv, struct gengetopt_args_info *args_info, int override, int initialize, int check_required); | 
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int cmdline_parser_file_save(const char *filename, struct gengetopt_args_info *args_info); | 
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/** @brief The additional parameters to pass to parser functions */ | 
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struct cmdline_parser_params | 
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{ | 
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  int override; /**< @brief whether to override possibly already present options (default 0) */ | 
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  int initialize; /**< @brief whether to initialize the option structure gengetopt_args_info (default 1) */ | 
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  int check_required; /**< @brief whether to check that all required options were provided (default 1) */ | 
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  int check_ambiguity; /**< @brief whether to check for options already specified in the option structure gengetopt_args_info (default 0) */ | 
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  int print_errors; /**< @brief whether getopt_long should print an error message for a bad option (default 1) */ | 
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} ; | 
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/** @brief the purpose string of the program */ | 
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extern const char *gengetopt_args_info_purpose; | 
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/** @brief the usage string of the program */ | 
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extern const char *gengetopt_args_info_usage; | 
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/** @brief all the lines making the help output */ | 
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extern const char *gengetopt_args_info_help[]; | 
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/** | 
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 * The command line parser | 
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 * @param argc the number of command line options | 
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 * @param argv the command line options | 
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 * @param args_info the structure where option information will be stored | 
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 * @return 0 if everything went fine, NON 0 if an error took place | 
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 */ | 
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int cmdline_parser (int argc, char **argv, | 
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  struct gengetopt_args_info *args_info); | 
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/** | 
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 * The command line parser (version with additional parameters - deprecated) | 
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 * @param argc the number of command line options | 
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 * @param argv the command line options | 
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 * @param args_info the structure where option information will be stored | 
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 * @param override whether to override possibly already present options | 
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 * @param initialize whether to initialize the option structure my_args_info | 
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 * @param check_required whether to check that all required options were provided | 
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 * @return 0 if everything went fine, NON 0 if an error took place | 
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 * @deprecated use cmdline_parser_ext() instead | 
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 */ | 
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int cmdline_parser2 (int argc, char **argv, | 
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  struct gengetopt_args_info *args_info, | 
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  int override, int initialize, int check_required); | 
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/** | 
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 * The command line parser (version with additional parameters) | 
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 * @param argc the number of command line options | 
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 * @param argv the command line options | 
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 * @param args_info the structure where option information will be stored | 
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 * @param params additional parameters for the parser | 
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 * @return 0 if everything went fine, NON 0 if an error took place | 
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 */ | 
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int cmdline_parser_ext (int argc, char **argv, | 
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  struct gengetopt_args_info *args_info, | 
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  struct cmdline_parser_params *params); | 
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/** | 
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 * Save the contents of the option struct into an already open FILE stream. | 
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 * @param outfile the stream where to dump options | 
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 * @param args_info the option struct to dump | 
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 * @return 0 if everything went fine, NON 0 if an error took place | 
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 */ | 
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int cmdline_parser_dump(FILE *outfile, | 
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  struct gengetopt_args_info *args_info); | 
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/** | 
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 * Save the contents of the option struct into a (text) file. | 
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 * This file can be read by the config file parser (if generated by gengetopt) | 
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 * @param filename the file where to save | 
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 * @param args_info the option struct to save | 
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 * @return 0 if everything went fine, NON 0 if an error took place | 
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 */ | 
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int cmdline_parser_file_save(const char *filename, | 
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  struct gengetopt_args_info *args_info); | 
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/** | 
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 * Print the help | 
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 */ | 
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void cmdline_parser_print_help(void); | 
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/** | 
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 * Print the version | 
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 */ | 
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void cmdline_parser_print_version(void); | 
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/** | 
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 * Initializes all the fields a cmdline_parser_params structure  | 
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 * to their default values | 
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 * @param params the structure to initialize | 
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 */ | 
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void cmdline_parser_params_init(struct cmdline_parser_params *params); | 
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/** | 
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 * Allocates dynamically a cmdline_parser_params structure and initializes | 
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 * all its fields to their default values | 
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 * @return the created and initialized cmdline_parser_params structure | 
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 */ | 
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struct cmdline_parser_params *cmdline_parser_params_create(void); | 
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/** | 
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 * Initializes the passed gengetopt_args_info structure's fields | 
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 * (also set default values for options that have a default) | 
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 * @param args_info the structure to initialize | 
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 */ | 
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void cmdline_parser_init (struct gengetopt_args_info *args_info); | 
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/** | 
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 * Deallocates the string fields of the gengetopt_args_info structure | 
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 * (but does not deallocate the structure itself) | 
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 * @param args_info the structure to deallocate | 
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 */ | 
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void cmdline_parser_free (struct gengetopt_args_info *args_info); | 
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int cmdline_parser_required (struct gengetopt_args_info *args_info, const char *prog_name); | 
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/** | 
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 * Checks that all the required options were specified | 
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 * @param args_info the structure to check | 
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 * @param prog_name the name of the program that will be used to print | 
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 *   possible errors | 
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 * @return | 
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 */ | 
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int cmdline_parser_required (struct gengetopt_args_info *args_info, | 
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  const char *prog_name); | 
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#ifdef __cplusplus |