--- trunk/src/applications/hydrodynamics/Hydro.cpp 2006/05/24 18:31:12 972 +++ trunk/src/applications/hydrodynamics/Hydro.cpp 2006/08/30 21:13:57 1027 @@ -89,19 +89,16 @@ int main(int argc, char* argv[]){ exit(1); } - mdFileName = dumpFileName; - mdFileName = mdFileName.substr(0, mdFileName.rfind(".")) + ".md"; - if (args_info.output_given){ prefix = args_info.output_arg; } else { - prefix = getPrefix(mdFileName); + prefix = getPrefix(dumpFileName); } std::string outputFilename = prefix + ".diff"; //parse md file and set up the system SimCreator creator; - SimInfo* info = creator.createSim(mdFileName, true); + SimInfo* info = creator.createSim(dumpFileName, true); SimInfo::MoleculeIterator mi; Molecule* mol; @@ -113,8 +110,8 @@ int main(int argc, char* argv[]){ identMat(2,2) = 1.0; Globals* simParams = info->getSimParams(); - double temperature; - double viscosity; + RealType temperature; + RealType viscosity; if (simParams->haveViscosity()) { viscosity = simParams->getViscosity();