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root/OpenMD/trunk/src/applications/hydrodynamics/HydroCmd.cpp
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Comparing trunk/src/applications/hydrodynamics/HydroCmd.c (file contents):
Revision 891 by tim, Wed Feb 22 20:35:16 2006 UTC vs.
Revision 1177 by xsun, Tue Aug 14 17:40:33 2007 UTC

# Line 1 | Line 1
1   /*
2 <  File autogenerated by gengetopt version 2.11
2 >  File autogenerated by gengetopt version 2.16
3    generated with the following command:
4 <  /home/maul/gezelter/tim/program/gengetopt-2.11/src/gengetopt -F HydroCmd
4 >  gengetopt -F HydroCmd
5  
6    The developers of gengetopt consider the fixed text that goes in all
7    gengetopt output files to be in the public domain:
8    we make no copyright claims on it.
9   */
10  
11 –
12 – #include <stdio.h>
13 – #include <stdlib.h>
14 – #include <string.h>
15 –
11   /* If we use autoconf.  */
12   #ifdef HAVE_CONFIG_H
13   #include "config.h"
14   #endif
15  
16 + #include <stdio.h>
17 + #include <stdlib.h>
18 + #include <string.h>
19 +
20   #include "getopt.h"
21  
22   #include "HydroCmd.h"
23  
24 + static
25 + void clear_given (struct gengetopt_args_info *args_info);
26 + static
27 + void clear_args (struct gengetopt_args_info *args_info);
28 +
29 + static int
30 + cmdline_parser_internal (int argc, char * const *argv, struct gengetopt_args_info *args_info, int override, int initialize, int check_required, const char *additional_error);
31 +
32 + static int
33 + cmdline_parser_required2 (struct gengetopt_args_info *args_info, const char *prog_name, const char *additional_error);
34 +
35 + static char *
36 + gengetopt_strdup (const char *s);
37 +
38 + static
39 + void clear_given (struct gengetopt_args_info *args_info)
40 + {
41 +  args_info->help_given = 0 ;
42 +  args_info->version_given = 0 ;
43 +  args_info->input_given = 0 ;
44 +  args_info->output_given = 0 ;
45 +  args_info->model_given = 0 ;
46 +  args_info->beads_given = 0 ;
47 + }
48 +
49 + static
50 + void clear_args (struct gengetopt_args_info *args_info)
51 + {
52 +  args_info->input_arg = NULL;
53 +  args_info->input_orig = NULL;
54 +  args_info->output_arg = gengetopt_strdup ("hydro");
55 +  args_info->output_orig = NULL;
56 +  args_info->model_arg = NULL;
57 +  args_info->model_orig = NULL;
58 +  args_info->beads_flag = 0;
59 +  
60 + }
61 +
62   void
63   cmdline_parser_print_version (void)
64   {
# Line 32 | Line 69 | cmdline_parser_print_help (void)
69   cmdline_parser_print_help (void)
70   {
71    cmdline_parser_print_version ();
72 <  printf("\n"
73 <  "Usage: %s [OPTIONS]...\n", CMDLINE_PARSER_PACKAGE);
74 <  printf("\n");
75 <  printf("  -h, --help              Print help and exit\n");
76 <  printf("  -V, --version           Print version and exit\n");
77 <  printf("  -i, --input=filename    input dump file\n");
78 <  printf("  -o, --output=STRING     output file prefix  (default=`hydro')\n");
79 <  printf("      --viscosity=DOUBLE  viscosity of solvent\n");
80 <  printf("      --sigma=DOUBLE      diameter of beads(use with rough shell model)\n");
44 <  printf("      --model=STRING      hydrodynamics model (support RoughShell and \n                            BeadModel)\n");
72 >  printf("\n%s\n", "\n+----------------------------------------------------------------------+ \n|    ____  ____  ____  _____ ______  The OpenSource, Object-oriented   | \n|   / __ \\/ __ \\/ __ \\/ ___// ____/  Parallel Simulation Engine.       | \n|  / / / / / / / /_/ /\\__ \\/ __/                                       | \n| / /_/ / /_/ / ____/___/ / /___     Copyright 2004-2006 by the        | \n| \\____/\\____/_/    /____/_____/     University of Notre Dame.         | \n|                                                                      | \n|                                    http://www.oopse.org              |\n|                                                                      | \n| OOPSE is an OpenScience project.  All source code is available for   |\n| any use subject to only one condition:                               | \n|                                                                      |\n| Any published work resulting from the use of this code must cite the | \n| following paper:       M. A. Meineke, C. F. Vardeman II, T. Lin,     | \n|                        C. J. Fennell, and J. D. Gezelter,            | \n|                        J. Comput. Chem. 26, pp. 252-271 (2005).      | \n+----------------------------------------------------------------------+");
73 >  printf("\nUsage: Hydro [OPTIONS]...\n\n");
74 >  printf("%s\n","  -h, --help            Print help and exit");
75 >  printf("%s\n","  -V, --version         Print version and exit");
76 >  printf("%s\n","  -i, --input=filename  input MetaData (md) file");
77 >  printf("%s\n","  -o, --output=STRING   output file prefix  (default=`hydro')");
78 >  printf("%s\n","      --model=STRING    hydrodynamics model (supports RoughShell and BeadModel)");
79 >  printf("%s\n","  -b, --beads           generate the beads only, hydrodynamics will be \n                          performed  (default=off)");
80 >  
81   }
82  
83 + void
84 + cmdline_parser_init (struct gengetopt_args_info *args_info)
85 + {
86 +  clear_given (args_info);
87 +  clear_args (args_info);
88 + }
89  
90 < static char *gengetopt_strdup (const char *s);
90 > static void
91 > cmdline_parser_release (struct gengetopt_args_info *args_info)
92 > {
93 >  
94 >  if (args_info->input_arg)
95 >    {
96 >      free (args_info->input_arg); /* free previous argument */
97 >      args_info->input_arg = 0;
98 >    }
99 >  if (args_info->input_orig)
100 >    {
101 >      free (args_info->input_orig); /* free previous argument */
102 >      args_info->input_orig = 0;
103 >    }
104 >  if (args_info->output_arg)
105 >    {
106 >      free (args_info->output_arg); /* free previous argument */
107 >      args_info->output_arg = 0;
108 >    }
109 >  if (args_info->output_orig)
110 >    {
111 >      free (args_info->output_orig); /* free previous argument */
112 >      args_info->output_orig = 0;
113 >    }
114 >  if (args_info->model_arg)
115 >    {
116 >      free (args_info->model_arg); /* free previous argument */
117 >      args_info->model_arg = 0;
118 >    }
119 >  if (args_info->model_orig)
120 >    {
121 >      free (args_info->model_orig); /* free previous argument */
122 >      args_info->model_orig = 0;
123 >    }
124 >  
125 >  clear_given (args_info);
126 > }
127  
128 + int
129 + cmdline_parser_file_save(const char *filename, struct gengetopt_args_info *args_info)
130 + {
131 +  FILE *outfile;
132 +  int i = 0;
133 +
134 +  outfile = fopen(filename, "w");
135 +
136 +  if (!outfile)
137 +    {
138 +      fprintf (stderr, "%s: cannot open file for writing: %s\n", CMDLINE_PARSER_PACKAGE, filename);
139 +      return EXIT_FAILURE;
140 +    }
141 +
142 +  if (args_info->help_given) {
143 +    fprintf(outfile, "%s\n", "help");
144 +  }
145 +  if (args_info->version_given) {
146 +    fprintf(outfile, "%s\n", "version");
147 +  }
148 +  if (args_info->input_given) {
149 +    if (args_info->input_orig) {
150 +      fprintf(outfile, "%s=\"%s\"\n", "input", args_info->input_orig);
151 +    } else {
152 +      fprintf(outfile, "%s\n", "input");
153 +    }
154 +  }
155 +  if (args_info->output_given) {
156 +    if (args_info->output_orig) {
157 +      fprintf(outfile, "%s=\"%s\"\n", "output", args_info->output_orig);
158 +    } else {
159 +      fprintf(outfile, "%s\n", "output");
160 +    }
161 +  }
162 +  if (args_info->model_given) {
163 +    if (args_info->model_orig) {
164 +      fprintf(outfile, "%s=\"%s\"\n", "model", args_info->model_orig);
165 +    } else {
166 +      fprintf(outfile, "%s\n", "model");
167 +    }
168 +  }
169 +  if (args_info->beads_given) {
170 +    fprintf(outfile, "%s\n", "beads");
171 +  }
172 +  
173 +  fclose (outfile);
174 +
175 +  i = EXIT_SUCCESS;
176 +  return i;
177 + }
178 +
179 + void
180 + cmdline_parser_free (struct gengetopt_args_info *args_info)
181 + {
182 +  cmdline_parser_release (args_info);
183 + }
184 +
185 +
186   /* gengetopt_strdup() */
187   /* strdup.c replacement of strdup, which is not standard */
188   char *
189   gengetopt_strdup (const char *s)
190   {
191 <  char *result = (char*)malloc(strlen(s) + 1);
191 >  char *result = NULL;
192 >  if (!s)
193 >    return result;
194 >
195 >  result = (char*)malloc(strlen(s) + 1);
196    if (result == (char*)0)
197      return (char*)0;
198    strcpy(result, s);
# Line 62 | Line 202 | cmdline_parser (int argc, char * const *argv, struct g
202   int
203   cmdline_parser (int argc, char * const *argv, struct gengetopt_args_info *args_info)
204   {
205 <  int c;        /* Character of the parsed option.  */
206 <  int missing_required_options = 0;
205 >  return cmdline_parser2 (argc, argv, args_info, 0, 1, 1);
206 > }
207  
208 <  args_info->help_given = 0 ;
209 <  args_info->version_given = 0 ;
210 <  args_info->input_given = 0 ;
211 <  args_info->output_given = 0 ;
212 <  args_info->viscosity_given = 0 ;
213 <  args_info->sigma_given = 0 ;
214 <  args_info->model_given = 0 ;
215 < #define clear_args() { \
216 <  args_info->input_arg = NULL; \
217 <  args_info->output_arg = gengetopt_strdup("hydro") ;\
218 <  args_info->model_arg = NULL; \
208 > int
209 > cmdline_parser2 (int argc, char * const *argv, struct gengetopt_args_info *args_info, int override, int initialize, int check_required)
210 > {
211 >  int result;
212 >
213 >  result = cmdline_parser_internal (argc, argv, args_info, override, initialize, check_required, NULL);
214 >
215 >  if (result == EXIT_FAILURE)
216 >    {
217 >      cmdline_parser_free (args_info);
218 >      exit (EXIT_FAILURE);
219 >    }
220 >  
221 >  return result;
222   }
223  
224 <  clear_args();
224 > int
225 > cmdline_parser_required (struct gengetopt_args_info *args_info, const char *prog_name)
226 > {
227 >  int result = EXIT_SUCCESS;
228 >
229 >  if (cmdline_parser_required2(args_info, prog_name, NULL) > 0)
230 >    result = EXIT_FAILURE;
231  
232 +  if (result == EXIT_FAILURE)
233 +    {
234 +      cmdline_parser_free (args_info);
235 +      exit (EXIT_FAILURE);
236 +    }
237 +  
238 +  return result;
239 + }
240 +
241 + int
242 + cmdline_parser_required2 (struct gengetopt_args_info *args_info, const char *prog_name, const char *additional_error)
243 + {
244 +  int error = 0;
245 +
246 +  if (! args_info->input_given)
247 +    {
248 +      fprintf (stderr, "%s: '--input' ('-i') option required%s\n", prog_name, (additional_error ? additional_error : ""));
249 +      error = 1;
250 +    }
251 +  if (! args_info->model_given)
252 +    {
253 +      fprintf (stderr, "%s: '--model' option required%s\n", prog_name, (additional_error ? additional_error : ""));
254 +      error = 1;
255 +    }
256 +
257 +  return error;
258 + }
259 +
260 + int
261 + cmdline_parser_internal (int argc, char * const *argv, struct gengetopt_args_info *args_info, int override, int initialize, int check_required, const char *additional_error)
262 + {
263 +  int c;        /* Character of the parsed option.  */
264 +
265 +  int error = 0;
266 +  struct gengetopt_args_info local_args_info;
267 +
268 +  if (initialize)
269 +    cmdline_parser_init (args_info);
270 +
271 +  cmdline_parser_init (&local_args_info);
272 +
273    optarg = 0;
274 <  optind = 1;
274 >  optind = 0;
275    opterr = 1;
276    optopt = '?';
277  
# Line 95 | Line 285 | cmdline_parser (int argc, char * const *argv, struct g
285          { "version",    0, NULL, 'V' },
286          { "input",      1, NULL, 'i' },
287          { "output",     1, NULL, 'o' },
98 –        { "viscosity",  1, NULL, 0 },
99 –        { "sigma",      1, NULL, 0 },
288          { "model",      1, NULL, 0 },
289 +        { "beads",      0, NULL, 'b' },
290          { NULL, 0, NULL, 0 }
291        };
292  
293        stop_char = 0;
294 <      c = getopt_long (argc, argv, "hVi:o:", long_options, &option_index);
294 >      c = getopt_long (argc, argv, "hVi:o:b", long_options, &option_index);
295  
296        if (c == -1) break;       /* Exit from `while (1)' loop.  */
297  
298        switch (c)
299          {
300          case 'h':       /* Print help and exit.  */
112 –          clear_args ();
301            cmdline_parser_print_help ();
302 +          cmdline_parser_free (&local_args_info);
303            exit (EXIT_SUCCESS);
304  
305          case 'V':       /* Print version and exit.  */
117 –          clear_args ();
306            cmdline_parser_print_version ();
307 +          cmdline_parser_free (&local_args_info);
308            exit (EXIT_SUCCESS);
309  
310 <        case 'i':       /* input dump file.  */
311 <          if (args_info->input_given)
310 >        case 'i':       /* input MetaData (md) file.  */
311 >          if (local_args_info.input_given)
312              {
313 <              fprintf (stderr, "%s: `--input' (`-i') option given more than once\n", CMDLINE_PARSER_PACKAGE);
314 <              clear_args ();
126 <              exit (EXIT_FAILURE);
313 >              fprintf (stderr, "%s: `--input' (`-i') option given more than once%s\n", argv[0], (additional_error ? additional_error : ""));
314 >              goto failure;
315              }
316 +          if (args_info->input_given && ! override)
317 +            continue;
318 +          local_args_info.input_given = 1;
319            args_info->input_given = 1;
320 +          if (args_info->input_arg)
321 +            free (args_info->input_arg); /* free previous string */
322            args_info->input_arg = gengetopt_strdup (optarg);
323 +          if (args_info->input_orig)
324 +            free (args_info->input_orig); /* free previous string */
325 +          args_info->input_orig = gengetopt_strdup (optarg);
326            break;
327  
328          case 'o':       /* output file prefix.  */
329 <          if (args_info->output_given)
329 >          if (local_args_info.output_given)
330              {
331 <              fprintf (stderr, "%s: `--output' (`-o') option given more than once\n", CMDLINE_PARSER_PACKAGE);
332 <              clear_args ();
137 <              exit (EXIT_FAILURE);
331 >              fprintf (stderr, "%s: `--output' (`-o') option given more than once%s\n", argv[0], (additional_error ? additional_error : ""));
332 >              goto failure;
333              }
334 +          if (args_info->output_given && ! override)
335 +            continue;
336 +          local_args_info.output_given = 1;
337            args_info->output_given = 1;
338            if (args_info->output_arg)
339 <            free (args_info->output_arg); /* free default string */
339 >            free (args_info->output_arg); /* free previous string */
340            args_info->output_arg = gengetopt_strdup (optarg);
341 +          if (args_info->output_orig)
342 +            free (args_info->output_orig); /* free previous string */
343 +          args_info->output_orig = gengetopt_strdup (optarg);
344            break;
345  
346 +        case 'b':       /* generate the beads only, hydrodynamics will be performed.  */
347 +          if (local_args_info.beads_given)
348 +            {
349 +              fprintf (stderr, "%s: `--beads' (`-b') option given more than once%s\n", argv[0], (additional_error ? additional_error : ""));
350 +              goto failure;
351 +            }
352 +          if (args_info->beads_given && ! override)
353 +            continue;
354 +          local_args_info.beads_given = 1;
355 +          args_info->beads_given = 1;
356 +          args_info->beads_flag = !(args_info->beads_flag);
357 +          break;
358  
359 +
360          case 0: /* Long option with no short option */
361 <          /* viscosity of solvent.  */
362 <          if (strcmp (long_options[option_index].name, "viscosity") == 0)
361 >          /* hydrodynamics model (supports RoughShell and BeadModel).  */
362 >          if (strcmp (long_options[option_index].name, "model") == 0)
363            {
364 <            if (args_info->viscosity_given)
364 >            if (local_args_info.model_given)
365                {
366 <                fprintf (stderr, "%s: `--viscosity' option given more than once\n", CMDLINE_PARSER_PACKAGE);
367 <                clear_args ();
154 <                exit (EXIT_FAILURE);
366 >                fprintf (stderr, "%s: `--model' option given more than once%s\n", argv[0], (additional_error ? additional_error : ""));
367 >                goto failure;
368                }
369 <            args_info->viscosity_given = 1;
370 <            args_info->viscosity_arg = strtod (optarg, NULL);
371 <            break;
159 <          }
160 <          
161 <          /* diameter of beads(use with rough shell model).  */
162 <          else if (strcmp (long_options[option_index].name, "sigma") == 0)
163 <          {
164 <            if (args_info->sigma_given)
165 <              {
166 <                fprintf (stderr, "%s: `--sigma' option given more than once\n", CMDLINE_PARSER_PACKAGE);
167 <                clear_args ();
168 <                exit (EXIT_FAILURE);
169 <              }
170 <            args_info->sigma_given = 1;
171 <            args_info->sigma_arg = strtod (optarg, NULL);
172 <            break;
173 <          }
174 <          
175 <          /* hydrodynamics model (support RoughShell and BeadModel).  */
176 <          else if (strcmp (long_options[option_index].name, "model") == 0)
177 <          {
178 <            if (args_info->model_given)
179 <              {
180 <                fprintf (stderr, "%s: `--model' option given more than once\n", CMDLINE_PARSER_PACKAGE);
181 <                clear_args ();
182 <                exit (EXIT_FAILURE);
183 <              }
369 >            if (args_info->model_given && ! override)
370 >              continue;
371 >            local_args_info.model_given = 1;
372              args_info->model_given = 1;
373 +            if (args_info->model_arg)
374 +              free (args_info->model_arg); /* free previous string */
375              args_info->model_arg = gengetopt_strdup (optarg);
376 <            break;
376 >            if (args_info->model_orig)
377 >              free (args_info->model_orig); /* free previous string */
378 >            args_info->model_orig = gengetopt_strdup (optarg);
379            }
380            
381 <
381 >          break;
382          case '?':       /* Invalid option.  */
383            /* `getopt_long' already printed an error message.  */
384 <          exit (EXIT_FAILURE);
384 >          goto failure;
385  
386          default:        /* bug: option not considered.  */
387 <          fprintf (stderr, "%s: option unknown: %c\n", CMDLINE_PARSER_PACKAGE, c);
387 >          fprintf (stderr, "%s: option unknown: %c%s\n", CMDLINE_PARSER_PACKAGE, c, (additional_error ? additional_error : ""));
388            abort ();
389          } /* switch */
390      } /* while */
391  
392  
393 <  if (! args_info->input_given)
393 >
394 >  if (check_required)
395      {
396 <      fprintf (stderr, "%s: '--input' ('-i') option required\n", CMDLINE_PARSER_PACKAGE);
204 <      missing_required_options = 1;
396 >      error += cmdline_parser_required2 (args_info, argv[0], additional_error);
397      }
206 –  if (! args_info->viscosity_given)
207 –    {
208 –      fprintf (stderr, "%s: '--viscosity' option required\n", CMDLINE_PARSER_PACKAGE);
209 –      missing_required_options = 1;
210 –    }
211 –  if (! args_info->model_given)
212 –    {
213 –      fprintf (stderr, "%s: '--model' option required\n", CMDLINE_PARSER_PACKAGE);
214 –      missing_required_options = 1;
215 –    }
216 –  if ( missing_required_options )
217 –    exit (EXIT_FAILURE);
398  
399 +  cmdline_parser_release (&local_args_info);
400 +
401 +  if ( error )
402 +    return (EXIT_FAILURE);
403 +
404    return 0;
405 +
406 + failure:
407 +  
408 +  cmdline_parser_release (&local_args_info);
409 +  return (EXIT_FAILURE);
410   }

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