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root/OpenMD/trunk/src/applications/nanoparticleBuilder/shapedLatticePentRod.cpp
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Comparing trunk/src/applications/nanoparticleBuilder/shapedLatticePentRod.cpp (file contents):
Revision 1790 by gezelter, Thu Aug 30 17:18:22 2012 UTC vs.
Revision 1879 by gezelter, Sun Jun 16 15:15:42 2013 UTC

# Line 35 | Line 35
35   *                                                                      
36   * [1]  Meineke, et al., J. Comp. Chem. 26, 252-271 (2005).            
37   * [2]  Fennell & Gezelter, J. Chem. Phys. 124, 234104 (2006).          
38 < * [3]  Sun, Lin & Gezelter, J. Chem. Phys. 128, 24107 (2008).          
38 > * [3]  Sun, Lin & Gezelter, J. Chem. Phys. 128, 234107 (2008).          
39   * [4]  Kuang & Gezelter,  J. Chem. Phys. 133, 164101 (2010).
40   * [4]  Vardeman, Stocker & Gezelter, J. Chem. Theory Comput. 7, 834 (2011). *
41   *  Created by Kelsey M. Stocker on 2/9/12.
# Line 81 | Line 81 | namespace OpenMD {
81    bool shapedLatticePentRod::isInterior(Vector3d point){
82  
83      RealType x, y, z, new_x, new_y, left_newx, right_newx;
84 <    int z_int;
84 >    // int z_int;
85  
86      bool isIT=false;
87  
# Line 89 | Line 89 | namespace OpenMD {
89      y = point[1];
90      z = point[2];
91  
92 <    z_int = int(z/2.04);
92 >    // z_int = int(z/2.04);
93  
94      //Rotate by 45 degrees around z-axis so length of rod lies along y axis
95      new_x = (sqrt(2.0)/2)*(x - y);

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