| 1 |  | /* | 
| 2 | < | * Copyright (c) 2005 The University of Notre Dame. All Rights Reserved. | 
| 2 | > | * Copyright (c) 2006 The University of Notre Dame. All Rights Reserved. | 
| 3 |  | * | 
| 4 |  | * The University of Notre Dame grants you ("Licensee") a | 
| 5 |  | * non-exclusive, royalty free, license to use, modify and | 
| 44 |  | #endif | 
| 45 |  |  | 
| 46 |  | #include "utils/simError.h" | 
| 47 | + | #include "utils/CaseConversion.hpp" | 
| 48 |  | #include "brains/Register.hpp" | 
| 49 |  | #include "brains/SimCreator.hpp" | 
| 50 |  | #include "brains/SimInfo.hpp" | 
| 53 |  | #include "integrators/Integrator.hpp" | 
| 54 |  | #include "minimizers/MinimizerFactory.hpp" | 
| 55 |  | #include "minimizers/Minimizer.hpp" | 
| 56 | + | #include "restraints/ThermoIntegrationForceManager.hpp" | 
| 57 | + |  | 
| 58 |  | using namespace oopse; | 
| 59 |  |  | 
| 60 |  | int main(int argc,char* argv[]){ | 
| 76 |  | "  |    ____  ____  ____  _____ ______  The OpenSource, Object-oriented   |\n" << | 
| 77 |  | "  |   / __ \\/ __ \\/ __ \\/ ___// ____/  Parallel Simulation Engine.       |\n" << | 
| 78 |  | "  |  / / / / / / / /_/ /\\__ \\/ __/                                       |\n" << | 
| 79 | < | "  | / /_/ / /_/ / ____/___/ / /___     Copyright 2004-2005 by the        |\n" << | 
| 79 | > | "  | / /_/ / /_/ / ____/___/ / /___     Copyright 2004-2006 by the        |\n" << | 
| 80 |  | "  | \\____/\\____/_/    /____/_____/     University of Notre Dame.         |\n" << | 
| 81 |  | "  |                                                                      |\n" << | 
| 82 |  | "  |                     version " << | 
| 125 |  |  | 
| 126 |  | if (simParams->haveMinimizer()) { | 
| 127 |  | //create minimizer | 
| 128 | < | Minimizer* myMinimizer = MinimizerFactory::getInstance()->createMinimizer(simParams->getMinimizer(), info); | 
| 128 | > | Minimizer* myMinimizer = MinimizerFactory::getInstance()->createMinimizer(toUpperCopy(simParams->getMinimizer()), info); | 
| 129 |  |  | 
| 130 |  | if (myMinimizer == NULL) { | 
| 131 |  | sprintf(painCave.errMsg, "Minimizer Factory can not create %s Minimizer\n", | 
| 139 |  | } else if (simParams->haveEnsemble()) { | 
| 140 |  | //create Integrator | 
| 141 |  |  | 
| 142 | < | Integrator* myIntegrator = IntegratorFactory::getInstance()->createIntegrator(simParams->getEnsemble(), info); | 
| 143 | < |  | 
| 142 | > | Integrator* myIntegrator = IntegratorFactory::getInstance()->createIntegrator(toUpperCopy(simParams->getEnsemble()), info); | 
| 143 | > |  | 
| 144 |  | if (myIntegrator == NULL) { | 
| 145 |  | sprintf(painCave.errMsg, "Integrator Factory can not create %s Integrator\n", | 
| 146 |  | simParams->getEnsemble().c_str()); | 
| 149 |  | } | 
| 150 |  |  | 
| 151 |  | //Thermodynamic Integration Method | 
| 152 | < | //ForceManager* fman = new ThermodynamicForceManager(info); | 
| 153 | < | //myIntegrator->setForceManager(fman); | 
| 152 | > | //set the force manager for thermodynamic integration if specified | 
| 153 | > | if (simParams->getUseSolidThermInt() || simParams->getUseLiquidThermInt()){ | 
| 154 | > | ForceManager* fman = new ThermoIntegrationForceManager(info); | 
| 155 | > | myIntegrator->setForceManager(fman); | 
| 156 | > | } | 
| 157 |  |  | 
| 152 | – |  | 
| 158 |  | //Zconstraint-Method | 
| 159 | < | if (simParams->haveNZconstraints()) { | 
| 160 | < | info->setNZconstraint(simParams->getNZconstraints()); | 
| 159 | > | if (simParams->getNZconsStamps() > 0) { | 
| 160 | > | info->setNZconstraint(simParams->getNZconsStamps()); | 
| 161 |  | ForceManager* fman = new ZconstraintForceManager(info); | 
| 162 |  | myIntegrator->setForceManager(fman); | 
| 163 |  | } | 
| 176 |  | delete info; | 
| 177 |  |  | 
| 178 |  | #ifdef IS_MPI | 
| 179 | < | strcpy( checkPointMsg, "Oh what a lovely Tea Party!" ); | 
| 179 | > | strcpy( checkPointMsg, "Yoikes!  It worked!" ); | 
| 180 |  | MPIcheckPoint(); | 
| 181 |  |  | 
| 182 |  | MPI_Finalize(); |