| 44 |  | #include "selection/SelectionManager.hpp" | 
| 45 |  | #include "applications/staticProps/StaticAnalyser.hpp" | 
| 46 |  | #include "math/Vector3.hpp" | 
| 47 | + | #include "math/Wigner3jm_interface.h" | 
| 48 |  |  | 
| 49 |  | namespace oopse { | 
| 50 | + |  | 
| 51 | + | class BondOrderParameter : public StaticAnalyser{ | 
| 52 | + | public: | 
| 53 | + | BondOrderParameter(SimInfo* info, const std::string& filename, | 
| 54 | + | const std::string& sele, double rCut, int lNumber, int nbins); | 
| 55 |  |  | 
| 56 | < | class BondOrderParameter : public StaticAnalyser{ | 
| 57 | < | public: | 
| 52 | < | BondOrderParameter(SimInfo* info, const std::string& filename, const std::string& sele1, | 
| 53 | < | const std::string& sele2, double rCut, int lNumber ); | 
| 54 | < | virtual void process(); | 
| 56 | > | virtual ~BondOrderParameter(); | 
| 57 | > | virtual void process(); | 
| 58 |  |  | 
| 59 | < | private: | 
| 59 | > | private: | 
| 60 | > |  | 
| 61 | > | void writeOrderParameter(RealType Q_l, RealType W_l_hat); | 
| 62 | > | virtual void initalizeHistogram(); | 
| 63 | > | virtual void collectHistogram(RealType q_l, RealType w_l); | 
| 64 |  |  | 
| 65 | < | struct OrderParam{ | 
| 59 | < | RealType p2; | 
| 60 | < | Vector3d director; | 
| 61 | < | RealType angle; | 
| 62 | < | }; | 
| 63 | < | void writeP2(); | 
| 65 | > | Snapshot* currentSnapshot_; | 
| 66 |  |  | 
| 67 | < | Snapshot* currentSnapshot_; | 
| 68 | < |  | 
| 69 | < | std::string selectionScript1_; | 
| 68 | < | SelectionManager seleMan1_; | 
| 69 | < | SelectionEvaluator evaluator1_; | 
| 67 | > | std::string selectionScript_; | 
| 68 | > | SelectionManager seleMan_; | 
| 69 | > | SelectionEvaluator evaluator_; | 
| 70 |  |  | 
| 71 | < | std::vector<Vector3d> neighbors_; | 
| 72 | < | std::vector<std::pair<StuntDouble*, StuntDouble*> > sdPairs_;  /**< each pair is used to define a vector, vector = first - second */ | 
| 73 | < | std::vector<OrderParam> orderParams_; | 
| 74 | < |  | 
| 75 | < | double rCut_; | 
| 76 | < | int lNumber_; | 
| 77 | < | }; | 
| 71 | > | RealType rCut_; | 
| 72 | > | int lNumber_; | 
| 73 | > | int mSize_; | 
| 74 | > | int frameCounter_; | 
| 75 | > |  | 
| 76 | > | RealType MinQ_; | 
| 77 | > | RealType MaxQ_; | 
| 78 | > | RealType deltaQ_; | 
| 79 | > | RealType sumQ_; | 
| 80 | > | RealType sumQ2_; | 
| 81 | > | int Qcount_; | 
| 82 | > | std::vector<int> Q_histogram_; | 
| 83 | > |  | 
| 84 | > | RealType MinW_; | 
| 85 | > | RealType MaxW_; | 
| 86 | > | RealType deltaW_; | 
| 87 | > | RealType sumW_; | 
| 88 | > | RealType sumW2_; | 
| 89 | > | int Wcount_; | 
| 90 | > | std::vector<int> W_histogram_; | 
| 91 | > | }; | 
| 92 |  | } | 
| 93 |  |  | 
| 94 |  | #endif |