| 47 |
|
class GofXyz : public RadialDistrFunc { |
| 48 |
|
|
| 49 |
|
public: |
| 50 |
< |
GofXyz(SimInfo* info, const std::string& filename, const std::string& sele1, const std::string& sele2, double len, int nrbins); |
| 50 |
> |
GofXyz(SimInfo* info, const std::string& filename, const std::string& sele1, |
| 51 |
> |
const std::string& sele2, const std::string& sele3,double len, int nrbins); |
| 52 |
|
|
| 53 |
|
int getNRBins() { |
| 54 |
|
return nRBins_; |
| 64 |
|
void initalizeHistogram(); |
| 65 |
|
virtual void collectHistogram(StuntDouble* sd1, StuntDouble* sd2); |
| 66 |
|
virtual void writeRdf(); |
| 66 |
– |
|
| 67 |
– |
Vector3d getMolCom(StuntDouble* sd); |
| 67 |
|
|
| 68 |
|
//virtual void validateSelection1(SelectionManager& sman); |
| 69 |
|
|
| 71 |
|
double halfLen_; |
| 72 |
|
int nRBins_; |
| 73 |
|
double deltaR_; |
| 74 |
+ |
|
| 75 |
+ |
SelectionEvaluator evaluator3_; |
| 76 |
+ |
SelectionManager seleMan3_; |
| 77 |
|
|
| 78 |
|
std::vector<std::vector<std::vector<int> > > histogram_; |
| 79 |
|
|
| 80 |
< |
struct CoorSet { |
| 79 |
< |
Vector3d xaxis; |
| 80 |
< |
Vector3d yaxis; |
| 81 |
< |
Vector3d zaxis; |
| 82 |
< |
}; |
| 80 |
> |
std::map<int, RotMat3x3d> rotMats_; |
| 81 |
|
|
| 84 |
– |
std::map<int, CoorSet> coorSets_; |
| 85 |
– |
std::vector<Molecule*> atom2Mol_; |
| 82 |
|
}; |
| 83 |
|
|
| 84 |
|
|