| 44 |
|
* |
| 45 |
|
* Created by Xiuquan Sun on 05/09/06. |
| 46 |
|
* @author Xiuquan Sun |
| 47 |
< |
* @version $Id: Hxy.cpp,v 1.3 2006-05-16 20:38:23 gezelter Exp $ |
| 47 |
> |
* @version $Id: Hxy.cpp,v 1.4 2006-05-17 21:51:42 tim Exp $ |
| 48 |
|
* |
| 49 |
|
*/ |
| 50 |
|
|
| 92 |
|
int nFrames = reader.getNFrames(); |
| 93 |
|
nProcessed_ = nFrames/step_; |
| 94 |
|
|
| 95 |
< |
std::vector<double> mag, newmag; |
| 96 |
< |
double lenX_, lenY_; |
| 97 |
< |
double gridX_, gridY_; |
| 98 |
< |
double halfBoxX_, halfBoxY_; |
| 95 |
> |
std::vector<RealType> mag, newmag; |
| 96 |
> |
RealType lenX_, lenY_; |
| 97 |
> |
RealType gridX_, gridY_; |
| 98 |
> |
RealType halfBoxX_, halfBoxY_; |
| 99 |
|
int binNoX, binNoY; |
| 100 |
< |
double interpsum, value; |
| 100 |
> |
RealType interpsum, value; |
| 101 |
|
int ninterp, px, py, newp; |
| 102 |
|
int newx, newy, newindex, index; |
| 103 |
|
int new_i, new_j, new_index; |
| 104 |
< |
double freq_x, freq_y, zero_freq_x, zero_freq_y, freq; |
| 105 |
< |
double maxfreqx, maxfreqy, maxfreq, dfreq; |
| 104 |
> |
RealType freq_x, freq_y, zero_freq_x, zero_freq_y, freq; |
| 105 |
> |
RealType maxfreqx, maxfreqy, maxfreq, dfreq; |
| 106 |
|
int whichbin; |
| 107 |
|
int nMolecules; |
| 108 |
|
|
| 158 |
|
gridX_ = lenX_ /(nBinsX_); |
| 159 |
|
gridY_ = lenY_ /(nBinsY_); |
| 160 |
|
|
| 161 |
< |
double halfBoxX_ = lenX_ / 2.0; |
| 162 |
< |
double halfBoxY_ = lenY_ / 2.0; |
| 161 |
> |
RealType halfBoxX_ = lenX_ / 2.0; |
| 162 |
> |
RealType halfBoxY_ = lenY_ / 2.0; |
| 163 |
|
|
| 164 |
|
if (evaluator_.isDynamic()) { |
| 165 |
|
seleMan_.setSelectionSet(evaluator_.evaluate()); |
| 198 |
|
for(j = 0; j < nBinsY_; j++){ |
| 199 |
|
newindex = i * nBinsY_ + j; |
| 200 |
|
if(gridsample_[newindex] > 0){ |
| 201 |
< |
gridZ_[newindex] = gridZ_[newindex] / (double)gridsample_[newindex]; |
| 201 |
> |
gridZ_[newindex] = gridZ_[newindex] / (RealType)gridsample_[newindex]; |
| 202 |
|
} |
| 203 |
|
} |
| 204 |
|
} |
| 252 |
|
ninterp++; |
| 253 |
|
} |
| 254 |
|
|
| 255 |
< |
value = interpsum / (double)ninterp; |
| 255 |
> |
value = interpsum / (RealType)ninterp; |
| 256 |
|
|
| 257 |
|
gridZ_[newindex] = value; |
| 258 |
|
} |
| 333 |
|
// printf("%lf\t%lf\t%lf\t%lf\n", dx, dy, maxfreqx, maxfreqy); |
| 334 |
|
|
| 335 |
|
maxfreq = sqrt(maxfreqx*maxfreqx + maxfreqy*maxfreqy); |
| 336 |
< |
dfreq = maxfreq/(double)(nbins_-1); |
| 336 |
> |
dfreq = maxfreq/(RealType)(nbins_-1); |
| 337 |
|
|
| 338 |
|
//printf("%lf\n", dfreq); |
| 339 |
|
|
| 343 |
|
for (i=0; i< nBinsX_; i++) { |
| 344 |
|
for(j=0; j< nBinsY_; j++) { |
| 345 |
|
|
| 346 |
< |
freq_x = (double)(i - zero_freq_x)*maxfreqx*2 / nBinsX_; |
| 347 |
< |
freq_y = (double)(j - zero_freq_y)*maxfreqy*2 / nBinsY_; |
| 346 |
> |
freq_x = (RealType)(i - zero_freq_x)*maxfreqx*2 / nBinsX_; |
| 347 |
> |
freq_y = (RealType)(j - zero_freq_y)*maxfreqy*2 / nBinsY_; |
| 348 |
|
|
| 349 |
|
freq = sqrt(freq_x*freq_x + freq_y*freq_y); |
| 350 |
|
|
| 358 |
|
|
| 359 |
|
for ( i = 0; i < nbins_; i++) { |
| 360 |
|
if ( samples[i][istep] > 0) { |
| 361 |
< |
bin[i][istep] = 4.0 * sqrt(bin[i][istep] / (double)samples[i][istep]) / (double)nMolecules; |
| 361 |
> |
bin[i][istep] = 4.0 * sqrt(bin[i][istep] / (RealType)samples[i][istep]) / (RealType)nMolecules; |
| 362 |
|
} |
| 363 |
|
} |
| 364 |
|
|
| 369 |
|
sum_bin[i] += bin[i][j]; |
| 370 |
|
sum_bin_sq[i] += bin[i][j] * bin[i][j]; |
| 371 |
|
} |
| 372 |
< |
avg_bin[i] = sum_bin[i] / (double)nFrames; |
| 373 |
< |
avg_bin_sq[i] = sum_bin_sq[i] / (double)nFrames; |
| 372 |
> |
avg_bin[i] = sum_bin[i] / (RealType)nFrames; |
| 373 |
> |
avg_bin_sq[i] = sum_bin_sq[i] / (RealType)nFrames; |
| 374 |
|
for (int j = 0; j < nFrames; j++) { |
| 375 |
|
errbin_sum[i] += pow((bin[i][j] - avg_bin[i]), 2); |
| 376 |
|
errbin_sum_sq[i] += pow((bin[i][j] * bin[i][j] - avg_bin_sq[i]), 2); |
| 377 |
|
} |
| 378 |
< |
errbin[i] = sqrt( errbin_sum[i] / (double)nFrames ); |
| 379 |
< |
errbin_sq[i] = sqrt( errbin_sum_sq[i] / (double)nFrames ); |
| 378 |
> |
errbin[i] = sqrt( errbin_sum[i] / (RealType)nFrames ); |
| 379 |
> |
errbin_sq[i] = sqrt( errbin_sum_sq[i] / (RealType)nFrames ); |
| 380 |
|
} |
| 381 |
|
|
| 382 |
|
printSpectrum(); |