| 52 |  | #include "applications/staticProps/StaticPropsCmd.h" | 
| 53 |  | #include "applications/staticProps/StaticAnalyser.hpp" | 
| 54 |  | #include "applications/staticProps/GofR.hpp" | 
| 55 | + | #include "applications/staticProps/GofZ.hpp" | 
| 56 |  | #include "applications/staticProps/GofRAngle.hpp" | 
| 57 |  | #include "applications/staticProps/GofAngle2.hpp" | 
| 58 |  | #include "applications/staticProps/GofXyz.hpp" | 
| 59 |  | #include "applications/staticProps/P2OrderParameter.hpp" | 
| 60 |  | #include "applications/staticProps/BondOrderParameter.hpp" | 
| 61 | + | #include "applications/staticProps/BOPofR.hpp" | 
| 62 |  | #include "applications/staticProps/RippleOP.hpp" | 
| 63 |  | #include "applications/staticProps/SCDOrderParameter.hpp" | 
| 64 |  | #include "applications/staticProps/DensityPlot.hpp" | 
| 65 |  | #include "applications/staticProps/RhoZ.hpp" | 
| 66 | + | #include "applications/staticProps/BondAngleDistribution.hpp" | 
| 67 | + | #include "applications/staticProps/NanoVolume.hpp" | 
| 68 |  | #if defined(HAVE_FFTW_H) || defined(HAVE_DFFTW_H) || defined(HAVE_FFTW3_H) | 
| 69 |  | #include "applications/staticProps/Hxy.hpp" | 
| 70 |  | #endif | 
| 71 | + | #include "applications/staticProps/RhoR.hpp" | 
| 72 |  |  | 
| 73 |  | using namespace oopse; | 
| 74 |  |  | 
| 183 |  | if (args_info.gofr_given){ | 
| 184 |  | analyser= new GofR(info, dumpFileName, sele1, sele2, maxLen, | 
| 185 |  | args_info.nbins_arg); | 
| 186 | + | } else if (args_info.gofz_given) { | 
| 187 | + | analyser= new GofZ(info, dumpFileName, sele1, sele2, maxLen, | 
| 188 | + | args_info.nbins_arg); | 
| 189 |  | } else if (args_info.r_theta_given) { | 
| 190 |  | analyser  = new GofRTheta(info, dumpFileName, sele1, sele2, maxLen, | 
| 191 |  | args_info.nbins_arg, args_info.nanglebins_arg); | 
| 211 |  | } else if (args_info.rp2_given){ | 
| 212 |  | analyser = new RippleOP(info, dumpFileName, sele1, sele2); | 
| 213 |  | } else if (args_info.bo_given){ | 
| 214 | < | if (args_info.rcut_given && args_info.LegendreL_given) { | 
| 214 | > | if (args_info.rcut_given) { | 
| 215 |  | analyser = new BondOrderParameter(info, dumpFileName, sele1, | 
| 216 |  | args_info.rcut_arg, | 
| 209 | – | args_info.LegendreL_arg, | 
| 217 |  | args_info.nbins_arg); | 
| 218 |  | } else { | 
| 219 |  | sprintf( painCave.errMsg, | 
| 220 | < | "Both the cutoff radius (rcut) and LegendreL must be specified when calculating Bond Order Parameters"); | 
| 220 | > | "A cutoff radius (rcut) must be specified when calculating Bond Order Parameters"); | 
| 221 |  | painCave.severity = OOPSE_ERROR; | 
| 222 |  | painCave.isFatal = 1; | 
| 223 |  | simError(); | 
| 224 |  | } | 
| 225 | + | } else if (args_info.bor_given){ | 
| 226 | + | if (args_info.rcut_given) { | 
| 227 | + | analyser = new BOPofR(info, dumpFileName, sele1, args_info.rcut_arg, | 
| 228 | + | args_info.nbins_arg, maxLen); | 
| 229 | + | } else { | 
| 230 | + | sprintf( painCave.errMsg, | 
| 231 | + | "A cutoff radius (rcut) must be specified when calculating Bond Order Parameters"); | 
| 232 | + | painCave.severity = OOPSE_ERROR; | 
| 233 | + | painCave.isFatal = 1; | 
| 234 | + | simError(); | 
| 235 | + | } | 
| 236 | + | } else if (args_info.bad_given){ | 
| 237 | + | if (args_info.rcut_given) { | 
| 238 | + | analyser = new BondAngleDistribution(info, dumpFileName, sele1, args_info.rcut_arg, | 
| 239 | + | args_info.nbins_arg); | 
| 240 | + | } else { | 
| 241 | + | sprintf( painCave.errMsg, | 
| 242 | + | "A cutoff radius (rcut) must be specified when calculating Bond Angle Distributions"); | 
| 243 | + | painCave.severity = OOPSE_ERROR; | 
| 244 | + | painCave.isFatal = 1; | 
| 245 | + | simError(); | 
| 246 | + | } | 
| 247 |  | } else if (args_info.scd_given) { | 
| 248 |  | if (batchMode) { | 
| 249 |  | analyser  = new SCDOrderParameter(info, dumpFileName, args_info.molname_arg, | 
| 263 |  | analyser = new Hxy(info, dumpFileName, sele1, args_info.nbins_x_arg, | 
| 264 |  | args_info.nbins_y_arg, args_info.nbins_arg); | 
| 265 |  | #endif | 
| 266 | + | }else if (args_info.rho_r_given) { | 
| 267 | + | if (args_info.radius_given){ | 
| 268 | + | analyser = new RhoR(info, dumpFileName, sele1, maxLen,args_info.nbins_arg,args_info.radius_arg); | 
| 269 | + | }else{ | 
| 270 | + | sprintf( painCave.errMsg, | 
| 271 | + | "A particle radius (radius) must be specified when calculating Rho(r)"); | 
| 272 | + | painCave.severity = OOPSE_ERROR; | 
| 273 | + | painCave.isFatal = 1; | 
| 274 | + | simError(); | 
| 275 | + | } | 
| 276 | + | }else if (args_info.hullvol_given) { | 
| 277 | + | analyser = new NanoVolume(info, dumpFileName, sele1); | 
| 278 |  | } | 
| 279 |  |  | 
| 280 |  | if (args_info.output_given) { |