| 1 | /* | 
| 2 | File autogenerated by gengetopt version 2.19.1 | 
| 3 | generated with the following command: | 
| 4 | gengetopt --file-name=StaticPropsCmd -u | 
| 5 |  | 
| 6 | The developers of gengetopt consider the fixed text that goes in all | 
| 7 | gengetopt output files to be in the public domain: | 
| 8 | we make no copyright claims on it. | 
| 9 | */ | 
| 10 |  | 
| 11 | /* If we use autoconf.  */ | 
| 12 | #ifdef HAVE_CONFIG_H | 
| 13 | #include "config.h" | 
| 14 | #endif | 
| 15 |  | 
| 16 | #include <stdio.h> | 
| 17 | #include <stdlib.h> | 
| 18 | #include <string.h> | 
| 19 |  | 
| 20 | #include "getopt.h" | 
| 21 |  | 
| 22 | #include "StaticPropsCmd.h" | 
| 23 |  | 
| 24 | const char *gengetopt_args_info_purpose = ""; | 
| 25 |  | 
| 26 | const char *gengetopt_args_info_usage = "Usage: StaticProps [OPTIONS]... [FILES]..."; | 
| 27 |  | 
| 28 | const char *gengetopt_args_info_description = ""; | 
| 29 |  | 
| 30 | const char *gengetopt_args_info_help[] = { | 
| 31 | "  -h, --help                    Print help and exit", | 
| 32 | "  -V, --version                 Print version and exit", | 
| 33 | "  -i, --input=filename          input dump file", | 
| 34 | "  -o, --output=filename         output file name", | 
| 35 | "  -n, --step=INT                process every n frame  (default=`1')", | 
| 36 | "  -b, --nbins=INT               number of bins (general purpose)  \n                                  (default=`100')", | 
| 37 | "  -x, --nbins_x=INT             number of bins in x axis  (default=`100')", | 
| 38 | "  -y, --nbins_y=INT             number of bins in y axis  (default=`100')", | 
| 39 | "  -a, --nanglebins=INT          number of bins for cos(angle)  (default=`50')", | 
| 40 | "      --length=DOUBLE           maximum length (Defaults to 1/2 smallest length \n                                  of first frame)", | 
| 41 | "  -c, --rcut=DOUBLE             cutoff radius (rcut)", | 
| 42 | "  -z, --zoffset=DOUBLE          Where to set the zero for the slab_density \n                                  calculation  (default=`0')", | 
| 43 | "      --sele1=selection script  select the first stuntdouble set", | 
| 44 | "      --sele2=selection script  select the second stuntdouble set", | 
| 45 | "      --sele3=selection script  select the third stuntdouble set", | 
| 46 | "      --refsele=selection script\n                                select reference (use and only use with --gxyz)", | 
| 47 | "      --molname=STRING          molecule name", | 
| 48 | "      --begin=INT               begin internal index", | 
| 49 | "      --end=INT                 end internal index", | 
| 50 | "      --radius=DOUBLE           nanoparticle radius", | 
| 51 | "\n Group: staticProps\n   an option of this group is required", | 
| 52 | "      --bo                      bond order parameter (--rcut must be specified)", | 
| 53 | "      --bor                     bond order parameter as a function of radius \n                                  (--rcut must be specified)", | 
| 54 | "      --bad                     N(theta) bond angle density within (--rcut must \n                                  be specified)", | 
| 55 | "  -g, --gofr                    g(r)", | 
| 56 | "      --r_theta                 g(r, cos(theta))", | 
| 57 | "      --r_omega                 g(r, cos(omega))", | 
| 58 | "      --theta_omega             g(cos(theta), cos(omega))", | 
| 59 | "      --gxyz                    g(x, y, z)", | 
| 60 | "  -p, --p2                      p2 order parameter (--sele1 and --sele2 must be \n                                  specified)", | 
| 61 | "      --rp2                     rp2 order parameter (--sele1 and --sele2 must \n                                  be specified)", | 
| 62 | "  -s, --scd                     scd order parameter (either --sele1, --sele2, \n                                  --sele3 are specified or --molname, --begin, \n                                  --end are specified)", | 
| 63 | "  -d, --density                 density plot", | 
| 64 | "      --slab_density            slab density", | 
| 65 | "      --hxy                     hxy", | 
| 66 | "      --rho_r                   rho of R", | 
| 67 | "      --hullvol                 hull volume of nanoparticle", | 
| 68 | 0 | 
| 69 | }; | 
| 70 |  | 
| 71 | static | 
| 72 | void clear_given (struct gengetopt_args_info *args_info); | 
| 73 | static | 
| 74 | void clear_args (struct gengetopt_args_info *args_info); | 
| 75 |  | 
| 76 | static int | 
| 77 | cmdline_parser_internal (int argc, char * const *argv, struct gengetopt_args_info *args_info, int override, int initialize, int check_required, const char *additional_error); | 
| 78 |  | 
| 79 | static int | 
| 80 | cmdline_parser_required2 (struct gengetopt_args_info *args_info, const char *prog_name, const char *additional_error); | 
| 81 |  | 
| 82 | static char * | 
| 83 | gengetopt_strdup (const char *s); | 
| 84 |  | 
| 85 | static | 
| 86 | void clear_given (struct gengetopt_args_info *args_info) | 
| 87 | { | 
| 88 | args_info->help_given = 0 ; | 
| 89 | args_info->version_given = 0 ; | 
| 90 | args_info->input_given = 0 ; | 
| 91 | args_info->output_given = 0 ; | 
| 92 | args_info->step_given = 0 ; | 
| 93 | args_info->nbins_given = 0 ; | 
| 94 | args_info->nbins_x_given = 0 ; | 
| 95 | args_info->nbins_y_given = 0 ; | 
| 96 | args_info->nanglebins_given = 0 ; | 
| 97 | args_info->length_given = 0 ; | 
| 98 | args_info->rcut_given = 0 ; | 
| 99 | args_info->zoffset_given = 0 ; | 
| 100 | args_info->sele1_given = 0 ; | 
| 101 | args_info->sele2_given = 0 ; | 
| 102 | args_info->sele3_given = 0 ; | 
| 103 | args_info->refsele_given = 0 ; | 
| 104 | args_info->molname_given = 0 ; | 
| 105 | args_info->begin_given = 0 ; | 
| 106 | args_info->end_given = 0 ; | 
| 107 | args_info->radius_given = 0 ; | 
| 108 | args_info->bo_given = 0 ; | 
| 109 | args_info->bor_given = 0 ; | 
| 110 | args_info->bad_given = 0 ; | 
| 111 | args_info->gofr_given = 0 ; | 
| 112 | args_info->r_theta_given = 0 ; | 
| 113 | args_info->r_omega_given = 0 ; | 
| 114 | args_info->theta_omega_given = 0 ; | 
| 115 | args_info->gxyz_given = 0 ; | 
| 116 | args_info->p2_given = 0 ; | 
| 117 | args_info->rp2_given = 0 ; | 
| 118 | args_info->scd_given = 0 ; | 
| 119 | args_info->density_given = 0 ; | 
| 120 | args_info->slab_density_given = 0 ; | 
| 121 | args_info->hxy_given = 0 ; | 
| 122 | args_info->rho_r_given = 0 ; | 
| 123 | args_info->hullvol_given = 0 ; | 
| 124 | args_info->staticProps_group_counter = 0 ; | 
| 125 | } | 
| 126 |  | 
| 127 | static | 
| 128 | void clear_args (struct gengetopt_args_info *args_info) | 
| 129 | { | 
| 130 | args_info->input_arg = NULL; | 
| 131 | args_info->input_orig = NULL; | 
| 132 | args_info->output_arg = NULL; | 
| 133 | args_info->output_orig = NULL; | 
| 134 | args_info->step_arg = 1; | 
| 135 | args_info->step_orig = NULL; | 
| 136 | args_info->nbins_arg = 100; | 
| 137 | args_info->nbins_orig = NULL; | 
| 138 | args_info->nbins_x_arg = 100; | 
| 139 | args_info->nbins_x_orig = NULL; | 
| 140 | args_info->nbins_y_arg = 100; | 
| 141 | args_info->nbins_y_orig = NULL; | 
| 142 | args_info->nanglebins_arg = 50; | 
| 143 | args_info->nanglebins_orig = NULL; | 
| 144 | args_info->length_orig = NULL; | 
| 145 | args_info->rcut_orig = NULL; | 
| 146 | args_info->zoffset_arg = 0; | 
| 147 | args_info->zoffset_orig = NULL; | 
| 148 | args_info->sele1_arg = NULL; | 
| 149 | args_info->sele1_orig = NULL; | 
| 150 | args_info->sele2_arg = NULL; | 
| 151 | args_info->sele2_orig = NULL; | 
| 152 | args_info->sele3_arg = NULL; | 
| 153 | args_info->sele3_orig = NULL; | 
| 154 | args_info->refsele_arg = NULL; | 
| 155 | args_info->refsele_orig = NULL; | 
| 156 | args_info->molname_arg = NULL; | 
| 157 | args_info->molname_orig = NULL; | 
| 158 | args_info->begin_orig = NULL; | 
| 159 | args_info->end_orig = NULL; | 
| 160 | args_info->radius_orig = NULL; | 
| 161 |  | 
| 162 | } | 
| 163 |  | 
| 164 | static | 
| 165 | void init_args_info(struct gengetopt_args_info *args_info) | 
| 166 | { | 
| 167 | args_info->help_help = gengetopt_args_info_help[0] ; | 
| 168 | args_info->version_help = gengetopt_args_info_help[1] ; | 
| 169 | args_info->input_help = gengetopt_args_info_help[2] ; | 
| 170 | args_info->output_help = gengetopt_args_info_help[3] ; | 
| 171 | args_info->step_help = gengetopt_args_info_help[4] ; | 
| 172 | args_info->nbins_help = gengetopt_args_info_help[5] ; | 
| 173 | args_info->nbins_x_help = gengetopt_args_info_help[6] ; | 
| 174 | args_info->nbins_y_help = gengetopt_args_info_help[7] ; | 
| 175 | args_info->nanglebins_help = gengetopt_args_info_help[8] ; | 
| 176 | args_info->length_help = gengetopt_args_info_help[9] ; | 
| 177 | args_info->rcut_help = gengetopt_args_info_help[10] ; | 
| 178 | args_info->zoffset_help = gengetopt_args_info_help[11] ; | 
| 179 | args_info->sele1_help = gengetopt_args_info_help[12] ; | 
| 180 | args_info->sele2_help = gengetopt_args_info_help[13] ; | 
| 181 | args_info->sele3_help = gengetopt_args_info_help[14] ; | 
| 182 | args_info->refsele_help = gengetopt_args_info_help[15] ; | 
| 183 | args_info->molname_help = gengetopt_args_info_help[16] ; | 
| 184 | args_info->begin_help = gengetopt_args_info_help[17] ; | 
| 185 | args_info->end_help = gengetopt_args_info_help[18] ; | 
| 186 | args_info->radius_help = gengetopt_args_info_help[19] ; | 
| 187 | args_info->bo_help = gengetopt_args_info_help[20] ; | 
| 188 | args_info->bor_help = gengetopt_args_info_help[21] ; | 
| 189 | args_info->bad_help = gengetopt_args_info_help[22] ; | 
| 190 | args_info->gofr_help = gengetopt_args_info_help[23] ; | 
| 191 | args_info->r_theta_help = gengetopt_args_info_help[24] ; | 
| 192 | args_info->r_omega_help = gengetopt_args_info_help[25] ; | 
| 193 | args_info->theta_omega_help = gengetopt_args_info_help[26] ; | 
| 194 | args_info->gxyz_help = gengetopt_args_info_help[27] ; | 
| 195 | args_info->p2_help = gengetopt_args_info_help[28] ; | 
| 196 | args_info->rp2_help = gengetopt_args_info_help[29] ; | 
| 197 | args_info->scd_help = gengetopt_args_info_help[30] ; | 
| 198 | args_info->density_help = gengetopt_args_info_help[31] ; | 
| 199 | args_info->slab_density_help = gengetopt_args_info_help[32] ; | 
| 200 | args_info->hxy_help = gengetopt_args_info_help[33] ; | 
| 201 | args_info->rho_r_help = gengetopt_args_info_help[34] ; | 
| 202 | args_info->hullvol_help = gengetopt_args_info_help[35] ; | 
| 203 |  | 
| 204 | } | 
| 205 |  | 
| 206 | void | 
| 207 | cmdline_parser_print_version (void) | 
| 208 | { | 
| 209 | printf ("%s %s\n", CMDLINE_PARSER_PACKAGE, CMDLINE_PARSER_VERSION); | 
| 210 | } | 
| 211 |  | 
| 212 | void | 
| 213 | cmdline_parser_print_help (void) | 
| 214 | { | 
| 215 | int i = 0; | 
| 216 | cmdline_parser_print_version (); | 
| 217 |  | 
| 218 | if (strlen(gengetopt_args_info_purpose) > 0) | 
| 219 | printf("\n%s\n", gengetopt_args_info_purpose); | 
| 220 |  | 
| 221 | printf("\n%s\n\n", gengetopt_args_info_usage); | 
| 222 |  | 
| 223 | if (strlen(gengetopt_args_info_description) > 0) | 
| 224 | printf("%s\n", gengetopt_args_info_description); | 
| 225 |  | 
| 226 | while (gengetopt_args_info_help[i]) | 
| 227 | printf("%s\n", gengetopt_args_info_help[i++]); | 
| 228 | } | 
| 229 |  | 
| 230 | void | 
| 231 | cmdline_parser_init (struct gengetopt_args_info *args_info) | 
| 232 | { | 
| 233 | clear_given (args_info); | 
| 234 | clear_args (args_info); | 
| 235 | init_args_info (args_info); | 
| 236 |  | 
| 237 | args_info->inputs = NULL; | 
| 238 | args_info->inputs_num = 0; | 
| 239 | } | 
| 240 |  | 
| 241 | static void | 
| 242 | cmdline_parser_release (struct gengetopt_args_info *args_info) | 
| 243 | { | 
| 244 |  | 
| 245 | unsigned int i; | 
| 246 | if (args_info->input_arg) | 
| 247 | { | 
| 248 | free (args_info->input_arg); /* free previous argument */ | 
| 249 | args_info->input_arg = 0; | 
| 250 | } | 
| 251 | if (args_info->input_orig) | 
| 252 | { | 
| 253 | free (args_info->input_orig); /* free previous argument */ | 
| 254 | args_info->input_orig = 0; | 
| 255 | } | 
| 256 | if (args_info->output_arg) | 
| 257 | { | 
| 258 | free (args_info->output_arg); /* free previous argument */ | 
| 259 | args_info->output_arg = 0; | 
| 260 | } | 
| 261 | if (args_info->output_orig) | 
| 262 | { | 
| 263 | free (args_info->output_orig); /* free previous argument */ | 
| 264 | args_info->output_orig = 0; | 
| 265 | } | 
| 266 | if (args_info->step_orig) | 
| 267 | { | 
| 268 | free (args_info->step_orig); /* free previous argument */ | 
| 269 | args_info->step_orig = 0; | 
| 270 | } | 
| 271 | if (args_info->nbins_orig) | 
| 272 | { | 
| 273 | free (args_info->nbins_orig); /* free previous argument */ | 
| 274 | args_info->nbins_orig = 0; | 
| 275 | } | 
| 276 | if (args_info->nbins_x_orig) | 
| 277 | { | 
| 278 | free (args_info->nbins_x_orig); /* free previous argument */ | 
| 279 | args_info->nbins_x_orig = 0; | 
| 280 | } | 
| 281 | if (args_info->nbins_y_orig) | 
| 282 | { | 
| 283 | free (args_info->nbins_y_orig); /* free previous argument */ | 
| 284 | args_info->nbins_y_orig = 0; | 
| 285 | } | 
| 286 | if (args_info->nanglebins_orig) | 
| 287 | { | 
| 288 | free (args_info->nanglebins_orig); /* free previous argument */ | 
| 289 | args_info->nanglebins_orig = 0; | 
| 290 | } | 
| 291 | if (args_info->length_orig) | 
| 292 | { | 
| 293 | free (args_info->length_orig); /* free previous argument */ | 
| 294 | args_info->length_orig = 0; | 
| 295 | } | 
| 296 | if (args_info->rcut_orig) | 
| 297 | { | 
| 298 | free (args_info->rcut_orig); /* free previous argument */ | 
| 299 | args_info->rcut_orig = 0; | 
| 300 | } | 
| 301 | if (args_info->zoffset_orig) | 
| 302 | { | 
| 303 | free (args_info->zoffset_orig); /* free previous argument */ | 
| 304 | args_info->zoffset_orig = 0; | 
| 305 | } | 
| 306 | if (args_info->sele1_arg) | 
| 307 | { | 
| 308 | free (args_info->sele1_arg); /* free previous argument */ | 
| 309 | args_info->sele1_arg = 0; | 
| 310 | } | 
| 311 | if (args_info->sele1_orig) | 
| 312 | { | 
| 313 | free (args_info->sele1_orig); /* free previous argument */ | 
| 314 | args_info->sele1_orig = 0; | 
| 315 | } | 
| 316 | if (args_info->sele2_arg) | 
| 317 | { | 
| 318 | free (args_info->sele2_arg); /* free previous argument */ | 
| 319 | args_info->sele2_arg = 0; | 
| 320 | } | 
| 321 | if (args_info->sele2_orig) | 
| 322 | { | 
| 323 | free (args_info->sele2_orig); /* free previous argument */ | 
| 324 | args_info->sele2_orig = 0; | 
| 325 | } | 
| 326 | if (args_info->sele3_arg) | 
| 327 | { | 
| 328 | free (args_info->sele3_arg); /* free previous argument */ | 
| 329 | args_info->sele3_arg = 0; | 
| 330 | } | 
| 331 | if (args_info->sele3_orig) | 
| 332 | { | 
| 333 | free (args_info->sele3_orig); /* free previous argument */ | 
| 334 | args_info->sele3_orig = 0; | 
| 335 | } | 
| 336 | if (args_info->refsele_arg) | 
| 337 | { | 
| 338 | free (args_info->refsele_arg); /* free previous argument */ | 
| 339 | args_info->refsele_arg = 0; | 
| 340 | } | 
| 341 | if (args_info->refsele_orig) | 
| 342 | { | 
| 343 | free (args_info->refsele_orig); /* free previous argument */ | 
| 344 | args_info->refsele_orig = 0; | 
| 345 | } | 
| 346 | if (args_info->molname_arg) | 
| 347 | { | 
| 348 | free (args_info->molname_arg); /* free previous argument */ | 
| 349 | args_info->molname_arg = 0; | 
| 350 | } | 
| 351 | if (args_info->molname_orig) | 
| 352 | { | 
| 353 | free (args_info->molname_orig); /* free previous argument */ | 
| 354 | args_info->molname_orig = 0; | 
| 355 | } | 
| 356 | if (args_info->begin_orig) | 
| 357 | { | 
| 358 | free (args_info->begin_orig); /* free previous argument */ | 
| 359 | args_info->begin_orig = 0; | 
| 360 | } | 
| 361 | if (args_info->end_orig) | 
| 362 | { | 
| 363 | free (args_info->end_orig); /* free previous argument */ | 
| 364 | args_info->end_orig = 0; | 
| 365 | } | 
| 366 | if (args_info->radius_orig) | 
| 367 | { | 
| 368 | free (args_info->radius_orig); /* free previous argument */ | 
| 369 | args_info->radius_orig = 0; | 
| 370 | } | 
| 371 |  | 
| 372 | for (i = 0; i < args_info->inputs_num; ++i) | 
| 373 | free (args_info->inputs [i]); | 
| 374 |  | 
| 375 | if (args_info->inputs_num) | 
| 376 | free (args_info->inputs); | 
| 377 |  | 
| 378 | clear_given (args_info); | 
| 379 | } | 
| 380 |  | 
| 381 | int | 
| 382 | cmdline_parser_file_save(const char *filename, struct gengetopt_args_info *args_info) | 
| 383 | { | 
| 384 | FILE *outfile; | 
| 385 | int i = 0; | 
| 386 |  | 
| 387 | outfile = fopen(filename, "w"); | 
| 388 |  | 
| 389 | if (!outfile) | 
| 390 | { | 
| 391 | fprintf (stderr, "%s: cannot open file for writing: %s\n", CMDLINE_PARSER_PACKAGE, filename); | 
| 392 | return EXIT_FAILURE; | 
| 393 | } | 
| 394 |  | 
| 395 | if (args_info->help_given) { | 
| 396 | fprintf(outfile, "%s\n", "help"); | 
| 397 | } | 
| 398 | if (args_info->version_given) { | 
| 399 | fprintf(outfile, "%s\n", "version"); | 
| 400 | } | 
| 401 | if (args_info->input_given) { | 
| 402 | if (args_info->input_orig) { | 
| 403 | fprintf(outfile, "%s=\"%s\"\n", "input", args_info->input_orig); | 
| 404 | } else { | 
| 405 | fprintf(outfile, "%s\n", "input"); | 
| 406 | } | 
| 407 | } | 
| 408 | if (args_info->output_given) { | 
| 409 | if (args_info->output_orig) { | 
| 410 | fprintf(outfile, "%s=\"%s\"\n", "output", args_info->output_orig); | 
| 411 | } else { | 
| 412 | fprintf(outfile, "%s\n", "output"); | 
| 413 | } | 
| 414 | } | 
| 415 | if (args_info->step_given) { | 
| 416 | if (args_info->step_orig) { | 
| 417 | fprintf(outfile, "%s=\"%s\"\n", "step", args_info->step_orig); | 
| 418 | } else { | 
| 419 | fprintf(outfile, "%s\n", "step"); | 
| 420 | } | 
| 421 | } | 
| 422 | if (args_info->nbins_given) { | 
| 423 | if (args_info->nbins_orig) { | 
| 424 | fprintf(outfile, "%s=\"%s\"\n", "nbins", args_info->nbins_orig); | 
| 425 | } else { | 
| 426 | fprintf(outfile, "%s\n", "nbins"); | 
| 427 | } | 
| 428 | } | 
| 429 | if (args_info->nbins_x_given) { | 
| 430 | if (args_info->nbins_x_orig) { | 
| 431 | fprintf(outfile, "%s=\"%s\"\n", "nbins_x", args_info->nbins_x_orig); | 
| 432 | } else { | 
| 433 | fprintf(outfile, "%s\n", "nbins_x"); | 
| 434 | } | 
| 435 | } | 
| 436 | if (args_info->nbins_y_given) { | 
| 437 | if (args_info->nbins_y_orig) { | 
| 438 | fprintf(outfile, "%s=\"%s\"\n", "nbins_y", args_info->nbins_y_orig); | 
| 439 | } else { | 
| 440 | fprintf(outfile, "%s\n", "nbins_y"); | 
| 441 | } | 
| 442 | } | 
| 443 | if (args_info->nanglebins_given) { | 
| 444 | if (args_info->nanglebins_orig) { | 
| 445 | fprintf(outfile, "%s=\"%s\"\n", "nanglebins", args_info->nanglebins_orig); | 
| 446 | } else { | 
| 447 | fprintf(outfile, "%s\n", "nanglebins"); | 
| 448 | } | 
| 449 | } | 
| 450 | if (args_info->length_given) { | 
| 451 | if (args_info->length_orig) { | 
| 452 | fprintf(outfile, "%s=\"%s\"\n", "length", args_info->length_orig); | 
| 453 | } else { | 
| 454 | fprintf(outfile, "%s\n", "length"); | 
| 455 | } | 
| 456 | } | 
| 457 | if (args_info->rcut_given) { | 
| 458 | if (args_info->rcut_orig) { | 
| 459 | fprintf(outfile, "%s=\"%s\"\n", "rcut", args_info->rcut_orig); | 
| 460 | } else { | 
| 461 | fprintf(outfile, "%s\n", "rcut"); | 
| 462 | } | 
| 463 | } | 
| 464 | if (args_info->zoffset_given) { | 
| 465 | if (args_info->zoffset_orig) { | 
| 466 | fprintf(outfile, "%s=\"%s\"\n", "zoffset", args_info->zoffset_orig); | 
| 467 | } else { | 
| 468 | fprintf(outfile, "%s\n", "zoffset"); | 
| 469 | } | 
| 470 | } | 
| 471 | if (args_info->sele1_given) { | 
| 472 | if (args_info->sele1_orig) { | 
| 473 | fprintf(outfile, "%s=\"%s\"\n", "sele1", args_info->sele1_orig); | 
| 474 | } else { | 
| 475 | fprintf(outfile, "%s\n", "sele1"); | 
| 476 | } | 
| 477 | } | 
| 478 | if (args_info->sele2_given) { | 
| 479 | if (args_info->sele2_orig) { | 
| 480 | fprintf(outfile, "%s=\"%s\"\n", "sele2", args_info->sele2_orig); | 
| 481 | } else { | 
| 482 | fprintf(outfile, "%s\n", "sele2"); | 
| 483 | } | 
| 484 | } | 
| 485 | if (args_info->sele3_given) { | 
| 486 | if (args_info->sele3_orig) { | 
| 487 | fprintf(outfile, "%s=\"%s\"\n", "sele3", args_info->sele3_orig); | 
| 488 | } else { | 
| 489 | fprintf(outfile, "%s\n", "sele3"); | 
| 490 | } | 
| 491 | } | 
| 492 | if (args_info->refsele_given) { | 
| 493 | if (args_info->refsele_orig) { | 
| 494 | fprintf(outfile, "%s=\"%s\"\n", "refsele", args_info->refsele_orig); | 
| 495 | } else { | 
| 496 | fprintf(outfile, "%s\n", "refsele"); | 
| 497 | } | 
| 498 | } | 
| 499 | if (args_info->molname_given) { | 
| 500 | if (args_info->molname_orig) { | 
| 501 | fprintf(outfile, "%s=\"%s\"\n", "molname", args_info->molname_orig); | 
| 502 | } else { | 
| 503 | fprintf(outfile, "%s\n", "molname"); | 
| 504 | } | 
| 505 | } | 
| 506 | if (args_info->begin_given) { | 
| 507 | if (args_info->begin_orig) { | 
| 508 | fprintf(outfile, "%s=\"%s\"\n", "begin", args_info->begin_orig); | 
| 509 | } else { | 
| 510 | fprintf(outfile, "%s\n", "begin"); | 
| 511 | } | 
| 512 | } | 
| 513 | if (args_info->end_given) { | 
| 514 | if (args_info->end_orig) { | 
| 515 | fprintf(outfile, "%s=\"%s\"\n", "end", args_info->end_orig); | 
| 516 | } else { | 
| 517 | fprintf(outfile, "%s\n", "end"); | 
| 518 | } | 
| 519 | } | 
| 520 | if (args_info->radius_given) { | 
| 521 | if (args_info->radius_orig) { | 
| 522 | fprintf(outfile, "%s=\"%s\"\n", "radius", args_info->radius_orig); | 
| 523 | } else { | 
| 524 | fprintf(outfile, "%s\n", "radius"); | 
| 525 | } | 
| 526 | } | 
| 527 | if (args_info->bo_given) { | 
| 528 | fprintf(outfile, "%s\n", "bo"); | 
| 529 | } | 
| 530 | if (args_info->bor_given) { | 
| 531 | fprintf(outfile, "%s\n", "bor"); | 
| 532 | } | 
| 533 | if (args_info->bad_given) { | 
| 534 | fprintf(outfile, "%s\n", "bad"); | 
| 535 | } | 
| 536 | if (args_info->gofr_given) { | 
| 537 | fprintf(outfile, "%s\n", "gofr"); | 
| 538 | } | 
| 539 | if (args_info->r_theta_given) { | 
| 540 | fprintf(outfile, "%s\n", "r_theta"); | 
| 541 | } | 
| 542 | if (args_info->r_omega_given) { | 
| 543 | fprintf(outfile, "%s\n", "r_omega"); | 
| 544 | } | 
| 545 | if (args_info->theta_omega_given) { | 
| 546 | fprintf(outfile, "%s\n", "theta_omega"); | 
| 547 | } | 
| 548 | if (args_info->gxyz_given) { | 
| 549 | fprintf(outfile, "%s\n", "gxyz"); | 
| 550 | } | 
| 551 | if (args_info->p2_given) { | 
| 552 | fprintf(outfile, "%s\n", "p2"); | 
| 553 | } | 
| 554 | if (args_info->rp2_given) { | 
| 555 | fprintf(outfile, "%s\n", "rp2"); | 
| 556 | } | 
| 557 | if (args_info->scd_given) { | 
| 558 | fprintf(outfile, "%s\n", "scd"); | 
| 559 | } | 
| 560 | if (args_info->density_given) { | 
| 561 | fprintf(outfile, "%s\n", "density"); | 
| 562 | } | 
| 563 | if (args_info->slab_density_given) { | 
| 564 | fprintf(outfile, "%s\n", "slab_density"); | 
| 565 | } | 
| 566 | if (args_info->hxy_given) { | 
| 567 | fprintf(outfile, "%s\n", "hxy"); | 
| 568 | } | 
| 569 | if (args_info->rho_r_given) { | 
| 570 | fprintf(outfile, "%s\n", "rho_r"); | 
| 571 | } | 
| 572 | if (args_info->hullvol_given) { | 
| 573 | fprintf(outfile, "%s\n", "hullvol"); | 
| 574 | } | 
| 575 |  | 
| 576 | fclose (outfile); | 
| 577 |  | 
| 578 | i = EXIT_SUCCESS; | 
| 579 | return i; | 
| 580 | } | 
| 581 |  | 
| 582 | void | 
| 583 | cmdline_parser_free (struct gengetopt_args_info *args_info) | 
| 584 | { | 
| 585 | cmdline_parser_release (args_info); | 
| 586 | } | 
| 587 |  | 
| 588 |  | 
| 589 | /* gengetopt_strdup() */ | 
| 590 | /* strdup.c replacement of strdup, which is not standard */ | 
| 591 | char * | 
| 592 | gengetopt_strdup (const char *s) | 
| 593 | { | 
| 594 | char *result = NULL; | 
| 595 | if (!s) | 
| 596 | return result; | 
| 597 |  | 
| 598 | result = (char*)malloc(strlen(s) + 1); | 
| 599 | if (result == (char*)0) | 
| 600 | return (char*)0; | 
| 601 | strcpy(result, s); | 
| 602 | return result; | 
| 603 | } | 
| 604 |  | 
| 605 | static void | 
| 606 | reset_group_staticProps(struct gengetopt_args_info *args_info); | 
| 607 |  | 
| 608 | static void | 
| 609 | reset_group_staticProps(struct gengetopt_args_info *args_info) | 
| 610 | { | 
| 611 | if (! args_info->staticProps_group_counter) | 
| 612 | return; | 
| 613 |  | 
| 614 | args_info->bo_given = 0 ; | 
| 615 | args_info->bor_given = 0 ; | 
| 616 | args_info->bad_given = 0 ; | 
| 617 | args_info->gofr_given = 0 ; | 
| 618 | args_info->r_theta_given = 0 ; | 
| 619 | args_info->r_omega_given = 0 ; | 
| 620 | args_info->theta_omega_given = 0 ; | 
| 621 | args_info->gxyz_given = 0 ; | 
| 622 | args_info->p2_given = 0 ; | 
| 623 | args_info->rp2_given = 0 ; | 
| 624 | args_info->scd_given = 0 ; | 
| 625 | args_info->density_given = 0 ; | 
| 626 | args_info->slab_density_given = 0 ; | 
| 627 | args_info->hxy_given = 0 ; | 
| 628 | args_info->rho_r_given = 0 ; | 
| 629 | args_info->hullvol_given = 0 ; | 
| 630 |  | 
| 631 | args_info->staticProps_group_counter = 0; | 
| 632 | } | 
| 633 |  | 
| 634 | int | 
| 635 | cmdline_parser (int argc, char * const *argv, struct gengetopt_args_info *args_info) | 
| 636 | { | 
| 637 | return cmdline_parser2 (argc, argv, args_info, 0, 1, 1); | 
| 638 | } | 
| 639 |  | 
| 640 | int | 
| 641 | cmdline_parser2 (int argc, char * const *argv, struct gengetopt_args_info *args_info, int override, int initialize, int check_required) | 
| 642 | { | 
| 643 | int result; | 
| 644 |  | 
| 645 | result = cmdline_parser_internal (argc, argv, args_info, override, initialize, check_required, NULL); | 
| 646 |  | 
| 647 | if (result == EXIT_FAILURE) | 
| 648 | { | 
| 649 | cmdline_parser_free (args_info); | 
| 650 | exit (EXIT_FAILURE); | 
| 651 | } | 
| 652 |  | 
| 653 | return result; | 
| 654 | } | 
| 655 |  | 
| 656 | int | 
| 657 | cmdline_parser_required (struct gengetopt_args_info *args_info, const char *prog_name) | 
| 658 | { | 
| 659 | int result = EXIT_SUCCESS; | 
| 660 |  | 
| 661 | if (cmdline_parser_required2(args_info, prog_name, NULL) > 0) | 
| 662 | result = EXIT_FAILURE; | 
| 663 |  | 
| 664 | if (result == EXIT_FAILURE) | 
| 665 | { | 
| 666 | cmdline_parser_free (args_info); | 
| 667 | exit (EXIT_FAILURE); | 
| 668 | } | 
| 669 |  | 
| 670 | return result; | 
| 671 | } | 
| 672 |  | 
| 673 | int | 
| 674 | cmdline_parser_required2 (struct gengetopt_args_info *args_info, const char *prog_name, const char *additional_error) | 
| 675 | { | 
| 676 | int error = 0; | 
| 677 |  | 
| 678 | /* checks for required options */ | 
| 679 | if (! args_info->input_given) | 
| 680 | { | 
| 681 | fprintf (stderr, "%s: '--input' ('-i') option required%s\n", prog_name, (additional_error ? additional_error : "")); | 
| 682 | error = 1; | 
| 683 | } | 
| 684 |  | 
| 685 | if (args_info->staticProps_group_counter == 0) | 
| 686 | { | 
| 687 | fprintf (stderr, "%s: %d options of group staticProps were given. One is required.%s\n", prog_name, args_info->staticProps_group_counter, (additional_error ? additional_error : "")); | 
| 688 | error = 1; | 
| 689 | } | 
| 690 |  | 
| 691 |  | 
| 692 | /* checks for dependences among options */ | 
| 693 |  | 
| 694 | return error; | 
| 695 | } | 
| 696 |  | 
| 697 | int | 
| 698 | cmdline_parser_internal (int argc, char * const *argv, struct gengetopt_args_info *args_info, int override, int initialize, int check_required, const char *additional_error) | 
| 699 | { | 
| 700 | int c;        /* Character of the parsed option.  */ | 
| 701 |  | 
| 702 | int error = 0; | 
| 703 | struct gengetopt_args_info local_args_info; | 
| 704 |  | 
| 705 | if (initialize) | 
| 706 | cmdline_parser_init (args_info); | 
| 707 |  | 
| 708 | cmdline_parser_init (&local_args_info); | 
| 709 |  | 
| 710 | optarg = 0; | 
| 711 | optind = 0; | 
| 712 | opterr = 1; | 
| 713 | optopt = '?'; | 
| 714 |  | 
| 715 | while (1) | 
| 716 | { | 
| 717 | int option_index = 0; | 
| 718 | char *stop_char; | 
| 719 |  | 
| 720 | static struct option long_options[] = { | 
| 721 | { "help",       0, NULL, 'h' }, | 
| 722 | { "version",    0, NULL, 'V' }, | 
| 723 | { "input",      1, NULL, 'i' }, | 
| 724 | { "output",     1, NULL, 'o' }, | 
| 725 | { "step",       1, NULL, 'n' }, | 
| 726 | { "nbins",      1, NULL, 'b' }, | 
| 727 | { "nbins_x",    1, NULL, 'x' }, | 
| 728 | { "nbins_y",    1, NULL, 'y' }, | 
| 729 | { "nanglebins", 1, NULL, 'a' }, | 
| 730 | { "length",     1, NULL, 0 }, | 
| 731 | { "rcut",       1, NULL, 'c' }, | 
| 732 | { "zoffset",    1, NULL, 'z' }, | 
| 733 | { "sele1",      1, NULL, 0 }, | 
| 734 | { "sele2",      1, NULL, 0 }, | 
| 735 | { "sele3",      1, NULL, 0 }, | 
| 736 | { "refsele",    1, NULL, 0 }, | 
| 737 | { "molname",    1, NULL, 0 }, | 
| 738 | { "begin",      1, NULL, 0 }, | 
| 739 | { "end",        1, NULL, 0 }, | 
| 740 | { "radius",     1, NULL, 0 }, | 
| 741 | { "bo", 0, NULL, 0 }, | 
| 742 | { "bor",        0, NULL, 0 }, | 
| 743 | { "bad",        0, NULL, 0 }, | 
| 744 | { "gofr",       0, NULL, 'g' }, | 
| 745 | { "r_theta",    0, NULL, 0 }, | 
| 746 | { "r_omega",    0, NULL, 0 }, | 
| 747 | { "theta_omega",        0, NULL, 0 }, | 
| 748 | { "gxyz",       0, NULL, 0 }, | 
| 749 | { "p2", 0, NULL, 'p' }, | 
| 750 | { "rp2",        0, NULL, 0 }, | 
| 751 | { "scd",        0, NULL, 's' }, | 
| 752 | { "density",    0, NULL, 'd' }, | 
| 753 | { "slab_density",       0, NULL, 0 }, | 
| 754 | { "hxy",        0, NULL, 0 }, | 
| 755 | { "rho_r",      0, NULL, 0 }, | 
| 756 | { "hullvol",    0, NULL, 0 }, | 
| 757 | { NULL, 0, NULL, 0 } | 
| 758 | }; | 
| 759 |  | 
| 760 | stop_char = 0; | 
| 761 | c = getopt_long (argc, argv, "hVi:o:n:b:x:y:a:c:z:gpsd", long_options, &option_index); | 
| 762 |  | 
| 763 | if (c == -1) break;       /* Exit from `while (1)' loop.  */ | 
| 764 |  | 
| 765 | switch (c) | 
| 766 | { | 
| 767 | case 'h':       /* Print help and exit.  */ | 
| 768 | cmdline_parser_print_help (); | 
| 769 | cmdline_parser_free (&local_args_info); | 
| 770 | exit (EXIT_SUCCESS); | 
| 771 |  | 
| 772 | case 'V':       /* Print version and exit.  */ | 
| 773 | cmdline_parser_print_version (); | 
| 774 | cmdline_parser_free (&local_args_info); | 
| 775 | exit (EXIT_SUCCESS); | 
| 776 |  | 
| 777 | case 'i':       /* input dump file.  */ | 
| 778 | if (local_args_info.input_given) | 
| 779 | { | 
| 780 | fprintf (stderr, "%s: `--input' (`-i') option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); | 
| 781 | goto failure; | 
| 782 | } | 
| 783 | if (args_info->input_given && ! override) | 
| 784 | continue; | 
| 785 | local_args_info.input_given = 1; | 
| 786 | args_info->input_given = 1; | 
| 787 | if (args_info->input_arg) | 
| 788 | free (args_info->input_arg); /* free previous string */ | 
| 789 | args_info->input_arg = gengetopt_strdup (optarg); | 
| 790 | if (args_info->input_orig) | 
| 791 | free (args_info->input_orig); /* free previous string */ | 
| 792 | args_info->input_orig = gengetopt_strdup (optarg); | 
| 793 | break; | 
| 794 |  | 
| 795 | case 'o':       /* output file name.  */ | 
| 796 | if (local_args_info.output_given) | 
| 797 | { | 
| 798 | fprintf (stderr, "%s: `--output' (`-o') option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); | 
| 799 | goto failure; | 
| 800 | } | 
| 801 | if (args_info->output_given && ! override) | 
| 802 | continue; | 
| 803 | local_args_info.output_given = 1; | 
| 804 | args_info->output_given = 1; | 
| 805 | if (args_info->output_arg) | 
| 806 | free (args_info->output_arg); /* free previous string */ | 
| 807 | args_info->output_arg = gengetopt_strdup (optarg); | 
| 808 | if (args_info->output_orig) | 
| 809 | free (args_info->output_orig); /* free previous string */ | 
| 810 | args_info->output_orig = gengetopt_strdup (optarg); | 
| 811 | break; | 
| 812 |  | 
| 813 | case 'n':       /* process every n frame.  */ | 
| 814 | if (local_args_info.step_given) | 
| 815 | { | 
| 816 | fprintf (stderr, "%s: `--step' (`-n') option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); | 
| 817 | goto failure; | 
| 818 | } | 
| 819 | if (args_info->step_given && ! override) | 
| 820 | continue; | 
| 821 | local_args_info.step_given = 1; | 
| 822 | args_info->step_given = 1; | 
| 823 | args_info->step_arg = strtol (optarg, &stop_char, 0); | 
| 824 | if (!(stop_char && *stop_char == '\0')) { | 
| 825 | fprintf(stderr, "%s: invalid numeric value: %s\n", argv[0], optarg); | 
| 826 | goto failure; | 
| 827 | } | 
| 828 | if (args_info->step_orig) | 
| 829 | free (args_info->step_orig); /* free previous string */ | 
| 830 | args_info->step_orig = gengetopt_strdup (optarg); | 
| 831 | break; | 
| 832 |  | 
| 833 | case 'b':       /* number of bins (general purpose).  */ | 
| 834 | if (local_args_info.nbins_given) | 
| 835 | { | 
| 836 | fprintf (stderr, "%s: `--nbins' (`-b') option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); | 
| 837 | goto failure; | 
| 838 | } | 
| 839 | if (args_info->nbins_given && ! override) | 
| 840 | continue; | 
| 841 | local_args_info.nbins_given = 1; | 
| 842 | args_info->nbins_given = 1; | 
| 843 | args_info->nbins_arg = strtol (optarg, &stop_char, 0); | 
| 844 | if (!(stop_char && *stop_char == '\0')) { | 
| 845 | fprintf(stderr, "%s: invalid numeric value: %s\n", argv[0], optarg); | 
| 846 | goto failure; | 
| 847 | } | 
| 848 | if (args_info->nbins_orig) | 
| 849 | free (args_info->nbins_orig); /* free previous string */ | 
| 850 | args_info->nbins_orig = gengetopt_strdup (optarg); | 
| 851 | break; | 
| 852 |  | 
| 853 | case 'x':       /* number of bins in x axis.  */ | 
| 854 | if (local_args_info.nbins_x_given) | 
| 855 | { | 
| 856 | fprintf (stderr, "%s: `--nbins_x' (`-x') option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); | 
| 857 | goto failure; | 
| 858 | } | 
| 859 | if (args_info->nbins_x_given && ! override) | 
| 860 | continue; | 
| 861 | local_args_info.nbins_x_given = 1; | 
| 862 | args_info->nbins_x_given = 1; | 
| 863 | args_info->nbins_x_arg = strtol (optarg, &stop_char, 0); | 
| 864 | if (!(stop_char && *stop_char == '\0')) { | 
| 865 | fprintf(stderr, "%s: invalid numeric value: %s\n", argv[0], optarg); | 
| 866 | goto failure; | 
| 867 | } | 
| 868 | if (args_info->nbins_x_orig) | 
| 869 | free (args_info->nbins_x_orig); /* free previous string */ | 
| 870 | args_info->nbins_x_orig = gengetopt_strdup (optarg); | 
| 871 | break; | 
| 872 |  | 
| 873 | case 'y':       /* number of bins in y axis.  */ | 
| 874 | if (local_args_info.nbins_y_given) | 
| 875 | { | 
| 876 | fprintf (stderr, "%s: `--nbins_y' (`-y') option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); | 
| 877 | goto failure; | 
| 878 | } | 
| 879 | if (args_info->nbins_y_given && ! override) | 
| 880 | continue; | 
| 881 | local_args_info.nbins_y_given = 1; | 
| 882 | args_info->nbins_y_given = 1; | 
| 883 | args_info->nbins_y_arg = strtol (optarg, &stop_char, 0); | 
| 884 | if (!(stop_char && *stop_char == '\0')) { | 
| 885 | fprintf(stderr, "%s: invalid numeric value: %s\n", argv[0], optarg); | 
| 886 | goto failure; | 
| 887 | } | 
| 888 | if (args_info->nbins_y_orig) | 
| 889 | free (args_info->nbins_y_orig); /* free previous string */ | 
| 890 | args_info->nbins_y_orig = gengetopt_strdup (optarg); | 
| 891 | break; | 
| 892 |  | 
| 893 | case 'a':       /* number of bins for cos(angle).  */ | 
| 894 | if (local_args_info.nanglebins_given) | 
| 895 | { | 
| 896 | fprintf (stderr, "%s: `--nanglebins' (`-a') option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); | 
| 897 | goto failure; | 
| 898 | } | 
| 899 | if (args_info->nanglebins_given && ! override) | 
| 900 | continue; | 
| 901 | local_args_info.nanglebins_given = 1; | 
| 902 | args_info->nanglebins_given = 1; | 
| 903 | args_info->nanglebins_arg = strtol (optarg, &stop_char, 0); | 
| 904 | if (!(stop_char && *stop_char == '\0')) { | 
| 905 | fprintf(stderr, "%s: invalid numeric value: %s\n", argv[0], optarg); | 
| 906 | goto failure; | 
| 907 | } | 
| 908 | if (args_info->nanglebins_orig) | 
| 909 | free (args_info->nanglebins_orig); /* free previous string */ | 
| 910 | args_info->nanglebins_orig = gengetopt_strdup (optarg); | 
| 911 | break; | 
| 912 |  | 
| 913 | case 'c':       /* cutoff radius (rcut).  */ | 
| 914 | if (local_args_info.rcut_given) | 
| 915 | { | 
| 916 | fprintf (stderr, "%s: `--rcut' (`-c') option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); | 
| 917 | goto failure; | 
| 918 | } | 
| 919 | if (args_info->rcut_given && ! override) | 
| 920 | continue; | 
| 921 | local_args_info.rcut_given = 1; | 
| 922 | args_info->rcut_given = 1; | 
| 923 | args_info->rcut_arg = strtod (optarg, &stop_char); | 
| 924 | if (!(stop_char && *stop_char == '\0')) { | 
| 925 | fprintf(stderr, "%s: invalid numeric value: %s\n", argv[0], optarg); | 
| 926 | goto failure; | 
| 927 | } | 
| 928 | if (args_info->rcut_orig) | 
| 929 | free (args_info->rcut_orig); /* free previous string */ | 
| 930 | args_info->rcut_orig = gengetopt_strdup (optarg); | 
| 931 | break; | 
| 932 |  | 
| 933 | case 'z':       /* Where to set the zero for the slab_density calculation.  */ | 
| 934 | if (local_args_info.zoffset_given) | 
| 935 | { | 
| 936 | fprintf (stderr, "%s: `--zoffset' (`-z') option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); | 
| 937 | goto failure; | 
| 938 | } | 
| 939 | if (args_info->zoffset_given && ! override) | 
| 940 | continue; | 
| 941 | local_args_info.zoffset_given = 1; | 
| 942 | args_info->zoffset_given = 1; | 
| 943 | args_info->zoffset_arg = strtod (optarg, &stop_char); | 
| 944 | if (!(stop_char && *stop_char == '\0')) { | 
| 945 | fprintf(stderr, "%s: invalid numeric value: %s\n", argv[0], optarg); | 
| 946 | goto failure; | 
| 947 | } | 
| 948 | if (args_info->zoffset_orig) | 
| 949 | free (args_info->zoffset_orig); /* free previous string */ | 
| 950 | args_info->zoffset_orig = gengetopt_strdup (optarg); | 
| 951 | break; | 
| 952 |  | 
| 953 | case 'g':       /* g(r).  */ | 
| 954 | if (local_args_info.gofr_given) | 
| 955 | { | 
| 956 | fprintf (stderr, "%s: `--gofr' (`-g') option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); | 
| 957 | goto failure; | 
| 958 | } | 
| 959 | if (args_info->gofr_given && ! override) | 
| 960 | continue; | 
| 961 | local_args_info.gofr_given = 1; | 
| 962 | args_info->gofr_given = 1; | 
| 963 | if (args_info->staticProps_group_counter && override) | 
| 964 | reset_group_staticProps (args_info); | 
| 965 | args_info->staticProps_group_counter += 1; | 
| 966 | break; | 
| 967 |  | 
| 968 | case 'p':       /* p2 order parameter (--sele1 and --sele2 must be specified).  */ | 
| 969 | if (local_args_info.p2_given) | 
| 970 | { | 
| 971 | fprintf (stderr, "%s: `--p2' (`-p') option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); | 
| 972 | goto failure; | 
| 973 | } | 
| 974 | if (args_info->p2_given && ! override) | 
| 975 | continue; | 
| 976 | local_args_info.p2_given = 1; | 
| 977 | args_info->p2_given = 1; | 
| 978 | if (args_info->staticProps_group_counter && override) | 
| 979 | reset_group_staticProps (args_info); | 
| 980 | args_info->staticProps_group_counter += 1; | 
| 981 | break; | 
| 982 |  | 
| 983 | case 's':       /* scd order parameter (either --sele1, --sele2, --sele3 are specified or --molname, --begin, --end are specified).  */ | 
| 984 | if (local_args_info.scd_given) | 
| 985 | { | 
| 986 | fprintf (stderr, "%s: `--scd' (`-s') option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); | 
| 987 | goto failure; | 
| 988 | } | 
| 989 | if (args_info->scd_given && ! override) | 
| 990 | continue; | 
| 991 | local_args_info.scd_given = 1; | 
| 992 | args_info->scd_given = 1; | 
| 993 | if (args_info->staticProps_group_counter && override) | 
| 994 | reset_group_staticProps (args_info); | 
| 995 | args_info->staticProps_group_counter += 1; | 
| 996 | break; | 
| 997 |  | 
| 998 | case 'd':       /* density plot.  */ | 
| 999 | if (local_args_info.density_given) | 
| 1000 | { | 
| 1001 | fprintf (stderr, "%s: `--density' (`-d') option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); | 
| 1002 | goto failure; | 
| 1003 | } | 
| 1004 | if (args_info->density_given && ! override) | 
| 1005 | continue; | 
| 1006 | local_args_info.density_given = 1; | 
| 1007 | args_info->density_given = 1; | 
| 1008 | if (args_info->staticProps_group_counter && override) | 
| 1009 | reset_group_staticProps (args_info); | 
| 1010 | args_info->staticProps_group_counter += 1; | 
| 1011 | break; | 
| 1012 |  | 
| 1013 |  | 
| 1014 | case 0: /* Long option with no short option */ | 
| 1015 | /* maximum length (Defaults to 1/2 smallest length of first frame).  */ | 
| 1016 | if (strcmp (long_options[option_index].name, "length") == 0) | 
| 1017 | { | 
| 1018 | if (local_args_info.length_given) | 
| 1019 | { | 
| 1020 | fprintf (stderr, "%s: `--length' option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); | 
| 1021 | goto failure; | 
| 1022 | } | 
| 1023 | if (args_info->length_given && ! override) | 
| 1024 | continue; | 
| 1025 | local_args_info.length_given = 1; | 
| 1026 | args_info->length_given = 1; | 
| 1027 | args_info->length_arg = strtod (optarg, &stop_char); | 
| 1028 | if (!(stop_char && *stop_char == '\0')) { | 
| 1029 | fprintf(stderr, "%s: invalid numeric value: %s\n", argv[0], optarg); | 
| 1030 | goto failure; | 
| 1031 | } | 
| 1032 | if (args_info->length_orig) | 
| 1033 | free (args_info->length_orig); /* free previous string */ | 
| 1034 | args_info->length_orig = gengetopt_strdup (optarg); | 
| 1035 | } | 
| 1036 | /* select the first stuntdouble set.  */ | 
| 1037 | else if (strcmp (long_options[option_index].name, "sele1") == 0) | 
| 1038 | { | 
| 1039 | if (local_args_info.sele1_given) | 
| 1040 | { | 
| 1041 | fprintf (stderr, "%s: `--sele1' option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); | 
| 1042 | goto failure; | 
| 1043 | } | 
| 1044 | if (args_info->sele1_given && ! override) | 
| 1045 | continue; | 
| 1046 | local_args_info.sele1_given = 1; | 
| 1047 | args_info->sele1_given = 1; | 
| 1048 | if (args_info->sele1_arg) | 
| 1049 | free (args_info->sele1_arg); /* free previous string */ | 
| 1050 | args_info->sele1_arg = gengetopt_strdup (optarg); | 
| 1051 | if (args_info->sele1_orig) | 
| 1052 | free (args_info->sele1_orig); /* free previous string */ | 
| 1053 | args_info->sele1_orig = gengetopt_strdup (optarg); | 
| 1054 | } | 
| 1055 | /* select the second stuntdouble set.  */ | 
| 1056 | else if (strcmp (long_options[option_index].name, "sele2") == 0) | 
| 1057 | { | 
| 1058 | if (local_args_info.sele2_given) | 
| 1059 | { | 
| 1060 | fprintf (stderr, "%s: `--sele2' option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); | 
| 1061 | goto failure; | 
| 1062 | } | 
| 1063 | if (args_info->sele2_given && ! override) | 
| 1064 | continue; | 
| 1065 | local_args_info.sele2_given = 1; | 
| 1066 | args_info->sele2_given = 1; | 
| 1067 | if (args_info->sele2_arg) | 
| 1068 | free (args_info->sele2_arg); /* free previous string */ | 
| 1069 | args_info->sele2_arg = gengetopt_strdup (optarg); | 
| 1070 | if (args_info->sele2_orig) | 
| 1071 | free (args_info->sele2_orig); /* free previous string */ | 
| 1072 | args_info->sele2_orig = gengetopt_strdup (optarg); | 
| 1073 | } | 
| 1074 | /* select the third stuntdouble set.  */ | 
| 1075 | else if (strcmp (long_options[option_index].name, "sele3") == 0) | 
| 1076 | { | 
| 1077 | if (local_args_info.sele3_given) | 
| 1078 | { | 
| 1079 | fprintf (stderr, "%s: `--sele3' option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); | 
| 1080 | goto failure; | 
| 1081 | } | 
| 1082 | if (args_info->sele3_given && ! override) | 
| 1083 | continue; | 
| 1084 | local_args_info.sele3_given = 1; | 
| 1085 | args_info->sele3_given = 1; | 
| 1086 | if (args_info->sele3_arg) | 
| 1087 | free (args_info->sele3_arg); /* free previous string */ | 
| 1088 | args_info->sele3_arg = gengetopt_strdup (optarg); | 
| 1089 | if (args_info->sele3_orig) | 
| 1090 | free (args_info->sele3_orig); /* free previous string */ | 
| 1091 | args_info->sele3_orig = gengetopt_strdup (optarg); | 
| 1092 | } | 
| 1093 | /* select reference (use and only use with --gxyz).  */ | 
| 1094 | else if (strcmp (long_options[option_index].name, "refsele") == 0) | 
| 1095 | { | 
| 1096 | if (local_args_info.refsele_given) | 
| 1097 | { | 
| 1098 | fprintf (stderr, "%s: `--refsele' option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); | 
| 1099 | goto failure; | 
| 1100 | } | 
| 1101 | if (args_info->refsele_given && ! override) | 
| 1102 | continue; | 
| 1103 | local_args_info.refsele_given = 1; | 
| 1104 | args_info->refsele_given = 1; | 
| 1105 | if (args_info->refsele_arg) | 
| 1106 | free (args_info->refsele_arg); /* free previous string */ | 
| 1107 | args_info->refsele_arg = gengetopt_strdup (optarg); | 
| 1108 | if (args_info->refsele_orig) | 
| 1109 | free (args_info->refsele_orig); /* free previous string */ | 
| 1110 | args_info->refsele_orig = gengetopt_strdup (optarg); | 
| 1111 | } | 
| 1112 | /* molecule name.  */ | 
| 1113 | else if (strcmp (long_options[option_index].name, "molname") == 0) | 
| 1114 | { | 
| 1115 | if (local_args_info.molname_given) | 
| 1116 | { | 
| 1117 | fprintf (stderr, "%s: `--molname' option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); | 
| 1118 | goto failure; | 
| 1119 | } | 
| 1120 | if (args_info->molname_given && ! override) | 
| 1121 | continue; | 
| 1122 | local_args_info.molname_given = 1; | 
| 1123 | args_info->molname_given = 1; | 
| 1124 | if (args_info->molname_arg) | 
| 1125 | free (args_info->molname_arg); /* free previous string */ | 
| 1126 | args_info->molname_arg = gengetopt_strdup (optarg); | 
| 1127 | if (args_info->molname_orig) | 
| 1128 | free (args_info->molname_orig); /* free previous string */ | 
| 1129 | args_info->molname_orig = gengetopt_strdup (optarg); | 
| 1130 | } | 
| 1131 | /* begin internal index.  */ | 
| 1132 | else if (strcmp (long_options[option_index].name, "begin") == 0) | 
| 1133 | { | 
| 1134 | if (local_args_info.begin_given) | 
| 1135 | { | 
| 1136 | fprintf (stderr, "%s: `--begin' option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); | 
| 1137 | goto failure; | 
| 1138 | } | 
| 1139 | if (args_info->begin_given && ! override) | 
| 1140 | continue; | 
| 1141 | local_args_info.begin_given = 1; | 
| 1142 | args_info->begin_given = 1; | 
| 1143 | args_info->begin_arg = strtol (optarg, &stop_char, 0); | 
| 1144 | if (!(stop_char && *stop_char == '\0')) { | 
| 1145 | fprintf(stderr, "%s: invalid numeric value: %s\n", argv[0], optarg); | 
| 1146 | goto failure; | 
| 1147 | } | 
| 1148 | if (args_info->begin_orig) | 
| 1149 | free (args_info->begin_orig); /* free previous string */ | 
| 1150 | args_info->begin_orig = gengetopt_strdup (optarg); | 
| 1151 | } | 
| 1152 | /* end internal index.  */ | 
| 1153 | else if (strcmp (long_options[option_index].name, "end") == 0) | 
| 1154 | { | 
| 1155 | if (local_args_info.end_given) | 
| 1156 | { | 
| 1157 | fprintf (stderr, "%s: `--end' option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); | 
| 1158 | goto failure; | 
| 1159 | } | 
| 1160 | if (args_info->end_given && ! override) | 
| 1161 | continue; | 
| 1162 | local_args_info.end_given = 1; | 
| 1163 | args_info->end_given = 1; | 
| 1164 | args_info->end_arg = strtol (optarg, &stop_char, 0); | 
| 1165 | if (!(stop_char && *stop_char == '\0')) { | 
| 1166 | fprintf(stderr, "%s: invalid numeric value: %s\n", argv[0], optarg); | 
| 1167 | goto failure; | 
| 1168 | } | 
| 1169 | if (args_info->end_orig) | 
| 1170 | free (args_info->end_orig); /* free previous string */ | 
| 1171 | args_info->end_orig = gengetopt_strdup (optarg); | 
| 1172 | } | 
| 1173 | /* nanoparticle radius.  */ | 
| 1174 | else if (strcmp (long_options[option_index].name, "radius") == 0) | 
| 1175 | { | 
| 1176 | if (local_args_info.radius_given) | 
| 1177 | { | 
| 1178 | fprintf (stderr, "%s: `--radius' option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); | 
| 1179 | goto failure; | 
| 1180 | } | 
| 1181 | if (args_info->radius_given && ! override) | 
| 1182 | continue; | 
| 1183 | local_args_info.radius_given = 1; | 
| 1184 | args_info->radius_given = 1; | 
| 1185 | args_info->radius_arg = strtod (optarg, &stop_char); | 
| 1186 | if (!(stop_char && *stop_char == '\0')) { | 
| 1187 | fprintf(stderr, "%s: invalid numeric value: %s\n", argv[0], optarg); | 
| 1188 | goto failure; | 
| 1189 | } | 
| 1190 | if (args_info->radius_orig) | 
| 1191 | free (args_info->radius_orig); /* free previous string */ | 
| 1192 | args_info->radius_orig = gengetopt_strdup (optarg); | 
| 1193 | } | 
| 1194 | /* bond order parameter (--rcut must be specified).  */ | 
| 1195 | else if (strcmp (long_options[option_index].name, "bo") == 0) | 
| 1196 | { | 
| 1197 | if (local_args_info.bo_given) | 
| 1198 | { | 
| 1199 | fprintf (stderr, "%s: `--bo' option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); | 
| 1200 | goto failure; | 
| 1201 | } | 
| 1202 | if (args_info->bo_given && ! override) | 
| 1203 | continue; | 
| 1204 | local_args_info.bo_given = 1; | 
| 1205 | args_info->bo_given = 1; | 
| 1206 | if (args_info->staticProps_group_counter && override) | 
| 1207 | reset_group_staticProps (args_info); | 
| 1208 | args_info->staticProps_group_counter += 1; | 
| 1209 | break; | 
| 1210 | } | 
| 1211 | /* bond order parameter as a function of radius (--rcut must be specified).  */ | 
| 1212 | else if (strcmp (long_options[option_index].name, "bor") == 0) | 
| 1213 | { | 
| 1214 | if (local_args_info.bor_given) | 
| 1215 | { | 
| 1216 | fprintf (stderr, "%s: `--bor' option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); | 
| 1217 | goto failure; | 
| 1218 | } | 
| 1219 | if (args_info->bor_given && ! override) | 
| 1220 | continue; | 
| 1221 | local_args_info.bor_given = 1; | 
| 1222 | args_info->bor_given = 1; | 
| 1223 | if (args_info->staticProps_group_counter && override) | 
| 1224 | reset_group_staticProps (args_info); | 
| 1225 | args_info->staticProps_group_counter += 1; | 
| 1226 | break; | 
| 1227 | } | 
| 1228 | /* N(theta) bond angle density within (--rcut must be specified).  */ | 
| 1229 | else if (strcmp (long_options[option_index].name, "bad") == 0) | 
| 1230 | { | 
| 1231 | if (local_args_info.bad_given) | 
| 1232 | { | 
| 1233 | fprintf (stderr, "%s: `--bad' option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); | 
| 1234 | goto failure; | 
| 1235 | } | 
| 1236 | if (args_info->bad_given && ! override) | 
| 1237 | continue; | 
| 1238 | local_args_info.bad_given = 1; | 
| 1239 | args_info->bad_given = 1; | 
| 1240 | if (args_info->staticProps_group_counter && override) | 
| 1241 | reset_group_staticProps (args_info); | 
| 1242 | args_info->staticProps_group_counter += 1; | 
| 1243 | break; | 
| 1244 | } | 
| 1245 | /* g(r, cos(theta)).  */ | 
| 1246 | else if (strcmp (long_options[option_index].name, "r_theta") == 0) | 
| 1247 | { | 
| 1248 | if (local_args_info.r_theta_given) | 
| 1249 | { | 
| 1250 | fprintf (stderr, "%s: `--r_theta' option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); | 
| 1251 | goto failure; | 
| 1252 | } | 
| 1253 | if (args_info->r_theta_given && ! override) | 
| 1254 | continue; | 
| 1255 | local_args_info.r_theta_given = 1; | 
| 1256 | args_info->r_theta_given = 1; | 
| 1257 | if (args_info->staticProps_group_counter && override) | 
| 1258 | reset_group_staticProps (args_info); | 
| 1259 | args_info->staticProps_group_counter += 1; | 
| 1260 | break; | 
| 1261 | } | 
| 1262 | /* g(r, cos(omega)).  */ | 
| 1263 | else if (strcmp (long_options[option_index].name, "r_omega") == 0) | 
| 1264 | { | 
| 1265 | if (local_args_info.r_omega_given) | 
| 1266 | { | 
| 1267 | fprintf (stderr, "%s: `--r_omega' option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); | 
| 1268 | goto failure; | 
| 1269 | } | 
| 1270 | if (args_info->r_omega_given && ! override) | 
| 1271 | continue; | 
| 1272 | local_args_info.r_omega_given = 1; | 
| 1273 | args_info->r_omega_given = 1; | 
| 1274 | if (args_info->staticProps_group_counter && override) | 
| 1275 | reset_group_staticProps (args_info); | 
| 1276 | args_info->staticProps_group_counter += 1; | 
| 1277 | break; | 
| 1278 | } | 
| 1279 | /* g(cos(theta), cos(omega)).  */ | 
| 1280 | else if (strcmp (long_options[option_index].name, "theta_omega") == 0) | 
| 1281 | { | 
| 1282 | if (local_args_info.theta_omega_given) | 
| 1283 | { | 
| 1284 | fprintf (stderr, "%s: `--theta_omega' option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); | 
| 1285 | goto failure; | 
| 1286 | } | 
| 1287 | if (args_info->theta_omega_given && ! override) | 
| 1288 | continue; | 
| 1289 | local_args_info.theta_omega_given = 1; | 
| 1290 | args_info->theta_omega_given = 1; | 
| 1291 | if (args_info->staticProps_group_counter && override) | 
| 1292 | reset_group_staticProps (args_info); | 
| 1293 | args_info->staticProps_group_counter += 1; | 
| 1294 | break; | 
| 1295 | } | 
| 1296 | /* g(x, y, z).  */ | 
| 1297 | else if (strcmp (long_options[option_index].name, "gxyz") == 0) | 
| 1298 | { | 
| 1299 | if (local_args_info.gxyz_given) | 
| 1300 | { | 
| 1301 | fprintf (stderr, "%s: `--gxyz' option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); | 
| 1302 | goto failure; | 
| 1303 | } | 
| 1304 | if (args_info->gxyz_given && ! override) | 
| 1305 | continue; | 
| 1306 | local_args_info.gxyz_given = 1; | 
| 1307 | args_info->gxyz_given = 1; | 
| 1308 | if (args_info->staticProps_group_counter && override) | 
| 1309 | reset_group_staticProps (args_info); | 
| 1310 | args_info->staticProps_group_counter += 1; | 
| 1311 | break; | 
| 1312 | } | 
| 1313 | /* rp2 order parameter (--sele1 and --sele2 must be specified).  */ | 
| 1314 | else if (strcmp (long_options[option_index].name, "rp2") == 0) | 
| 1315 | { | 
| 1316 | if (local_args_info.rp2_given) | 
| 1317 | { | 
| 1318 | fprintf (stderr, "%s: `--rp2' option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); | 
| 1319 | goto failure; | 
| 1320 | } | 
| 1321 | if (args_info->rp2_given && ! override) | 
| 1322 | continue; | 
| 1323 | local_args_info.rp2_given = 1; | 
| 1324 | args_info->rp2_given = 1; | 
| 1325 | if (args_info->staticProps_group_counter && override) | 
| 1326 | reset_group_staticProps (args_info); | 
| 1327 | args_info->staticProps_group_counter += 1; | 
| 1328 | break; | 
| 1329 | } | 
| 1330 | /* slab density.  */ | 
| 1331 | else if (strcmp (long_options[option_index].name, "slab_density") == 0) | 
| 1332 | { | 
| 1333 | if (local_args_info.slab_density_given) | 
| 1334 | { | 
| 1335 | fprintf (stderr, "%s: `--slab_density' option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); | 
| 1336 | goto failure; | 
| 1337 | } | 
| 1338 | if (args_info->slab_density_given && ! override) | 
| 1339 | continue; | 
| 1340 | local_args_info.slab_density_given = 1; | 
| 1341 | args_info->slab_density_given = 1; | 
| 1342 | if (args_info->staticProps_group_counter && override) | 
| 1343 | reset_group_staticProps (args_info); | 
| 1344 | args_info->staticProps_group_counter += 1; | 
| 1345 | break; | 
| 1346 | } | 
| 1347 | /* hxy.  */ | 
| 1348 | else if (strcmp (long_options[option_index].name, "hxy") == 0) | 
| 1349 | { | 
| 1350 | if (local_args_info.hxy_given) | 
| 1351 | { | 
| 1352 | fprintf (stderr, "%s: `--hxy' option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); | 
| 1353 | goto failure; | 
| 1354 | } | 
| 1355 | if (args_info->hxy_given && ! override) | 
| 1356 | continue; | 
| 1357 | local_args_info.hxy_given = 1; | 
| 1358 | args_info->hxy_given = 1; | 
| 1359 | if (args_info->staticProps_group_counter && override) | 
| 1360 | reset_group_staticProps (args_info); | 
| 1361 | args_info->staticProps_group_counter += 1; | 
| 1362 | break; | 
| 1363 | } | 
| 1364 | /* rho of R.  */ | 
| 1365 | else if (strcmp (long_options[option_index].name, "rho_r") == 0) | 
| 1366 | { | 
| 1367 | if (local_args_info.rho_r_given) | 
| 1368 | { | 
| 1369 | fprintf (stderr, "%s: `--rho_r' option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); | 
| 1370 | goto failure; | 
| 1371 | } | 
| 1372 | if (args_info->rho_r_given && ! override) | 
| 1373 | continue; | 
| 1374 | local_args_info.rho_r_given = 1; | 
| 1375 | args_info->rho_r_given = 1; | 
| 1376 | if (args_info->staticProps_group_counter && override) | 
| 1377 | reset_group_staticProps (args_info); | 
| 1378 | args_info->staticProps_group_counter += 1; | 
| 1379 | break; | 
| 1380 | } | 
| 1381 | /* hull volume of nanoparticle.  */ | 
| 1382 | else if (strcmp (long_options[option_index].name, "hullvol") == 0) | 
| 1383 | { | 
| 1384 | if (local_args_info.hullvol_given) | 
| 1385 | { | 
| 1386 | fprintf (stderr, "%s: `--hullvol' option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); | 
| 1387 | goto failure; | 
| 1388 | } | 
| 1389 | if (args_info->hullvol_given && ! override) | 
| 1390 | continue; | 
| 1391 | local_args_info.hullvol_given = 1; | 
| 1392 | args_info->hullvol_given = 1; | 
| 1393 | if (args_info->staticProps_group_counter && override) | 
| 1394 | reset_group_staticProps (args_info); | 
| 1395 | args_info->staticProps_group_counter += 1; | 
| 1396 | break; | 
| 1397 | } | 
| 1398 |  | 
| 1399 | break; | 
| 1400 | case '?':       /* Invalid option.  */ | 
| 1401 | /* `getopt_long' already printed an error message.  */ | 
| 1402 | goto failure; | 
| 1403 |  | 
| 1404 | default:        /* bug: option not considered.  */ | 
| 1405 | fprintf (stderr, "%s: option unknown: %c%s\n", CMDLINE_PARSER_PACKAGE, c, (additional_error ? additional_error : "")); | 
| 1406 | abort (); | 
| 1407 | } /* switch */ | 
| 1408 | } /* while */ | 
| 1409 |  | 
| 1410 | if (args_info->staticProps_group_counter > 1) | 
| 1411 | { | 
| 1412 | fprintf (stderr, "%s: %d options of group staticProps were given. One is required.%s\n", argv[0], args_info->staticProps_group_counter, (additional_error ? additional_error : "")); | 
| 1413 | error = 1; | 
| 1414 | } | 
| 1415 |  | 
| 1416 |  | 
| 1417 |  | 
| 1418 | if (check_required) | 
| 1419 | { | 
| 1420 | error += cmdline_parser_required2 (args_info, argv[0], additional_error); | 
| 1421 | } | 
| 1422 |  | 
| 1423 | cmdline_parser_release (&local_args_info); | 
| 1424 |  | 
| 1425 | if ( error ) | 
| 1426 | return (EXIT_FAILURE); | 
| 1427 |  | 
| 1428 | if (optind < argc) | 
| 1429 | { | 
| 1430 | int i = 0 ; | 
| 1431 | int found_prog_name = 0; | 
| 1432 | /* whether program name, i.e., argv[0], is in the remaining args | 
| 1433 | (this may happen with some implementations of getopt, | 
| 1434 | but surely not with the one included by gengetopt) */ | 
| 1435 |  | 
| 1436 | i = optind; | 
| 1437 | while (i < argc) | 
| 1438 | if (argv[i++] == argv[0]) { | 
| 1439 | found_prog_name = 1; | 
| 1440 | break; | 
| 1441 | } | 
| 1442 | i = 0; | 
| 1443 |  | 
| 1444 | args_info->inputs_num = argc - optind - found_prog_name; | 
| 1445 | args_info->inputs = | 
| 1446 | (char **)(malloc ((args_info->inputs_num)*sizeof(char *))) ; | 
| 1447 | while (optind < argc) | 
| 1448 | if (argv[optind++] != argv[0]) | 
| 1449 | args_info->inputs[ i++ ] = gengetopt_strdup (argv[optind-1]) ; | 
| 1450 | } | 
| 1451 |  | 
| 1452 | return 0; | 
| 1453 |  | 
| 1454 | failure: | 
| 1455 |  | 
| 1456 | cmdline_parser_release (&local_args_info); | 
| 1457 | return (EXIT_FAILURE); | 
| 1458 | } |