# | Line 1 | Line 1 | |
---|---|---|
1 | /* | |
2 | < | File autogenerated by gengetopt version 2.11 |
2 | > | File autogenerated by gengetopt version 2.19.1 |
3 | generated with the following command: | |
4 | < | /home/maul/gezelter/tim/bin/gengetopt -i StaticProps.ggo -F StaticPropsCmd |
4 | > | gengetopt -i StaticProps.ggo -F StaticPropsCmd -u |
5 | ||
6 | The developers of gengetopt consider the fixed text that goes in all | |
7 | gengetopt output files to be in the public domain: | |
8 | we make no copyright claims on it. | |
9 | */ | |
10 | ||
11 | – | |
12 | – | #include <stdio.h> |
13 | – | #include <stdlib.h> |
14 | – | #include <string.h> |
15 | – | |
11 | /* If we use autoconf. */ | |
12 | #ifdef HAVE_CONFIG_H | |
13 | #include "config.h" | |
14 | #endif | |
15 | ||
16 | + | #include <stdio.h> |
17 | + | #include <stdlib.h> |
18 | + | #include <string.h> |
19 | + | |
20 | #include "getopt.h" | |
21 | ||
22 | #include "StaticPropsCmd.h" | |
23 | ||
24 | + | const char *gengetopt_args_info_purpose = ""; |
25 | + | |
26 | + | const char *gengetopt_args_info_usage = "Usage: StaticProps [OPTIONS]... [FILES]..."; |
27 | + | |
28 | + | const char *gengetopt_args_info_description = ""; |
29 | + | |
30 | + | const char *gengetopt_args_info_help[] = { |
31 | + | " -h, --help Print help and exit", |
32 | + | " -V, --version Print version and exit", |
33 | + | " -i, --input=filename input dump file", |
34 | + | " -o, --output=filename output file name", |
35 | + | " -n, --step=INT process every n frame (default=`1')", |
36 | + | " -b, --nbins=INT number of bins (general purpose) \n (default=`100')", |
37 | + | " -x, --nbins_x=INT number of bins in x axis (default=`100')", |
38 | + | " -y, --nbins_y=INT number of bins in y axis (default=`100')", |
39 | + | " -a, --nanglebins=INT number of bins for cos(angle) (default=`50')", |
40 | + | " --length=DOUBLE maximum length (Defaults to 1/2 smallest length \n of first frame)", |
41 | + | " -c, --rcut=DOUBLE cutoff radius (rcut)", |
42 | + | " -z, --zoffset=DOUBLE Where to set the zero for the slab_density \n calculation (default=`0')", |
43 | + | " --sele1=selection script select the first stuntdouble set", |
44 | + | " --sele2=selection script select the second stuntdouble set", |
45 | + | " --sele3=selection script select the third stuntdouble set", |
46 | + | " --refsele=selection script\n select reference (use and only use with --gxyz)", |
47 | + | " --molname=STRING molecule name", |
48 | + | " --begin=INT begin internal index", |
49 | + | " --end=INT end internal index", |
50 | + | " --radius=DOUBLE nanoparticle radius", |
51 | + | "\n Group: staticProps\n an option of this group is required", |
52 | + | " --bo bond order parameter (--rcut must be specified)", |
53 | + | " --bor bond order parameter as a function of radius \n (--rcut must be specified)", |
54 | + | " -g, --gofr g(r)", |
55 | + | " --r_theta g(r, cos(theta))", |
56 | + | " --r_omega g(r, cos(omega))", |
57 | + | " --theta_omega g(cos(theta), cos(omega))", |
58 | + | " --gxyz g(x, y, z)", |
59 | + | " -p, --p2 p2 order parameter (--sele1 and --sele2 must be \n specified)", |
60 | + | " --rp2 rp2 order parameter (--sele1 and --sele2 must \n be specified)", |
61 | + | " -s, --scd scd order parameter (either --sele1, --sele2, \n --sele3 are specified or --molname, --begin, \n --end are specified)", |
62 | + | " -d, --density density plot", |
63 | + | " --slab_density slab density", |
64 | + | " --hxy hxy", |
65 | + | " --rho_r rho of R", |
66 | + | 0 |
67 | + | }; |
68 | + | |
69 | + | static |
70 | + | void clear_given (struct gengetopt_args_info *args_info); |
71 | + | static |
72 | + | void clear_args (struct gengetopt_args_info *args_info); |
73 | + | |
74 | + | static int |
75 | + | cmdline_parser_internal (int argc, char * const *argv, struct gengetopt_args_info *args_info, int override, int initialize, int check_required, const char *additional_error); |
76 | + | |
77 | + | static int |
78 | + | cmdline_parser_required2 (struct gengetopt_args_info *args_info, const char *prog_name, const char *additional_error); |
79 | + | |
80 | + | static char * |
81 | + | gengetopt_strdup (const char *s); |
82 | + | |
83 | + | static |
84 | + | void clear_given (struct gengetopt_args_info *args_info) |
85 | + | { |
86 | + | args_info->help_given = 0 ; |
87 | + | args_info->version_given = 0 ; |
88 | + | args_info->input_given = 0 ; |
89 | + | args_info->output_given = 0 ; |
90 | + | args_info->step_given = 0 ; |
91 | + | args_info->nbins_given = 0 ; |
92 | + | args_info->nbins_x_given = 0 ; |
93 | + | args_info->nbins_y_given = 0 ; |
94 | + | args_info->nanglebins_given = 0 ; |
95 | + | args_info->length_given = 0 ; |
96 | + | args_info->rcut_given = 0 ; |
97 | + | args_info->zoffset_given = 0 ; |
98 | + | args_info->sele1_given = 0 ; |
99 | + | args_info->sele2_given = 0 ; |
100 | + | args_info->sele3_given = 0 ; |
101 | + | args_info->refsele_given = 0 ; |
102 | + | args_info->molname_given = 0 ; |
103 | + | args_info->begin_given = 0 ; |
104 | + | args_info->end_given = 0 ; |
105 | + | args_info->radius_given = 0 ; |
106 | + | args_info->bo_given = 0 ; |
107 | + | args_info->bor_given = 0 ; |
108 | + | args_info->gofr_given = 0 ; |
109 | + | args_info->r_theta_given = 0 ; |
110 | + | args_info->r_omega_given = 0 ; |
111 | + | args_info->theta_omega_given = 0 ; |
112 | + | args_info->gxyz_given = 0 ; |
113 | + | args_info->p2_given = 0 ; |
114 | + | args_info->rp2_given = 0 ; |
115 | + | args_info->scd_given = 0 ; |
116 | + | args_info->density_given = 0 ; |
117 | + | args_info->slab_density_given = 0 ; |
118 | + | args_info->hxy_given = 0 ; |
119 | + | args_info->rho_r_given = 0 ; |
120 | + | args_info->staticProps_group_counter = 0 ; |
121 | + | } |
122 | + | |
123 | + | static |
124 | + | void clear_args (struct gengetopt_args_info *args_info) |
125 | + | { |
126 | + | args_info->input_arg = NULL; |
127 | + | args_info->input_orig = NULL; |
128 | + | args_info->output_arg = NULL; |
129 | + | args_info->output_orig = NULL; |
130 | + | args_info->step_arg = 1; |
131 | + | args_info->step_orig = NULL; |
132 | + | args_info->nbins_arg = 100; |
133 | + | args_info->nbins_orig = NULL; |
134 | + | args_info->nbins_x_arg = 100; |
135 | + | args_info->nbins_x_orig = NULL; |
136 | + | args_info->nbins_y_arg = 100; |
137 | + | args_info->nbins_y_orig = NULL; |
138 | + | args_info->nanglebins_arg = 50; |
139 | + | args_info->nanglebins_orig = NULL; |
140 | + | args_info->length_orig = NULL; |
141 | + | args_info->rcut_orig = NULL; |
142 | + | args_info->zoffset_arg = 0; |
143 | + | args_info->zoffset_orig = NULL; |
144 | + | args_info->sele1_arg = NULL; |
145 | + | args_info->sele1_orig = NULL; |
146 | + | args_info->sele2_arg = NULL; |
147 | + | args_info->sele2_orig = NULL; |
148 | + | args_info->sele3_arg = NULL; |
149 | + | args_info->sele3_orig = NULL; |
150 | + | args_info->refsele_arg = NULL; |
151 | + | args_info->refsele_orig = NULL; |
152 | + | args_info->molname_arg = NULL; |
153 | + | args_info->molname_orig = NULL; |
154 | + | args_info->begin_orig = NULL; |
155 | + | args_info->end_orig = NULL; |
156 | + | args_info->radius_orig = NULL; |
157 | + | |
158 | + | } |
159 | + | |
160 | + | static |
161 | + | void init_args_info(struct gengetopt_args_info *args_info) |
162 | + | { |
163 | + | args_info->help_help = gengetopt_args_info_help[0] ; |
164 | + | args_info->version_help = gengetopt_args_info_help[1] ; |
165 | + | args_info->input_help = gengetopt_args_info_help[2] ; |
166 | + | args_info->output_help = gengetopt_args_info_help[3] ; |
167 | + | args_info->step_help = gengetopt_args_info_help[4] ; |
168 | + | args_info->nbins_help = gengetopt_args_info_help[5] ; |
169 | + | args_info->nbins_x_help = gengetopt_args_info_help[6] ; |
170 | + | args_info->nbins_y_help = gengetopt_args_info_help[7] ; |
171 | + | args_info->nanglebins_help = gengetopt_args_info_help[8] ; |
172 | + | args_info->length_help = gengetopt_args_info_help[9] ; |
173 | + | args_info->rcut_help = gengetopt_args_info_help[10] ; |
174 | + | args_info->zoffset_help = gengetopt_args_info_help[11] ; |
175 | + | args_info->sele1_help = gengetopt_args_info_help[12] ; |
176 | + | args_info->sele2_help = gengetopt_args_info_help[13] ; |
177 | + | args_info->sele3_help = gengetopt_args_info_help[14] ; |
178 | + | args_info->refsele_help = gengetopt_args_info_help[15] ; |
179 | + | args_info->molname_help = gengetopt_args_info_help[16] ; |
180 | + | args_info->begin_help = gengetopt_args_info_help[17] ; |
181 | + | args_info->end_help = gengetopt_args_info_help[18] ; |
182 | + | args_info->radius_help = gengetopt_args_info_help[19] ; |
183 | + | args_info->bo_help = gengetopt_args_info_help[20] ; |
184 | + | args_info->bor_help = gengetopt_args_info_help[21] ; |
185 | + | args_info->gofr_help = gengetopt_args_info_help[22] ; |
186 | + | args_info->r_theta_help = gengetopt_args_info_help[23] ; |
187 | + | args_info->r_omega_help = gengetopt_args_info_help[24] ; |
188 | + | args_info->theta_omega_help = gengetopt_args_info_help[25] ; |
189 | + | args_info->gxyz_help = gengetopt_args_info_help[26] ; |
190 | + | args_info->p2_help = gengetopt_args_info_help[27] ; |
191 | + | args_info->rp2_help = gengetopt_args_info_help[28] ; |
192 | + | args_info->scd_help = gengetopt_args_info_help[29] ; |
193 | + | args_info->density_help = gengetopt_args_info_help[30] ; |
194 | + | args_info->slab_density_help = gengetopt_args_info_help[31] ; |
195 | + | args_info->hxy_help = gengetopt_args_info_help[32] ; |
196 | + | args_info->rho_r_help = gengetopt_args_info_help[33] ; |
197 | + | |
198 | + | } |
199 | + | |
200 | void | |
201 | cmdline_parser_print_version (void) | |
202 | { | |
# | Line 31 | Line 206 | cmdline_parser_print_help (void) | |
206 | void | |
207 | cmdline_parser_print_help (void) | |
208 | { | |
209 | + | int i = 0; |
210 | cmdline_parser_print_version (); | |
211 | < | printf("\n" |
212 | < | "Usage: %s [OPTIONS]...\n", CMDLINE_PARSER_PACKAGE); |
213 | < | printf("\n"); |
214 | < | printf(" -h, --help Print help and exit\n"); |
215 | < | printf(" -V, --version Print version and exit\n"); |
216 | < | printf(" -i, --input=filename input dump file\n"); |
217 | < | printf(" -o, --output=filename output file name\n"); |
218 | < | printf(" -n, --step=INT process every n frame (default=`1')\n"); |
219 | < | printf(" -r, --nrbins=INT number of bins for distance (default=`100')\n"); |
220 | < | printf(" -a, --nanglebins=INT number of bins for cos(angle) (default=\n `50')\n"); |
221 | < | printf(" -l, --length=DOUBLE maximum length (Defaults to 1/2 smallest \n length of first frame)\n"); |
46 | < | printf(" --sele1=selection script select first stuntdouble set\n"); |
47 | < | printf(" --sele2=selection script select second stuntdouble set\n"); |
48 | < | printf(" --refsele=selection script select reference (use and only use with \n --gxyz)\n"); |
49 | < | printf("\n"); |
50 | < | printf(" Group: staticProps an option of this group is required\n"); |
51 | < | printf(" --gofr g(r)\n"); |
52 | < | printf(" --r_theta g(r, cos(theta))\n"); |
53 | < | printf(" --r_omega g(r, cos(omega))\n"); |
54 | < | printf(" --theta_omega g(cos(theta), cos(omega))\n"); |
55 | < | printf(" --gxyz g(x, y, z)\n"); |
56 | < | printf(" --p2 p2 order parameter\n"); |
211 | > | |
212 | > | if (strlen(gengetopt_args_info_purpose) > 0) |
213 | > | printf("\n%s\n", gengetopt_args_info_purpose); |
214 | > | |
215 | > | printf("\n%s\n\n", gengetopt_args_info_usage); |
216 | > | |
217 | > | if (strlen(gengetopt_args_info_description) > 0) |
218 | > | printf("%s\n", gengetopt_args_info_description); |
219 | > | |
220 | > | while (gengetopt_args_info_help[i]) |
221 | > | printf("%s\n", gengetopt_args_info_help[i++]); |
222 | } | |
223 | ||
224 | + | void |
225 | + | cmdline_parser_init (struct gengetopt_args_info *args_info) |
226 | + | { |
227 | + | clear_given (args_info); |
228 | + | clear_args (args_info); |
229 | + | init_args_info (args_info); |
230 | ||
231 | < | static char *gengetopt_strdup (const char *s); |
231 | > | args_info->inputs = NULL; |
232 | > | args_info->inputs_num = 0; |
233 | > | } |
234 | > | |
235 | > | static void |
236 | > | cmdline_parser_release (struct gengetopt_args_info *args_info) |
237 | > | { |
238 | > | |
239 | > | unsigned int i; |
240 | > | if (args_info->input_arg) |
241 | > | { |
242 | > | free (args_info->input_arg); /* free previous argument */ |
243 | > | args_info->input_arg = 0; |
244 | > | } |
245 | > | if (args_info->input_orig) |
246 | > | { |
247 | > | free (args_info->input_orig); /* free previous argument */ |
248 | > | args_info->input_orig = 0; |
249 | > | } |
250 | > | if (args_info->output_arg) |
251 | > | { |
252 | > | free (args_info->output_arg); /* free previous argument */ |
253 | > | args_info->output_arg = 0; |
254 | > | } |
255 | > | if (args_info->output_orig) |
256 | > | { |
257 | > | free (args_info->output_orig); /* free previous argument */ |
258 | > | args_info->output_orig = 0; |
259 | > | } |
260 | > | if (args_info->step_orig) |
261 | > | { |
262 | > | free (args_info->step_orig); /* free previous argument */ |
263 | > | args_info->step_orig = 0; |
264 | > | } |
265 | > | if (args_info->nbins_orig) |
266 | > | { |
267 | > | free (args_info->nbins_orig); /* free previous argument */ |
268 | > | args_info->nbins_orig = 0; |
269 | > | } |
270 | > | if (args_info->nbins_x_orig) |
271 | > | { |
272 | > | free (args_info->nbins_x_orig); /* free previous argument */ |
273 | > | args_info->nbins_x_orig = 0; |
274 | > | } |
275 | > | if (args_info->nbins_y_orig) |
276 | > | { |
277 | > | free (args_info->nbins_y_orig); /* free previous argument */ |
278 | > | args_info->nbins_y_orig = 0; |
279 | > | } |
280 | > | if (args_info->nanglebins_orig) |
281 | > | { |
282 | > | free (args_info->nanglebins_orig); /* free previous argument */ |
283 | > | args_info->nanglebins_orig = 0; |
284 | > | } |
285 | > | if (args_info->length_orig) |
286 | > | { |
287 | > | free (args_info->length_orig); /* free previous argument */ |
288 | > | args_info->length_orig = 0; |
289 | > | } |
290 | > | if (args_info->rcut_orig) |
291 | > | { |
292 | > | free (args_info->rcut_orig); /* free previous argument */ |
293 | > | args_info->rcut_orig = 0; |
294 | > | } |
295 | > | if (args_info->zoffset_orig) |
296 | > | { |
297 | > | free (args_info->zoffset_orig); /* free previous argument */ |
298 | > | args_info->zoffset_orig = 0; |
299 | > | } |
300 | > | if (args_info->sele1_arg) |
301 | > | { |
302 | > | free (args_info->sele1_arg); /* free previous argument */ |
303 | > | args_info->sele1_arg = 0; |
304 | > | } |
305 | > | if (args_info->sele1_orig) |
306 | > | { |
307 | > | free (args_info->sele1_orig); /* free previous argument */ |
308 | > | args_info->sele1_orig = 0; |
309 | > | } |
310 | > | if (args_info->sele2_arg) |
311 | > | { |
312 | > | free (args_info->sele2_arg); /* free previous argument */ |
313 | > | args_info->sele2_arg = 0; |
314 | > | } |
315 | > | if (args_info->sele2_orig) |
316 | > | { |
317 | > | free (args_info->sele2_orig); /* free previous argument */ |
318 | > | args_info->sele2_orig = 0; |
319 | > | } |
320 | > | if (args_info->sele3_arg) |
321 | > | { |
322 | > | free (args_info->sele3_arg); /* free previous argument */ |
323 | > | args_info->sele3_arg = 0; |
324 | > | } |
325 | > | if (args_info->sele3_orig) |
326 | > | { |
327 | > | free (args_info->sele3_orig); /* free previous argument */ |
328 | > | args_info->sele3_orig = 0; |
329 | > | } |
330 | > | if (args_info->refsele_arg) |
331 | > | { |
332 | > | free (args_info->refsele_arg); /* free previous argument */ |
333 | > | args_info->refsele_arg = 0; |
334 | > | } |
335 | > | if (args_info->refsele_orig) |
336 | > | { |
337 | > | free (args_info->refsele_orig); /* free previous argument */ |
338 | > | args_info->refsele_orig = 0; |
339 | > | } |
340 | > | if (args_info->molname_arg) |
341 | > | { |
342 | > | free (args_info->molname_arg); /* free previous argument */ |
343 | > | args_info->molname_arg = 0; |
344 | > | } |
345 | > | if (args_info->molname_orig) |
346 | > | { |
347 | > | free (args_info->molname_orig); /* free previous argument */ |
348 | > | args_info->molname_orig = 0; |
349 | > | } |
350 | > | if (args_info->begin_orig) |
351 | > | { |
352 | > | free (args_info->begin_orig); /* free previous argument */ |
353 | > | args_info->begin_orig = 0; |
354 | > | } |
355 | > | if (args_info->end_orig) |
356 | > | { |
357 | > | free (args_info->end_orig); /* free previous argument */ |
358 | > | args_info->end_orig = 0; |
359 | > | } |
360 | > | if (args_info->radius_orig) |
361 | > | { |
362 | > | free (args_info->radius_orig); /* free previous argument */ |
363 | > | args_info->radius_orig = 0; |
364 | > | } |
365 | > | |
366 | > | for (i = 0; i < args_info->inputs_num; ++i) |
367 | > | free (args_info->inputs [i]); |
368 | > | |
369 | > | if (args_info->inputs_num) |
370 | > | free (args_info->inputs); |
371 | > | |
372 | > | clear_given (args_info); |
373 | > | } |
374 | > | |
375 | > | int |
376 | > | cmdline_parser_file_save(const char *filename, struct gengetopt_args_info *args_info) |
377 | > | { |
378 | > | FILE *outfile; |
379 | > | int i = 0; |
380 | > | |
381 | > | outfile = fopen(filename, "w"); |
382 | > | |
383 | > | if (!outfile) |
384 | > | { |
385 | > | fprintf (stderr, "%s: cannot open file for writing: %s\n", CMDLINE_PARSER_PACKAGE, filename); |
386 | > | return EXIT_FAILURE; |
387 | > | } |
388 | ||
389 | + | if (args_info->help_given) { |
390 | + | fprintf(outfile, "%s\n", "help"); |
391 | + | } |
392 | + | if (args_info->version_given) { |
393 | + | fprintf(outfile, "%s\n", "version"); |
394 | + | } |
395 | + | if (args_info->input_given) { |
396 | + | if (args_info->input_orig) { |
397 | + | fprintf(outfile, "%s=\"%s\"\n", "input", args_info->input_orig); |
398 | + | } else { |
399 | + | fprintf(outfile, "%s\n", "input"); |
400 | + | } |
401 | + | } |
402 | + | if (args_info->output_given) { |
403 | + | if (args_info->output_orig) { |
404 | + | fprintf(outfile, "%s=\"%s\"\n", "output", args_info->output_orig); |
405 | + | } else { |
406 | + | fprintf(outfile, "%s\n", "output"); |
407 | + | } |
408 | + | } |
409 | + | if (args_info->step_given) { |
410 | + | if (args_info->step_orig) { |
411 | + | fprintf(outfile, "%s=\"%s\"\n", "step", args_info->step_orig); |
412 | + | } else { |
413 | + | fprintf(outfile, "%s\n", "step"); |
414 | + | } |
415 | + | } |
416 | + | if (args_info->nbins_given) { |
417 | + | if (args_info->nbins_orig) { |
418 | + | fprintf(outfile, "%s=\"%s\"\n", "nbins", args_info->nbins_orig); |
419 | + | } else { |
420 | + | fprintf(outfile, "%s\n", "nbins"); |
421 | + | } |
422 | + | } |
423 | + | if (args_info->nbins_x_given) { |
424 | + | if (args_info->nbins_x_orig) { |
425 | + | fprintf(outfile, "%s=\"%s\"\n", "nbins_x", args_info->nbins_x_orig); |
426 | + | } else { |
427 | + | fprintf(outfile, "%s\n", "nbins_x"); |
428 | + | } |
429 | + | } |
430 | + | if (args_info->nbins_y_given) { |
431 | + | if (args_info->nbins_y_orig) { |
432 | + | fprintf(outfile, "%s=\"%s\"\n", "nbins_y", args_info->nbins_y_orig); |
433 | + | } else { |
434 | + | fprintf(outfile, "%s\n", "nbins_y"); |
435 | + | } |
436 | + | } |
437 | + | if (args_info->nanglebins_given) { |
438 | + | if (args_info->nanglebins_orig) { |
439 | + | fprintf(outfile, "%s=\"%s\"\n", "nanglebins", args_info->nanglebins_orig); |
440 | + | } else { |
441 | + | fprintf(outfile, "%s\n", "nanglebins"); |
442 | + | } |
443 | + | } |
444 | + | if (args_info->length_given) { |
445 | + | if (args_info->length_orig) { |
446 | + | fprintf(outfile, "%s=\"%s\"\n", "length", args_info->length_orig); |
447 | + | } else { |
448 | + | fprintf(outfile, "%s\n", "length"); |
449 | + | } |
450 | + | } |
451 | + | if (args_info->rcut_given) { |
452 | + | if (args_info->rcut_orig) { |
453 | + | fprintf(outfile, "%s=\"%s\"\n", "rcut", args_info->rcut_orig); |
454 | + | } else { |
455 | + | fprintf(outfile, "%s\n", "rcut"); |
456 | + | } |
457 | + | } |
458 | + | if (args_info->zoffset_given) { |
459 | + | if (args_info->zoffset_orig) { |
460 | + | fprintf(outfile, "%s=\"%s\"\n", "zoffset", args_info->zoffset_orig); |
461 | + | } else { |
462 | + | fprintf(outfile, "%s\n", "zoffset"); |
463 | + | } |
464 | + | } |
465 | + | if (args_info->sele1_given) { |
466 | + | if (args_info->sele1_orig) { |
467 | + | fprintf(outfile, "%s=\"%s\"\n", "sele1", args_info->sele1_orig); |
468 | + | } else { |
469 | + | fprintf(outfile, "%s\n", "sele1"); |
470 | + | } |
471 | + | } |
472 | + | if (args_info->sele2_given) { |
473 | + | if (args_info->sele2_orig) { |
474 | + | fprintf(outfile, "%s=\"%s\"\n", "sele2", args_info->sele2_orig); |
475 | + | } else { |
476 | + | fprintf(outfile, "%s\n", "sele2"); |
477 | + | } |
478 | + | } |
479 | + | if (args_info->sele3_given) { |
480 | + | if (args_info->sele3_orig) { |
481 | + | fprintf(outfile, "%s=\"%s\"\n", "sele3", args_info->sele3_orig); |
482 | + | } else { |
483 | + | fprintf(outfile, "%s\n", "sele3"); |
484 | + | } |
485 | + | } |
486 | + | if (args_info->refsele_given) { |
487 | + | if (args_info->refsele_orig) { |
488 | + | fprintf(outfile, "%s=\"%s\"\n", "refsele", args_info->refsele_orig); |
489 | + | } else { |
490 | + | fprintf(outfile, "%s\n", "refsele"); |
491 | + | } |
492 | + | } |
493 | + | if (args_info->molname_given) { |
494 | + | if (args_info->molname_orig) { |
495 | + | fprintf(outfile, "%s=\"%s\"\n", "molname", args_info->molname_orig); |
496 | + | } else { |
497 | + | fprintf(outfile, "%s\n", "molname"); |
498 | + | } |
499 | + | } |
500 | + | if (args_info->begin_given) { |
501 | + | if (args_info->begin_orig) { |
502 | + | fprintf(outfile, "%s=\"%s\"\n", "begin", args_info->begin_orig); |
503 | + | } else { |
504 | + | fprintf(outfile, "%s\n", "begin"); |
505 | + | } |
506 | + | } |
507 | + | if (args_info->end_given) { |
508 | + | if (args_info->end_orig) { |
509 | + | fprintf(outfile, "%s=\"%s\"\n", "end", args_info->end_orig); |
510 | + | } else { |
511 | + | fprintf(outfile, "%s\n", "end"); |
512 | + | } |
513 | + | } |
514 | + | if (args_info->radius_given) { |
515 | + | if (args_info->radius_orig) { |
516 | + | fprintf(outfile, "%s=\"%s\"\n", "radius", args_info->radius_orig); |
517 | + | } else { |
518 | + | fprintf(outfile, "%s\n", "radius"); |
519 | + | } |
520 | + | } |
521 | + | if (args_info->bo_given) { |
522 | + | fprintf(outfile, "%s\n", "bo"); |
523 | + | } |
524 | + | if (args_info->bor_given) { |
525 | + | fprintf(outfile, "%s\n", "bor"); |
526 | + | } |
527 | + | if (args_info->gofr_given) { |
528 | + | fprintf(outfile, "%s\n", "gofr"); |
529 | + | } |
530 | + | if (args_info->r_theta_given) { |
531 | + | fprintf(outfile, "%s\n", "r_theta"); |
532 | + | } |
533 | + | if (args_info->r_omega_given) { |
534 | + | fprintf(outfile, "%s\n", "r_omega"); |
535 | + | } |
536 | + | if (args_info->theta_omega_given) { |
537 | + | fprintf(outfile, "%s\n", "theta_omega"); |
538 | + | } |
539 | + | if (args_info->gxyz_given) { |
540 | + | fprintf(outfile, "%s\n", "gxyz"); |
541 | + | } |
542 | + | if (args_info->p2_given) { |
543 | + | fprintf(outfile, "%s\n", "p2"); |
544 | + | } |
545 | + | if (args_info->rp2_given) { |
546 | + | fprintf(outfile, "%s\n", "rp2"); |
547 | + | } |
548 | + | if (args_info->scd_given) { |
549 | + | fprintf(outfile, "%s\n", "scd"); |
550 | + | } |
551 | + | if (args_info->density_given) { |
552 | + | fprintf(outfile, "%s\n", "density"); |
553 | + | } |
554 | + | if (args_info->slab_density_given) { |
555 | + | fprintf(outfile, "%s\n", "slab_density"); |
556 | + | } |
557 | + | if (args_info->hxy_given) { |
558 | + | fprintf(outfile, "%s\n", "hxy"); |
559 | + | } |
560 | + | if (args_info->rho_r_given) { |
561 | + | fprintf(outfile, "%s\n", "rho_r"); |
562 | + | } |
563 | + | |
564 | + | fclose (outfile); |
565 | + | |
566 | + | i = EXIT_SUCCESS; |
567 | + | return i; |
568 | + | } |
569 | + | |
570 | + | void |
571 | + | cmdline_parser_free (struct gengetopt_args_info *args_info) |
572 | + | { |
573 | + | cmdline_parser_release (args_info); |
574 | + | } |
575 | + | |
576 | + | |
577 | /* gengetopt_strdup() */ | |
578 | /* strdup.c replacement of strdup, which is not standard */ | |
579 | char * | |
580 | gengetopt_strdup (const char *s) | |
581 | { | |
582 | < | char *result = (char*)malloc(strlen(s) + 1); |
582 | > | char *result = NULL; |
583 | > | if (!s) |
584 | > | return result; |
585 | > | |
586 | > | result = (char*)malloc(strlen(s) + 1); |
587 | if (result == (char*)0) | |
588 | return (char*)0; | |
589 | strcpy(result, s); | |
590 | return result; | |
591 | } | |
592 | ||
593 | < | int |
594 | < | cmdline_parser (int argc, char * const *argv, struct gengetopt_args_info *args_info) |
593 | > | static void |
594 | > | reset_group_staticProps(struct gengetopt_args_info *args_info); |
595 | > | |
596 | > | static void |
597 | > | reset_group_staticProps(struct gengetopt_args_info *args_info) |
598 | { | |
599 | < | int c; /* Character of the parsed option. */ |
600 | < | int missing_required_options = 0; |
79 | < | int staticProps_group_counter = 0; |
599 | > | if (! args_info->staticProps_group_counter) |
600 | > | return; |
601 | ||
602 | < | |
603 | < | args_info->help_given = 0 ; |
83 | < | args_info->version_given = 0 ; |
84 | < | args_info->input_given = 0 ; |
85 | < | args_info->output_given = 0 ; |
86 | < | args_info->step_given = 0 ; |
87 | < | args_info->nrbins_given = 0 ; |
88 | < | args_info->nanglebins_given = 0 ; |
89 | < | args_info->length_given = 0 ; |
90 | < | args_info->sele1_given = 0 ; |
91 | < | args_info->sele2_given = 0 ; |
92 | < | args_info->refsele_given = 0 ; |
602 | > | args_info->bo_given = 0 ; |
603 | > | args_info->bor_given = 0 ; |
604 | args_info->gofr_given = 0 ; | |
605 | args_info->r_theta_given = 0 ; | |
606 | args_info->r_omega_given = 0 ; | |
607 | args_info->theta_omega_given = 0 ; | |
608 | args_info->gxyz_given = 0 ; | |
609 | args_info->p2_given = 0 ; | |
610 | < | #define clear_args() { \ |
611 | < | args_info->input_arg = NULL; \ |
612 | < | args_info->output_arg = NULL; \ |
613 | < | args_info->step_arg = 1 ;\ |
614 | < | args_info->nrbins_arg = 100 ;\ |
615 | < | args_info->nanglebins_arg = 50 ;\ |
616 | < | args_info->sele1_arg = NULL; \ |
617 | < | args_info->sele2_arg = NULL; \ |
107 | < | args_info->refsele_arg = NULL; \ |
610 | > | args_info->rp2_given = 0 ; |
611 | > | args_info->scd_given = 0 ; |
612 | > | args_info->density_given = 0 ; |
613 | > | args_info->slab_density_given = 0 ; |
614 | > | args_info->hxy_given = 0 ; |
615 | > | args_info->rho_r_given = 0 ; |
616 | > | |
617 | > | args_info->staticProps_group_counter = 0; |
618 | } | |
619 | ||
620 | < | clear_args(); |
620 | > | int |
621 | > | cmdline_parser (int argc, char * const *argv, struct gengetopt_args_info *args_info) |
622 | > | { |
623 | > | return cmdline_parser2 (argc, argv, args_info, 0, 1, 1); |
624 | > | } |
625 | ||
626 | + | int |
627 | + | cmdline_parser2 (int argc, char * const *argv, struct gengetopt_args_info *args_info, int override, int initialize, int check_required) |
628 | + | { |
629 | + | int result; |
630 | + | |
631 | + | result = cmdline_parser_internal (argc, argv, args_info, override, initialize, check_required, NULL); |
632 | + | |
633 | + | if (result == EXIT_FAILURE) |
634 | + | { |
635 | + | cmdline_parser_free (args_info); |
636 | + | exit (EXIT_FAILURE); |
637 | + | } |
638 | + | |
639 | + | return result; |
640 | + | } |
641 | + | |
642 | + | int |
643 | + | cmdline_parser_required (struct gengetopt_args_info *args_info, const char *prog_name) |
644 | + | { |
645 | + | int result = EXIT_SUCCESS; |
646 | + | |
647 | + | if (cmdline_parser_required2(args_info, prog_name, NULL) > 0) |
648 | + | result = EXIT_FAILURE; |
649 | + | |
650 | + | if (result == EXIT_FAILURE) |
651 | + | { |
652 | + | cmdline_parser_free (args_info); |
653 | + | exit (EXIT_FAILURE); |
654 | + | } |
655 | + | |
656 | + | return result; |
657 | + | } |
658 | + | |
659 | + | int |
660 | + | cmdline_parser_required2 (struct gengetopt_args_info *args_info, const char *prog_name, const char *additional_error) |
661 | + | { |
662 | + | int error = 0; |
663 | + | |
664 | + | /* checks for required options */ |
665 | + | if (! args_info->input_given) |
666 | + | { |
667 | + | fprintf (stderr, "%s: '--input' ('-i') option required%s\n", prog_name, (additional_error ? additional_error : "")); |
668 | + | error = 1; |
669 | + | } |
670 | + | |
671 | + | if (args_info->staticProps_group_counter == 0) |
672 | + | { |
673 | + | fprintf (stderr, "%s: %d options of group staticProps were given. One is required.%s\n", prog_name, args_info->staticProps_group_counter, (additional_error ? additional_error : "")); |
674 | + | error = 1; |
675 | + | } |
676 | + | |
677 | + | |
678 | + | /* checks for dependences among options */ |
679 | + | |
680 | + | return error; |
681 | + | } |
682 | + | |
683 | + | int |
684 | + | cmdline_parser_internal (int argc, char * const *argv, struct gengetopt_args_info *args_info, int override, int initialize, int check_required, const char *additional_error) |
685 | + | { |
686 | + | int c; /* Character of the parsed option. */ |
687 | + | |
688 | + | int error = 0; |
689 | + | struct gengetopt_args_info local_args_info; |
690 | + | |
691 | + | if (initialize) |
692 | + | cmdline_parser_init (args_info); |
693 | + | |
694 | + | cmdline_parser_init (&local_args_info); |
695 | + | |
696 | optarg = 0; | |
697 | < | optind = 1; |
697 | > | optind = 0; |
698 | opterr = 1; | |
699 | optopt = '?'; | |
700 | ||
# | Line 125 | Line 709 | cmdline_parser (int argc, char * const *argv, struct g | |
709 | { "input", 1, NULL, 'i' }, | |
710 | { "output", 1, NULL, 'o' }, | |
711 | { "step", 1, NULL, 'n' }, | |
712 | < | { "nrbins", 1, NULL, 'r' }, |
712 | > | { "nbins", 1, NULL, 'b' }, |
713 | > | { "nbins_x", 1, NULL, 'x' }, |
714 | > | { "nbins_y", 1, NULL, 'y' }, |
715 | { "nanglebins", 1, NULL, 'a' }, | |
716 | < | { "length", 1, NULL, 'l' }, |
716 | > | { "length", 1, NULL, 0 }, |
717 | > | { "rcut", 1, NULL, 'c' }, |
718 | > | { "zoffset", 1, NULL, 'z' }, |
719 | { "sele1", 1, NULL, 0 }, | |
720 | { "sele2", 1, NULL, 0 }, | |
721 | + | { "sele3", 1, NULL, 0 }, |
722 | { "refsele", 1, NULL, 0 }, | |
723 | < | { "gofr", 0, NULL, 0 }, |
723 | > | { "molname", 1, NULL, 0 }, |
724 | > | { "begin", 1, NULL, 0 }, |
725 | > | { "end", 1, NULL, 0 }, |
726 | > | { "radius", 1, NULL, 0 }, |
727 | > | { "bo", 0, NULL, 0 }, |
728 | > | { "bor", 0, NULL, 0 }, |
729 | > | { "gofr", 0, NULL, 'g' }, |
730 | { "r_theta", 0, NULL, 0 }, | |
731 | { "r_omega", 0, NULL, 0 }, | |
732 | { "theta_omega", 0, NULL, 0 }, | |
733 | { "gxyz", 0, NULL, 0 }, | |
734 | < | { "p2", 0, NULL, 0 }, |
734 | > | { "p2", 0, NULL, 'p' }, |
735 | > | { "rp2", 0, NULL, 0 }, |
736 | > | { "scd", 0, NULL, 's' }, |
737 | > | { "density", 0, NULL, 'd' }, |
738 | > | { "slab_density", 0, NULL, 0 }, |
739 | > | { "hxy", 0, NULL, 0 }, |
740 | > | { "rho_r", 0, NULL, 0 }, |
741 | { NULL, 0, NULL, 0 } | |
742 | }; | |
743 | ||
744 | stop_char = 0; | |
745 | < | c = getopt_long (argc, argv, "hVi:o:n:r:a:l:", long_options, &option_index); |
745 | > | c = getopt_long (argc, argv, "hVi:o:n:b:x:y:a:c:z:gpsd", long_options, &option_index); |
746 | ||
747 | if (c == -1) break; /* Exit from `while (1)' loop. */ | |
748 | ||
749 | switch (c) | |
750 | { | |
751 | case 'h': /* Print help and exit. */ | |
151 | – | clear_args (); |
752 | cmdline_parser_print_help (); | |
753 | + | cmdline_parser_free (&local_args_info); |
754 | exit (EXIT_SUCCESS); | |
755 | ||
756 | case 'V': /* Print version and exit. */ | |
156 | – | clear_args (); |
757 | cmdline_parser_print_version (); | |
758 | + | cmdline_parser_free (&local_args_info); |
759 | exit (EXIT_SUCCESS); | |
760 | ||
761 | case 'i': /* input dump file. */ | |
762 | < | if (args_info->input_given) |
762 | > | if (local_args_info.input_given) |
763 | { | |
764 | < | fprintf (stderr, "%s: `--input' (`-i') option given more than once\n", CMDLINE_PARSER_PACKAGE); |
765 | < | clear_args (); |
165 | < | exit (EXIT_FAILURE); |
764 | > | fprintf (stderr, "%s: `--input' (`-i') option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); |
765 | > | goto failure; |
766 | } | |
767 | + | if (args_info->input_given && ! override) |
768 | + | continue; |
769 | + | local_args_info.input_given = 1; |
770 | args_info->input_given = 1; | |
771 | + | if (args_info->input_arg) |
772 | + | free (args_info->input_arg); /* free previous string */ |
773 | args_info->input_arg = gengetopt_strdup (optarg); | |
774 | + | if (args_info->input_orig) |
775 | + | free (args_info->input_orig); /* free previous string */ |
776 | + | args_info->input_orig = gengetopt_strdup (optarg); |
777 | break; | |
778 | ||
779 | case 'o': /* output file name. */ | |
780 | < | if (args_info->output_given) |
780 | > | if (local_args_info.output_given) |
781 | { | |
782 | < | fprintf (stderr, "%s: `--output' (`-o') option given more than once\n", CMDLINE_PARSER_PACKAGE); |
783 | < | clear_args (); |
176 | < | exit (EXIT_FAILURE); |
782 | > | fprintf (stderr, "%s: `--output' (`-o') option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); |
783 | > | goto failure; |
784 | } | |
785 | + | if (args_info->output_given && ! override) |
786 | + | continue; |
787 | + | local_args_info.output_given = 1; |
788 | args_info->output_given = 1; | |
789 | + | if (args_info->output_arg) |
790 | + | free (args_info->output_arg); /* free previous string */ |
791 | args_info->output_arg = gengetopt_strdup (optarg); | |
792 | + | if (args_info->output_orig) |
793 | + | free (args_info->output_orig); /* free previous string */ |
794 | + | args_info->output_orig = gengetopt_strdup (optarg); |
795 | break; | |
796 | ||
797 | case 'n': /* process every n frame. */ | |
798 | < | if (args_info->step_given) |
798 | > | if (local_args_info.step_given) |
799 | { | |
800 | < | fprintf (stderr, "%s: `--step' (`-n') option given more than once\n", CMDLINE_PARSER_PACKAGE); |
801 | < | clear_args (); |
187 | < | exit (EXIT_FAILURE); |
800 | > | fprintf (stderr, "%s: `--step' (`-n') option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); |
801 | > | goto failure; |
802 | } | |
803 | + | if (args_info->step_given && ! override) |
804 | + | continue; |
805 | + | local_args_info.step_given = 1; |
806 | args_info->step_given = 1; | |
807 | < | args_info->step_arg = strtol (optarg,&stop_char,0); |
807 | > | args_info->step_arg = strtol (optarg, &stop_char, 0); |
808 | > | if (!(stop_char && *stop_char == '\0')) { |
809 | > | fprintf(stderr, "%s: invalid numeric value: %s\n", argv[0], optarg); |
810 | > | goto failure; |
811 | > | } |
812 | > | if (args_info->step_orig) |
813 | > | free (args_info->step_orig); /* free previous string */ |
814 | > | args_info->step_orig = gengetopt_strdup (optarg); |
815 | break; | |
816 | ||
817 | < | case 'r': /* number of bins for distance. */ |
818 | < | if (args_info->nrbins_given) |
817 | > | case 'b': /* number of bins (general purpose). */ |
818 | > | if (local_args_info.nbins_given) |
819 | { | |
820 | < | fprintf (stderr, "%s: `--nrbins' (`-r') option given more than once\n", CMDLINE_PARSER_PACKAGE); |
821 | < | clear_args (); |
198 | < | exit (EXIT_FAILURE); |
820 | > | fprintf (stderr, "%s: `--nbins' (`-b') option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); |
821 | > | goto failure; |
822 | } | |
823 | < | args_info->nrbins_given = 1; |
824 | < | args_info->nrbins_arg = strtol (optarg,&stop_char,0); |
823 | > | if (args_info->nbins_given && ! override) |
824 | > | continue; |
825 | > | local_args_info.nbins_given = 1; |
826 | > | args_info->nbins_given = 1; |
827 | > | args_info->nbins_arg = strtol (optarg, &stop_char, 0); |
828 | > | if (!(stop_char && *stop_char == '\0')) { |
829 | > | fprintf(stderr, "%s: invalid numeric value: %s\n", argv[0], optarg); |
830 | > | goto failure; |
831 | > | } |
832 | > | if (args_info->nbins_orig) |
833 | > | free (args_info->nbins_orig); /* free previous string */ |
834 | > | args_info->nbins_orig = gengetopt_strdup (optarg); |
835 | break; | |
836 | ||
837 | + | case 'x': /* number of bins in x axis. */ |
838 | + | if (local_args_info.nbins_x_given) |
839 | + | { |
840 | + | fprintf (stderr, "%s: `--nbins_x' (`-x') option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); |
841 | + | goto failure; |
842 | + | } |
843 | + | if (args_info->nbins_x_given && ! override) |
844 | + | continue; |
845 | + | local_args_info.nbins_x_given = 1; |
846 | + | args_info->nbins_x_given = 1; |
847 | + | args_info->nbins_x_arg = strtol (optarg, &stop_char, 0); |
848 | + | if (!(stop_char && *stop_char == '\0')) { |
849 | + | fprintf(stderr, "%s: invalid numeric value: %s\n", argv[0], optarg); |
850 | + | goto failure; |
851 | + | } |
852 | + | if (args_info->nbins_x_orig) |
853 | + | free (args_info->nbins_x_orig); /* free previous string */ |
854 | + | args_info->nbins_x_orig = gengetopt_strdup (optarg); |
855 | + | break; |
856 | + | |
857 | + | case 'y': /* number of bins in y axis. */ |
858 | + | if (local_args_info.nbins_y_given) |
859 | + | { |
860 | + | fprintf (stderr, "%s: `--nbins_y' (`-y') option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); |
861 | + | goto failure; |
862 | + | } |
863 | + | if (args_info->nbins_y_given && ! override) |
864 | + | continue; |
865 | + | local_args_info.nbins_y_given = 1; |
866 | + | args_info->nbins_y_given = 1; |
867 | + | args_info->nbins_y_arg = strtol (optarg, &stop_char, 0); |
868 | + | if (!(stop_char && *stop_char == '\0')) { |
869 | + | fprintf(stderr, "%s: invalid numeric value: %s\n", argv[0], optarg); |
870 | + | goto failure; |
871 | + | } |
872 | + | if (args_info->nbins_y_orig) |
873 | + | free (args_info->nbins_y_orig); /* free previous string */ |
874 | + | args_info->nbins_y_orig = gengetopt_strdup (optarg); |
875 | + | break; |
876 | + | |
877 | case 'a': /* number of bins for cos(angle). */ | |
878 | < | if (args_info->nanglebins_given) |
878 | > | if (local_args_info.nanglebins_given) |
879 | { | |
880 | < | fprintf (stderr, "%s: `--nanglebins' (`-a') option given more than once\n", CMDLINE_PARSER_PACKAGE); |
881 | < | clear_args (); |
209 | < | exit (EXIT_FAILURE); |
880 | > | fprintf (stderr, "%s: `--nanglebins' (`-a') option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); |
881 | > | goto failure; |
882 | } | |
883 | + | if (args_info->nanglebins_given && ! override) |
884 | + | continue; |
885 | + | local_args_info.nanglebins_given = 1; |
886 | args_info->nanglebins_given = 1; | |
887 | < | args_info->nanglebins_arg = strtol (optarg,&stop_char,0); |
887 | > | args_info->nanglebins_arg = strtol (optarg, &stop_char, 0); |
888 | > | if (!(stop_char && *stop_char == '\0')) { |
889 | > | fprintf(stderr, "%s: invalid numeric value: %s\n", argv[0], optarg); |
890 | > | goto failure; |
891 | > | } |
892 | > | if (args_info->nanglebins_orig) |
893 | > | free (args_info->nanglebins_orig); /* free previous string */ |
894 | > | args_info->nanglebins_orig = gengetopt_strdup (optarg); |
895 | break; | |
896 | ||
897 | < | case 'l': /* maximum length (Defaults to 1/2 smallest length of first frame). */ |
898 | < | if (args_info->length_given) |
897 | > | case 'c': /* cutoff radius (rcut). */ |
898 | > | if (local_args_info.rcut_given) |
899 | { | |
900 | < | fprintf (stderr, "%s: `--length' (`-l') option given more than once\n", CMDLINE_PARSER_PACKAGE); |
901 | < | clear_args (); |
220 | < | exit (EXIT_FAILURE); |
900 | > | fprintf (stderr, "%s: `--rcut' (`-c') option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); |
901 | > | goto failure; |
902 | } | |
903 | < | args_info->length_given = 1; |
904 | < | args_info->length_arg = strtod (optarg, NULL); |
903 | > | if (args_info->rcut_given && ! override) |
904 | > | continue; |
905 | > | local_args_info.rcut_given = 1; |
906 | > | args_info->rcut_given = 1; |
907 | > | args_info->rcut_arg = strtod (optarg, &stop_char); |
908 | > | if (!(stop_char && *stop_char == '\0')) { |
909 | > | fprintf(stderr, "%s: invalid numeric value: %s\n", argv[0], optarg); |
910 | > | goto failure; |
911 | > | } |
912 | > | if (args_info->rcut_orig) |
913 | > | free (args_info->rcut_orig); /* free previous string */ |
914 | > | args_info->rcut_orig = gengetopt_strdup (optarg); |
915 | break; | |
916 | ||
917 | + | case 'z': /* Where to set the zero for the slab_density calculation. */ |
918 | + | if (local_args_info.zoffset_given) |
919 | + | { |
920 | + | fprintf (stderr, "%s: `--zoffset' (`-z') option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); |
921 | + | goto failure; |
922 | + | } |
923 | + | if (args_info->zoffset_given && ! override) |
924 | + | continue; |
925 | + | local_args_info.zoffset_given = 1; |
926 | + | args_info->zoffset_given = 1; |
927 | + | args_info->zoffset_arg = strtod (optarg, &stop_char); |
928 | + | if (!(stop_char && *stop_char == '\0')) { |
929 | + | fprintf(stderr, "%s: invalid numeric value: %s\n", argv[0], optarg); |
930 | + | goto failure; |
931 | + | } |
932 | + | if (args_info->zoffset_orig) |
933 | + | free (args_info->zoffset_orig); /* free previous string */ |
934 | + | args_info->zoffset_orig = gengetopt_strdup (optarg); |
935 | + | break; |
936 | ||
937 | + | case 'g': /* g(r). */ |
938 | + | if (local_args_info.gofr_given) |
939 | + | { |
940 | + | fprintf (stderr, "%s: `--gofr' (`-g') option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); |
941 | + | goto failure; |
942 | + | } |
943 | + | if (args_info->gofr_given && ! override) |
944 | + | continue; |
945 | + | local_args_info.gofr_given = 1; |
946 | + | args_info->gofr_given = 1; |
947 | + | if (args_info->staticProps_group_counter && override) |
948 | + | reset_group_staticProps (args_info); |
949 | + | args_info->staticProps_group_counter += 1; |
950 | + | break; |
951 | + | |
952 | + | case 'p': /* p2 order parameter (--sele1 and --sele2 must be specified). */ |
953 | + | if (local_args_info.p2_given) |
954 | + | { |
955 | + | fprintf (stderr, "%s: `--p2' (`-p') option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); |
956 | + | goto failure; |
957 | + | } |
958 | + | if (args_info->p2_given && ! override) |
959 | + | continue; |
960 | + | local_args_info.p2_given = 1; |
961 | + | args_info->p2_given = 1; |
962 | + | if (args_info->staticProps_group_counter && override) |
963 | + | reset_group_staticProps (args_info); |
964 | + | args_info->staticProps_group_counter += 1; |
965 | + | break; |
966 | + | |
967 | + | case 's': /* scd order parameter (either --sele1, --sele2, --sele3 are specified or --molname, --begin, --end are specified). */ |
968 | + | if (local_args_info.scd_given) |
969 | + | { |
970 | + | fprintf (stderr, "%s: `--scd' (`-s') option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); |
971 | + | goto failure; |
972 | + | } |
973 | + | if (args_info->scd_given && ! override) |
974 | + | continue; |
975 | + | local_args_info.scd_given = 1; |
976 | + | args_info->scd_given = 1; |
977 | + | if (args_info->staticProps_group_counter && override) |
978 | + | reset_group_staticProps (args_info); |
979 | + | args_info->staticProps_group_counter += 1; |
980 | + | break; |
981 | + | |
982 | + | case 'd': /* density plot. */ |
983 | + | if (local_args_info.density_given) |
984 | + | { |
985 | + | fprintf (stderr, "%s: `--density' (`-d') option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); |
986 | + | goto failure; |
987 | + | } |
988 | + | if (args_info->density_given && ! override) |
989 | + | continue; |
990 | + | local_args_info.density_given = 1; |
991 | + | args_info->density_given = 1; |
992 | + | if (args_info->staticProps_group_counter && override) |
993 | + | reset_group_staticProps (args_info); |
994 | + | args_info->staticProps_group_counter += 1; |
995 | + | break; |
996 | + | |
997 | + | |
998 | case 0: /* Long option with no short option */ | |
999 | < | /* select first stuntdouble set. */ |
1000 | < | if (strcmp (long_options[option_index].name, "sele1") == 0) |
999 | > | /* maximum length (Defaults to 1/2 smallest length of first frame). */ |
1000 | > | if (strcmp (long_options[option_index].name, "length") == 0) |
1001 | { | |
1002 | < | if (args_info->sele1_given) |
1002 | > | if (local_args_info.length_given) |
1003 | { | |
1004 | < | fprintf (stderr, "%s: `--sele1' option given more than once\n", CMDLINE_PARSER_PACKAGE); |
1005 | < | clear_args (); |
235 | < | exit (EXIT_FAILURE); |
1004 | > | fprintf (stderr, "%s: `--length' option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); |
1005 | > | goto failure; |
1006 | } | |
1007 | + | if (args_info->length_given && ! override) |
1008 | + | continue; |
1009 | + | local_args_info.length_given = 1; |
1010 | + | args_info->length_given = 1; |
1011 | + | args_info->length_arg = strtod (optarg, &stop_char); |
1012 | + | if (!(stop_char && *stop_char == '\0')) { |
1013 | + | fprintf(stderr, "%s: invalid numeric value: %s\n", argv[0], optarg); |
1014 | + | goto failure; |
1015 | + | } |
1016 | + | if (args_info->length_orig) |
1017 | + | free (args_info->length_orig); /* free previous string */ |
1018 | + | args_info->length_orig = gengetopt_strdup (optarg); |
1019 | + | } |
1020 | + | /* select the first stuntdouble set. */ |
1021 | + | else if (strcmp (long_options[option_index].name, "sele1") == 0) |
1022 | + | { |
1023 | + | if (local_args_info.sele1_given) |
1024 | + | { |
1025 | + | fprintf (stderr, "%s: `--sele1' option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); |
1026 | + | goto failure; |
1027 | + | } |
1028 | + | if (args_info->sele1_given && ! override) |
1029 | + | continue; |
1030 | + | local_args_info.sele1_given = 1; |
1031 | args_info->sele1_given = 1; | |
1032 | + | if (args_info->sele1_arg) |
1033 | + | free (args_info->sele1_arg); /* free previous string */ |
1034 | args_info->sele1_arg = gengetopt_strdup (optarg); | |
1035 | < | break; |
1035 | > | if (args_info->sele1_orig) |
1036 | > | free (args_info->sele1_orig); /* free previous string */ |
1037 | > | args_info->sele1_orig = gengetopt_strdup (optarg); |
1038 | } | |
1039 | < | |
242 | < | /* select second stuntdouble set. */ |
1039 | > | /* select the second stuntdouble set. */ |
1040 | else if (strcmp (long_options[option_index].name, "sele2") == 0) | |
1041 | { | |
1042 | < | if (args_info->sele2_given) |
1042 | > | if (local_args_info.sele2_given) |
1043 | { | |
1044 | < | fprintf (stderr, "%s: `--sele2' option given more than once\n", CMDLINE_PARSER_PACKAGE); |
1045 | < | clear_args (); |
249 | < | exit (EXIT_FAILURE); |
1044 | > | fprintf (stderr, "%s: `--sele2' option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); |
1045 | > | goto failure; |
1046 | } | |
1047 | + | if (args_info->sele2_given && ! override) |
1048 | + | continue; |
1049 | + | local_args_info.sele2_given = 1; |
1050 | args_info->sele2_given = 1; | |
1051 | + | if (args_info->sele2_arg) |
1052 | + | free (args_info->sele2_arg); /* free previous string */ |
1053 | args_info->sele2_arg = gengetopt_strdup (optarg); | |
1054 | < | break; |
1054 | > | if (args_info->sele2_orig) |
1055 | > | free (args_info->sele2_orig); /* free previous string */ |
1056 | > | args_info->sele2_orig = gengetopt_strdup (optarg); |
1057 | } | |
1058 | < | |
1058 | > | /* select the third stuntdouble set. */ |
1059 | > | else if (strcmp (long_options[option_index].name, "sele3") == 0) |
1060 | > | { |
1061 | > | if (local_args_info.sele3_given) |
1062 | > | { |
1063 | > | fprintf (stderr, "%s: `--sele3' option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); |
1064 | > | goto failure; |
1065 | > | } |
1066 | > | if (args_info->sele3_given && ! override) |
1067 | > | continue; |
1068 | > | local_args_info.sele3_given = 1; |
1069 | > | args_info->sele3_given = 1; |
1070 | > | if (args_info->sele3_arg) |
1071 | > | free (args_info->sele3_arg); /* free previous string */ |
1072 | > | args_info->sele3_arg = gengetopt_strdup (optarg); |
1073 | > | if (args_info->sele3_orig) |
1074 | > | free (args_info->sele3_orig); /* free previous string */ |
1075 | > | args_info->sele3_orig = gengetopt_strdup (optarg); |
1076 | > | } |
1077 | /* select reference (use and only use with --gxyz). */ | |
1078 | else if (strcmp (long_options[option_index].name, "refsele") == 0) | |
1079 | { | |
1080 | < | if (args_info->refsele_given) |
1080 | > | if (local_args_info.refsele_given) |
1081 | { | |
1082 | < | fprintf (stderr, "%s: `--refsele' option given more than once\n", CMDLINE_PARSER_PACKAGE); |
1083 | < | clear_args (); |
263 | < | exit (EXIT_FAILURE); |
1082 | > | fprintf (stderr, "%s: `--refsele' option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); |
1083 | > | goto failure; |
1084 | } | |
1085 | + | if (args_info->refsele_given && ! override) |
1086 | + | continue; |
1087 | + | local_args_info.refsele_given = 1; |
1088 | args_info->refsele_given = 1; | |
1089 | + | if (args_info->refsele_arg) |
1090 | + | free (args_info->refsele_arg); /* free previous string */ |
1091 | args_info->refsele_arg = gengetopt_strdup (optarg); | |
1092 | < | break; |
1092 | > | if (args_info->refsele_orig) |
1093 | > | free (args_info->refsele_orig); /* free previous string */ |
1094 | > | args_info->refsele_orig = gengetopt_strdup (optarg); |
1095 | } | |
1096 | < | |
1097 | < | /* g(r). */ |
271 | < | else if (strcmp (long_options[option_index].name, "gofr") == 0) |
1096 | > | /* molecule name. */ |
1097 | > | else if (strcmp (long_options[option_index].name, "molname") == 0) |
1098 | { | |
1099 | < | if (args_info->gofr_given) |
1099 | > | if (local_args_info.molname_given) |
1100 | { | |
1101 | < | fprintf (stderr, "%s: `--gofr' option given more than once\n", CMDLINE_PARSER_PACKAGE); |
1102 | < | clear_args (); |
277 | < | exit (EXIT_FAILURE); |
1101 | > | fprintf (stderr, "%s: `--molname' option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); |
1102 | > | goto failure; |
1103 | } | |
1104 | < | args_info->gofr_given = 1; staticProps_group_counter += 1; |
1105 | < | |
1104 | > | if (args_info->molname_given && ! override) |
1105 | > | continue; |
1106 | > | local_args_info.molname_given = 1; |
1107 | > | args_info->molname_given = 1; |
1108 | > | if (args_info->molname_arg) |
1109 | > | free (args_info->molname_arg); /* free previous string */ |
1110 | > | args_info->molname_arg = gengetopt_strdup (optarg); |
1111 | > | if (args_info->molname_orig) |
1112 | > | free (args_info->molname_orig); /* free previous string */ |
1113 | > | args_info->molname_orig = gengetopt_strdup (optarg); |
1114 | > | } |
1115 | > | /* begin internal index. */ |
1116 | > | else if (strcmp (long_options[option_index].name, "begin") == 0) |
1117 | > | { |
1118 | > | if (local_args_info.begin_given) |
1119 | > | { |
1120 | > | fprintf (stderr, "%s: `--begin' option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); |
1121 | > | goto failure; |
1122 | > | } |
1123 | > | if (args_info->begin_given && ! override) |
1124 | > | continue; |
1125 | > | local_args_info.begin_given = 1; |
1126 | > | args_info->begin_given = 1; |
1127 | > | args_info->begin_arg = strtol (optarg, &stop_char, 0); |
1128 | > | if (!(stop_char && *stop_char == '\0')) { |
1129 | > | fprintf(stderr, "%s: invalid numeric value: %s\n", argv[0], optarg); |
1130 | > | goto failure; |
1131 | > | } |
1132 | > | if (args_info->begin_orig) |
1133 | > | free (args_info->begin_orig); /* free previous string */ |
1134 | > | args_info->begin_orig = gengetopt_strdup (optarg); |
1135 | > | } |
1136 | > | /* end internal index. */ |
1137 | > | else if (strcmp (long_options[option_index].name, "end") == 0) |
1138 | > | { |
1139 | > | if (local_args_info.end_given) |
1140 | > | { |
1141 | > | fprintf (stderr, "%s: `--end' option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); |
1142 | > | goto failure; |
1143 | > | } |
1144 | > | if (args_info->end_given && ! override) |
1145 | > | continue; |
1146 | > | local_args_info.end_given = 1; |
1147 | > | args_info->end_given = 1; |
1148 | > | args_info->end_arg = strtol (optarg, &stop_char, 0); |
1149 | > | if (!(stop_char && *stop_char == '\0')) { |
1150 | > | fprintf(stderr, "%s: invalid numeric value: %s\n", argv[0], optarg); |
1151 | > | goto failure; |
1152 | > | } |
1153 | > | if (args_info->end_orig) |
1154 | > | free (args_info->end_orig); /* free previous string */ |
1155 | > | args_info->end_orig = gengetopt_strdup (optarg); |
1156 | > | } |
1157 | > | /* nanoparticle radius. */ |
1158 | > | else if (strcmp (long_options[option_index].name, "radius") == 0) |
1159 | > | { |
1160 | > | if (local_args_info.radius_given) |
1161 | > | { |
1162 | > | fprintf (stderr, "%s: `--radius' option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); |
1163 | > | goto failure; |
1164 | > | } |
1165 | > | if (args_info->radius_given && ! override) |
1166 | > | continue; |
1167 | > | local_args_info.radius_given = 1; |
1168 | > | args_info->radius_given = 1; |
1169 | > | args_info->radius_arg = strtod (optarg, &stop_char); |
1170 | > | if (!(stop_char && *stop_char == '\0')) { |
1171 | > | fprintf(stderr, "%s: invalid numeric value: %s\n", argv[0], optarg); |
1172 | > | goto failure; |
1173 | > | } |
1174 | > | if (args_info->radius_orig) |
1175 | > | free (args_info->radius_orig); /* free previous string */ |
1176 | > | args_info->radius_orig = gengetopt_strdup (optarg); |
1177 | > | } |
1178 | > | /* bond order parameter (--rcut must be specified). */ |
1179 | > | else if (strcmp (long_options[option_index].name, "bo") == 0) |
1180 | > | { |
1181 | > | if (local_args_info.bo_given) |
1182 | > | { |
1183 | > | fprintf (stderr, "%s: `--bo' option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); |
1184 | > | goto failure; |
1185 | > | } |
1186 | > | if (args_info->bo_given && ! override) |
1187 | > | continue; |
1188 | > | local_args_info.bo_given = 1; |
1189 | > | args_info->bo_given = 1; |
1190 | > | if (args_info->staticProps_group_counter && override) |
1191 | > | reset_group_staticProps (args_info); |
1192 | > | args_info->staticProps_group_counter += 1; |
1193 | break; | |
1194 | } | |
1195 | < | |
1195 | > | /* bond order parameter as a function of radius (--rcut must be specified). */ |
1196 | > | else if (strcmp (long_options[option_index].name, "bor") == 0) |
1197 | > | { |
1198 | > | if (local_args_info.bor_given) |
1199 | > | { |
1200 | > | fprintf (stderr, "%s: `--bor' option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); |
1201 | > | goto failure; |
1202 | > | } |
1203 | > | if (args_info->bor_given && ! override) |
1204 | > | continue; |
1205 | > | local_args_info.bor_given = 1; |
1206 | > | args_info->bor_given = 1; |
1207 | > | if (args_info->staticProps_group_counter && override) |
1208 | > | reset_group_staticProps (args_info); |
1209 | > | args_info->staticProps_group_counter += 1; |
1210 | > | break; |
1211 | > | } |
1212 | /* g(r, cos(theta)). */ | |
1213 | else if (strcmp (long_options[option_index].name, "r_theta") == 0) | |
1214 | { | |
1215 | < | if (args_info->r_theta_given) |
1215 | > | if (local_args_info.r_theta_given) |
1216 | { | |
1217 | < | fprintf (stderr, "%s: `--r_theta' option given more than once\n", CMDLINE_PARSER_PACKAGE); |
1218 | < | clear_args (); |
291 | < | exit (EXIT_FAILURE); |
1217 | > | fprintf (stderr, "%s: `--r_theta' option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); |
1218 | > | goto failure; |
1219 | } | |
1220 | < | args_info->r_theta_given = 1; staticProps_group_counter += 1; |
1221 | < | |
1220 | > | if (args_info->r_theta_given && ! override) |
1221 | > | continue; |
1222 | > | local_args_info.r_theta_given = 1; |
1223 | > | args_info->r_theta_given = 1; |
1224 | > | if (args_info->staticProps_group_counter && override) |
1225 | > | reset_group_staticProps (args_info); |
1226 | > | args_info->staticProps_group_counter += 1; |
1227 | break; | |
1228 | } | |
297 | – | |
1229 | /* g(r, cos(omega)). */ | |
1230 | else if (strcmp (long_options[option_index].name, "r_omega") == 0) | |
1231 | { | |
1232 | < | if (args_info->r_omega_given) |
1232 | > | if (local_args_info.r_omega_given) |
1233 | { | |
1234 | < | fprintf (stderr, "%s: `--r_omega' option given more than once\n", CMDLINE_PARSER_PACKAGE); |
1235 | < | clear_args (); |
305 | < | exit (EXIT_FAILURE); |
1234 | > | fprintf (stderr, "%s: `--r_omega' option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); |
1235 | > | goto failure; |
1236 | } | |
1237 | < | args_info->r_omega_given = 1; staticProps_group_counter += 1; |
1238 | < | |
1237 | > | if (args_info->r_omega_given && ! override) |
1238 | > | continue; |
1239 | > | local_args_info.r_omega_given = 1; |
1240 | > | args_info->r_omega_given = 1; |
1241 | > | if (args_info->staticProps_group_counter && override) |
1242 | > | reset_group_staticProps (args_info); |
1243 | > | args_info->staticProps_group_counter += 1; |
1244 | break; | |
1245 | } | |
311 | – | |
1246 | /* g(cos(theta), cos(omega)). */ | |
1247 | else if (strcmp (long_options[option_index].name, "theta_omega") == 0) | |
1248 | { | |
1249 | < | if (args_info->theta_omega_given) |
1249 | > | if (local_args_info.theta_omega_given) |
1250 | { | |
1251 | < | fprintf (stderr, "%s: `--theta_omega' option given more than once\n", CMDLINE_PARSER_PACKAGE); |
1252 | < | clear_args (); |
319 | < | exit (EXIT_FAILURE); |
1251 | > | fprintf (stderr, "%s: `--theta_omega' option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); |
1252 | > | goto failure; |
1253 | } | |
1254 | < | args_info->theta_omega_given = 1; staticProps_group_counter += 1; |
1255 | < | |
1254 | > | if (args_info->theta_omega_given && ! override) |
1255 | > | continue; |
1256 | > | local_args_info.theta_omega_given = 1; |
1257 | > | args_info->theta_omega_given = 1; |
1258 | > | if (args_info->staticProps_group_counter && override) |
1259 | > | reset_group_staticProps (args_info); |
1260 | > | args_info->staticProps_group_counter += 1; |
1261 | break; | |
1262 | } | |
325 | – | |
1263 | /* g(x, y, z). */ | |
1264 | else if (strcmp (long_options[option_index].name, "gxyz") == 0) | |
1265 | { | |
1266 | < | if (args_info->gxyz_given) |
1266 | > | if (local_args_info.gxyz_given) |
1267 | { | |
1268 | < | fprintf (stderr, "%s: `--gxyz' option given more than once\n", CMDLINE_PARSER_PACKAGE); |
1269 | < | clear_args (); |
333 | < | exit (EXIT_FAILURE); |
1268 | > | fprintf (stderr, "%s: `--gxyz' option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); |
1269 | > | goto failure; |
1270 | } | |
1271 | < | args_info->gxyz_given = 1; staticProps_group_counter += 1; |
1272 | < | |
1271 | > | if (args_info->gxyz_given && ! override) |
1272 | > | continue; |
1273 | > | local_args_info.gxyz_given = 1; |
1274 | > | args_info->gxyz_given = 1; |
1275 | > | if (args_info->staticProps_group_counter && override) |
1276 | > | reset_group_staticProps (args_info); |
1277 | > | args_info->staticProps_group_counter += 1; |
1278 | break; | |
1279 | } | |
1280 | < | |
1281 | < | /* p2 order parameter. */ |
341 | < | else if (strcmp (long_options[option_index].name, "p2") == 0) |
1280 | > | /* rp2 order parameter (--sele1 and --sele2 must be specified). */ |
1281 | > | else if (strcmp (long_options[option_index].name, "rp2") == 0) |
1282 | { | |
1283 | < | if (args_info->p2_given) |
1283 | > | if (local_args_info.rp2_given) |
1284 | { | |
1285 | < | fprintf (stderr, "%s: `--p2' option given more than once\n", CMDLINE_PARSER_PACKAGE); |
1286 | < | clear_args (); |
347 | < | exit (EXIT_FAILURE); |
1285 | > | fprintf (stderr, "%s: `--rp2' option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); |
1286 | > | goto failure; |
1287 | } | |
1288 | < | args_info->p2_given = 1; staticProps_group_counter += 1; |
1289 | < | |
1288 | > | if (args_info->rp2_given && ! override) |
1289 | > | continue; |
1290 | > | local_args_info.rp2_given = 1; |
1291 | > | args_info->rp2_given = 1; |
1292 | > | if (args_info->staticProps_group_counter && override) |
1293 | > | reset_group_staticProps (args_info); |
1294 | > | args_info->staticProps_group_counter += 1; |
1295 | break; | |
1296 | } | |
1297 | + | /* slab density. */ |
1298 | + | else if (strcmp (long_options[option_index].name, "slab_density") == 0) |
1299 | + | { |
1300 | + | if (local_args_info.slab_density_given) |
1301 | + | { |
1302 | + | fprintf (stderr, "%s: `--slab_density' option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); |
1303 | + | goto failure; |
1304 | + | } |
1305 | + | if (args_info->slab_density_given && ! override) |
1306 | + | continue; |
1307 | + | local_args_info.slab_density_given = 1; |
1308 | + | args_info->slab_density_given = 1; |
1309 | + | if (args_info->staticProps_group_counter && override) |
1310 | + | reset_group_staticProps (args_info); |
1311 | + | args_info->staticProps_group_counter += 1; |
1312 | + | break; |
1313 | + | } |
1314 | + | /* hxy. */ |
1315 | + | else if (strcmp (long_options[option_index].name, "hxy") == 0) |
1316 | + | { |
1317 | + | if (local_args_info.hxy_given) |
1318 | + | { |
1319 | + | fprintf (stderr, "%s: `--hxy' option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); |
1320 | + | goto failure; |
1321 | + | } |
1322 | + | if (args_info->hxy_given && ! override) |
1323 | + | continue; |
1324 | + | local_args_info.hxy_given = 1; |
1325 | + | args_info->hxy_given = 1; |
1326 | + | if (args_info->staticProps_group_counter && override) |
1327 | + | reset_group_staticProps (args_info); |
1328 | + | args_info->staticProps_group_counter += 1; |
1329 | + | break; |
1330 | + | } |
1331 | + | /* rho of R. */ |
1332 | + | else if (strcmp (long_options[option_index].name, "rho_r") == 0) |
1333 | + | { |
1334 | + | if (local_args_info.rho_r_given) |
1335 | + | { |
1336 | + | fprintf (stderr, "%s: `--rho_r' option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); |
1337 | + | goto failure; |
1338 | + | } |
1339 | + | if (args_info->rho_r_given && ! override) |
1340 | + | continue; |
1341 | + | local_args_info.rho_r_given = 1; |
1342 | + | args_info->rho_r_given = 1; |
1343 | + | if (args_info->staticProps_group_counter && override) |
1344 | + | reset_group_staticProps (args_info); |
1345 | + | args_info->staticProps_group_counter += 1; |
1346 | + | break; |
1347 | + | } |
1348 | ||
1349 | < | |
1349 | > | break; |
1350 | case '?': /* Invalid option. */ | |
1351 | /* `getopt_long' already printed an error message. */ | |
1352 | < | exit (EXIT_FAILURE); |
1352 | > | goto failure; |
1353 | ||
1354 | default: /* bug: option not considered. */ | |
1355 | < | fprintf (stderr, "%s: option unknown: %c\n", CMDLINE_PARSER_PACKAGE, c); |
1355 | > | fprintf (stderr, "%s: option unknown: %c%s\n", CMDLINE_PARSER_PACKAGE, c, (additional_error ? additional_error : "")); |
1356 | abort (); | |
1357 | } /* switch */ | |
1358 | } /* while */ | |
1359 | ||
1360 | < | if ( staticProps_group_counter != 1) |
1360 | > | if (args_info->staticProps_group_counter > 1) |
1361 | { | |
1362 | < | fprintf (stderr, "%s: %d options of group staticProps were given. One is required\n", CMDLINE_PARSER_PACKAGE, staticProps_group_counter); |
1363 | < | missing_required_options = 1; |
1362 | > | fprintf (stderr, "%s: %d options of group staticProps were given. One is required.%s\n", argv[0], args_info->staticProps_group_counter, (additional_error ? additional_error : "")); |
1363 | > | error = 1; |
1364 | } | |
1365 | ||
1366 | ||
1367 | < | if (! args_info->input_given) |
1367 | > | |
1368 | > | if (check_required) |
1369 | { | |
1370 | < | fprintf (stderr, "%s: '--input' ('-i') option required\n", CMDLINE_PARSER_PACKAGE); |
375 | < | missing_required_options = 1; |
1370 | > | error += cmdline_parser_required2 (args_info, argv[0], additional_error); |
1371 | } | |
377 | – | if ( missing_required_options ) |
378 | – | exit (EXIT_FAILURE); |
1372 | ||
1373 | + | cmdline_parser_release (&local_args_info); |
1374 | + | |
1375 | + | if ( error ) |
1376 | + | return (EXIT_FAILURE); |
1377 | + | |
1378 | + | if (optind < argc) |
1379 | + | { |
1380 | + | int i = 0 ; |
1381 | + | int found_prog_name = 0; |
1382 | + | /* whether program name, i.e., argv[0], is in the remaining args |
1383 | + | (this may happen with some implementations of getopt, |
1384 | + | but surely not with the one included by gengetopt) */ |
1385 | + | |
1386 | + | i = optind; |
1387 | + | while (i < argc) |
1388 | + | if (argv[i++] == argv[0]) { |
1389 | + | found_prog_name = 1; |
1390 | + | break; |
1391 | + | } |
1392 | + | i = 0; |
1393 | + | |
1394 | + | args_info->inputs_num = argc - optind - found_prog_name; |
1395 | + | args_info->inputs = |
1396 | + | (char **)(malloc ((args_info->inputs_num)*sizeof(char *))) ; |
1397 | + | while (optind < argc) |
1398 | + | if (argv[optind++] != argv[0]) |
1399 | + | args_info->inputs[ i++ ] = gengetopt_strdup (argv[optind-1]) ; |
1400 | + | } |
1401 | + | |
1402 | return 0; | |
1403 | + | |
1404 | + | failure: |
1405 | + | |
1406 | + | cmdline_parser_release (&local_args_info); |
1407 | + | return (EXIT_FAILURE); |
1408 | } |
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