| 33 |  | { | 
| 34 |  | cmdline_parser_print_version (); | 
| 35 |  | printf("\n" | 
| 36 | < | "Usage: %s [OPTIONS]...\n", CMDLINE_PARSER_PACKAGE); | 
| 36 | > | "Usage: %s [OPTIONS]...\n", CMDLINE_PARSER_PACKAGE); | 
| 37 |  | printf("\n"); | 
| 38 | < | printf("  -h, --help                    Print help and exit\n"); | 
| 39 | < | printf("  -V, --version                 Print version and exit\n"); | 
| 40 | < | printf("  -i, --input=filename          input dump file\n"); | 
| 41 | < | printf("  -o, --output=filename         output file name\n"); | 
| 42 | < | printf("  -n, --step=INT                process every n frame  (default=`1')\n"); | 
| 43 | < | printf("  -r, --nrbins=INT              number of bins for distance  (default=`50')\n"); | 
| 44 | < | printf("  -a, --nanglebins=INT          number of bins for cos(angle)  (default=`50')\n"); | 
| 45 | < | printf("  -l, --length=DOUBLE           maximum length (Defaults to 1/2 smallest length of first frame)\n"); | 
| 46 | < | printf("      --sele1=selection script  select first stuntdouble set\n"); | 
| 47 | < | printf("      --sele2=selection script  select second stuntdouble set\n"); | 
| 38 | > | printf("  -h, --help                      Print help and exit\n"); | 
| 39 | > | printf("  -V, --version                   Print version and exit\n"); | 
| 40 | > | printf("  -i, --input=filename            input dump file\n"); | 
| 41 | > | printf("  -o, --output=filename           output file name\n"); | 
| 42 | > | printf("  -n, --step=INT                  process every n frame  (default=`1')\n"); | 
| 43 | > | printf("  -r, --nrbins=INT                number of bins for distance  (default=`100')\n"); | 
| 44 | > | printf("  -a, --nanglebins=INT            number of bins for cos(angle)  (default=\n                                    `50')\n"); | 
| 45 | > | printf("  -l, --length=DOUBLE             maximum length (Defaults to 1/2 smallest \n                                    length of first frame)\n"); | 
| 46 | > | printf("      --sele1=selection script    select first stuntdouble set\n"); | 
| 47 | > | printf("      --sele2=selection script    select second stuntdouble set\n"); | 
| 48 | > | printf("      --refsele=selection script  select reference (use and only use with \n                                    --gxyz)\n"); | 
| 49 |  | printf("\n"); | 
| 50 |  | printf(" Group: staticProps  an option of this group is required\n"); | 
| 51 | < | printf("      --gofr                    g(r)\n"); | 
| 52 | < | printf("      --r_theta                 g(r, cos(theta))\n"); | 
| 53 | < | printf("      --r_omega                 g(r, cos(omega))\n"); | 
| 54 | < | printf("      --theta_omega             g(cos(theta), cos(omega))\n"); | 
| 55 | < | printf("      --xyz                     g(x, y, z)\n"); | 
| 51 | > | printf("      --gofr                      g(r)\n"); | 
| 52 | > | printf("      --r_theta                   g(r, cos(theta))\n"); | 
| 53 | > | printf("      --r_omega                   g(r, cos(omega))\n"); | 
| 54 | > | printf("      --theta_omega               g(cos(theta), cos(omega))\n"); | 
| 55 | > | printf("      --gxyz                      g(x, y, z)\n"); | 
| 56 |  | } | 
| 57 |  |  | 
| 58 |  |  | 
| 88 |  | args_info->length_given = 0 ; | 
| 89 |  | args_info->sele1_given = 0 ; | 
| 90 |  | args_info->sele2_given = 0 ; | 
| 91 | + | args_info->refsele_given = 0 ; | 
| 92 |  | args_info->gofr_given = 0 ; | 
| 93 |  | args_info->r_theta_given = 0 ; | 
| 94 |  | args_info->r_omega_given = 0 ; | 
| 95 |  | args_info->theta_omega_given = 0 ; | 
| 96 | < | args_info->xyz_given = 0 ; | 
| 97 | < | #define clear_args() { \ | 
| 98 | < | args_info->input_arg = NULL; \ | 
| 99 | < | args_info->output_arg = NULL; \ | 
| 100 | < | args_info->step_arg = 1 ;\ | 
| 101 | < | args_info->nrbins_arg = 50 ;\ | 
| 102 | < | args_info->nanglebins_arg = 50 ;\ | 
| 103 | < | args_info->sele1_arg = NULL; \ | 
| 104 | < | args_info->sele2_arg = NULL; \ | 
| 105 | < | } | 
| 96 | > | args_info->gxyz_given = 0 ; | 
| 97 | > | #define clear_args() {                          \ | 
| 98 | > | args_info->input_arg = NULL;                \ | 
| 99 | > | args_info->output_arg = NULL;               \ | 
| 100 | > | args_info->step_arg = 1 ;                   \ | 
| 101 | > | args_info->nrbins_arg = 100 ;               \ | 
| 102 | > | args_info->nanglebins_arg = 50 ;            \ | 
| 103 | > | args_info->sele1_arg = NULL;                \ | 
| 104 | > | args_info->sele2_arg = NULL;                \ | 
| 105 | > | args_info->refsele_arg = NULL;              \ | 
| 106 | > | } | 
| 107 |  |  | 
| 108 |  | clear_args(); | 
| 109 |  |  | 
| 128 |  | { "length",     1, NULL, 'l' }, | 
| 129 |  | { "sele1",      1, NULL, 0 }, | 
| 130 |  | { "sele2",      1, NULL, 0 }, | 
| 131 | + | { "refsele",    1, NULL, 0 }, | 
| 132 |  | { "gofr",       0, NULL, 0 }, | 
| 133 |  | { "r_theta",    0, NULL, 0 }, | 
| 134 |  | { "r_omega",    0, NULL, 0 }, | 
| 135 |  | { "theta_omega",        0, NULL, 0 }, | 
| 136 | < | { "xyz",        0, NULL, 0 }, | 
| 136 | > | { "gxyz",       0, NULL, 0 }, | 
| 137 |  | { NULL, 0, NULL, 0 } | 
| 138 |  | }; | 
| 139 |  |  | 
| 209 |  | args_info->nanglebins_arg = strtol (optarg,&stop_char,0); | 
| 210 |  | break; | 
| 211 |  |  | 
| 212 | < | case 'l':       /* maximum length (Defaults to cutoff radius).  */ | 
| 212 | > | case 'l':       /* maximum length (Defaults to 1/2 smallest length of first frame).  */ | 
| 213 |  | if (args_info->length_given) | 
| 214 |  | { | 
| 215 |  | fprintf (stderr, "%s: `--length' (`-l') option given more than once\n", CMDLINE_PARSER_PACKAGE); | 
| 224 |  | case 0: /* Long option with no short option */ | 
| 225 |  | /* select first stuntdouble set.  */ | 
| 226 |  | if (strcmp (long_options[option_index].name, "sele1") == 0) | 
| 227 | < | { | 
| 228 | < | if (args_info->sele1_given) | 
| 229 | < | { | 
| 230 | < | fprintf (stderr, "%s: `--sele1' option given more than once\n", CMDLINE_PARSER_PACKAGE); | 
| 231 | < | clear_args (); | 
| 232 | < | exit (EXIT_FAILURE); | 
| 233 | < | } | 
| 234 | < | args_info->sele1_given = 1; | 
| 235 | < | args_info->sele1_arg = gengetopt_strdup (optarg); | 
| 236 | < | break; | 
| 237 | < | } | 
| 227 | > | { | 
| 228 | > | if (args_info->sele1_given) | 
| 229 | > | { | 
| 230 | > | fprintf (stderr, "%s: `--sele1' option given more than once\n", CMDLINE_PARSER_PACKAGE); | 
| 231 | > | clear_args (); | 
| 232 | > | exit (EXIT_FAILURE); | 
| 233 | > | } | 
| 234 | > | args_info->sele1_given = 1; | 
| 235 | > | args_info->sele1_arg = gengetopt_strdup (optarg); | 
| 236 | > | break; | 
| 237 | > | } | 
| 238 |  |  | 
| 239 |  | /* select second stuntdouble set.  */ | 
| 240 |  | else if (strcmp (long_options[option_index].name, "sele2") == 0) | 
| 241 | < | { | 
| 242 | < | if (args_info->sele2_given) | 
| 243 | < | { | 
| 244 | < | fprintf (stderr, "%s: `--sele2' option given more than once\n", CMDLINE_PARSER_PACKAGE); | 
| 245 | < | clear_args (); | 
| 246 | < | exit (EXIT_FAILURE); | 
| 247 | < | } | 
| 248 | < | args_info->sele2_given = 1; | 
| 249 | < | args_info->sele2_arg = gengetopt_strdup (optarg); | 
| 250 | < | break; | 
| 251 | < | } | 
| 241 | > | { | 
| 242 | > | if (args_info->sele2_given) | 
| 243 | > | { | 
| 244 | > | fprintf (stderr, "%s: `--sele2' option given more than once\n", CMDLINE_PARSER_PACKAGE); | 
| 245 | > | clear_args (); | 
| 246 | > | exit (EXIT_FAILURE); | 
| 247 | > | } | 
| 248 | > | args_info->sele2_given = 1; | 
| 249 | > | args_info->sele2_arg = gengetopt_strdup (optarg); | 
| 250 | > | break; | 
| 251 | > | } | 
| 252 | > |  | 
| 253 | > | /* select reference (use and only use with --gxyz).  */ | 
| 254 | > | else if (strcmp (long_options[option_index].name, "refsele") == 0) | 
| 255 | > | { | 
| 256 | > | if (args_info->refsele_given) | 
| 257 | > | { | 
| 258 | > | fprintf (stderr, "%s: `--refsele' option given more than once\n", CMDLINE_PARSER_PACKAGE); | 
| 259 | > | clear_args (); | 
| 260 | > | exit (EXIT_FAILURE); | 
| 261 | > | } | 
| 262 | > | args_info->refsele_given = 1; | 
| 263 | > | args_info->refsele_arg = gengetopt_strdup (optarg); | 
| 264 | > | break; | 
| 265 | > | } | 
| 266 |  |  | 
| 267 |  | /* g(r).  */ | 
| 268 |  | else if (strcmp (long_options[option_index].name, "gofr") == 0) | 
| 269 | < | { | 
| 270 | < | if (args_info->gofr_given) | 
| 271 | < | { | 
| 272 | < | fprintf (stderr, "%s: `--gofr' option given more than once\n", CMDLINE_PARSER_PACKAGE); | 
| 273 | < | clear_args (); | 
| 274 | < | exit (EXIT_FAILURE); | 
| 275 | < | } | 
| 276 | < | args_info->gofr_given = 1; staticProps_group_counter += 1; | 
| 269 | > | { | 
| 270 | > | if (args_info->gofr_given) | 
| 271 | > | { | 
| 272 | > | fprintf (stderr, "%s: `--gofr' option given more than once\n", CMDLINE_PARSER_PACKAGE); | 
| 273 | > | clear_args (); | 
| 274 | > | exit (EXIT_FAILURE); | 
| 275 | > | } | 
| 276 | > | args_info->gofr_given = 1; staticProps_group_counter += 1; | 
| 277 |  |  | 
| 278 | < | break; | 
| 279 | < | } | 
| 278 | > | break; | 
| 279 | > | } | 
| 280 |  |  | 
| 281 |  | /* g(r, cos(theta)).  */ | 
| 282 |  | else if (strcmp (long_options[option_index].name, "r_theta") == 0) | 
| 283 | < | { | 
| 284 | < | if (args_info->r_theta_given) | 
| 285 | < | { | 
| 286 | < | fprintf (stderr, "%s: `--r_theta' option given more than once\n", CMDLINE_PARSER_PACKAGE); | 
| 287 | < | clear_args (); | 
| 288 | < | exit (EXIT_FAILURE); | 
| 289 | < | } | 
| 290 | < | args_info->r_theta_given = 1; staticProps_group_counter += 1; | 
| 283 | > | { | 
| 284 | > | if (args_info->r_theta_given) | 
| 285 | > | { | 
| 286 | > | fprintf (stderr, "%s: `--r_theta' option given more than once\n", CMDLINE_PARSER_PACKAGE); | 
| 287 | > | clear_args (); | 
| 288 | > | exit (EXIT_FAILURE); | 
| 289 | > | } | 
| 290 | > | args_info->r_theta_given = 1; staticProps_group_counter += 1; | 
| 291 |  |  | 
| 292 | < | break; | 
| 293 | < | } | 
| 292 | > | break; | 
| 293 | > | } | 
| 294 |  |  | 
| 295 |  | /* g(r, cos(omega)).  */ | 
| 296 |  | else if (strcmp (long_options[option_index].name, "r_omega") == 0) | 
| 297 | < | { | 
| 298 | < | if (args_info->r_omega_given) | 
| 299 | < | { | 
| 300 | < | fprintf (stderr, "%s: `--r_omega' option given more than once\n", CMDLINE_PARSER_PACKAGE); | 
| 301 | < | clear_args (); | 
| 302 | < | exit (EXIT_FAILURE); | 
| 303 | < | } | 
| 304 | < | args_info->r_omega_given = 1; staticProps_group_counter += 1; | 
| 297 | > | { | 
| 298 | > | if (args_info->r_omega_given) | 
| 299 | > | { | 
| 300 | > | fprintf (stderr, "%s: `--r_omega' option given more than once\n", CMDLINE_PARSER_PACKAGE); | 
| 301 | > | clear_args (); | 
| 302 | > | exit (EXIT_FAILURE); | 
| 303 | > | } | 
| 304 | > | args_info->r_omega_given = 1; staticProps_group_counter += 1; | 
| 305 |  |  | 
| 306 | < | break; | 
| 307 | < | } | 
| 306 | > | break; | 
| 307 | > | } | 
| 308 |  |  | 
| 309 |  | /* g(cos(theta), cos(omega)).  */ | 
| 310 |  | else if (strcmp (long_options[option_index].name, "theta_omega") == 0) | 
| 311 | < | { | 
| 312 | < | if (args_info->theta_omega_given) | 
| 313 | < | { | 
| 314 | < | fprintf (stderr, "%s: `--theta_omega' option given more than once\n", CMDLINE_PARSER_PACKAGE); | 
| 315 | < | clear_args (); | 
| 316 | < | exit (EXIT_FAILURE); | 
| 317 | < | } | 
| 318 | < | args_info->theta_omega_given = 1; staticProps_group_counter += 1; | 
| 311 | > | { | 
| 312 | > | if (args_info->theta_omega_given) | 
| 313 | > | { | 
| 314 | > | fprintf (stderr, "%s: `--theta_omega' option given more than once\n", CMDLINE_PARSER_PACKAGE); | 
| 315 | > | clear_args (); | 
| 316 | > | exit (EXIT_FAILURE); | 
| 317 | > | } | 
| 318 | > | args_info->theta_omega_given = 1; staticProps_group_counter += 1; | 
| 319 |  |  | 
| 320 | < | break; | 
| 321 | < | } | 
| 320 | > | break; | 
| 321 | > | } | 
| 322 |  |  | 
| 323 |  | /* g(x, y, z).  */ | 
| 324 | < | else if (strcmp (long_options[option_index].name, "xyz") == 0) | 
| 325 | < | { | 
| 326 | < | if (args_info->xyz_given) | 
| 327 | < | { | 
| 328 | < | fprintf (stderr, "%s: `--xyz' option given more than once\n", CMDLINE_PARSER_PACKAGE); | 
| 329 | < | clear_args (); | 
| 330 | < | exit (EXIT_FAILURE); | 
| 331 | < | } | 
| 332 | < | args_info->xyz_given = 1; staticProps_group_counter += 1; | 
| 324 | > | else if (strcmp (long_options[option_index].name, "gxyz") == 0) | 
| 325 | > | { | 
| 326 | > | if (args_info->gxyz_given) | 
| 327 | > | { | 
| 328 | > | fprintf (stderr, "%s: `--gxyz' option given more than once\n", CMDLINE_PARSER_PACKAGE); | 
| 329 | > | clear_args (); | 
| 330 | > | exit (EXIT_FAILURE); | 
| 331 | > | } | 
| 332 | > | args_info->gxyz_given = 1; staticProps_group_counter += 1; | 
| 333 |  |  | 
| 334 | < | break; | 
| 335 | < | } | 
| 334 | > | break; | 
| 335 | > | } | 
| 336 |  |  | 
| 337 |  |  | 
| 338 |  | case '?':       /* Invalid option.  */ |