--- trunk/src/applications/staticProps/StaticPropsCmd.h	2006/05/22 15:30:42	967
+++ trunk/src/applications/staticProps/StaticPropsCmd.h	2006/09/20 20:13:40	1041
@@ -30,8 +30,8 @@ struct gengetopt_args_info
   char * output_orig;	/* output file name original value given at command line.  */
   int step_arg;	/* process every n frame (default='1').  */
   char * step_orig;	/* process every n frame original value given at command line.  */
-  int nrbins_arg;	/* number of bins for distance (default='100').  */
-  char * nrbins_orig;	/* number of bins for distance original value given at command line.  */
+  int nbins_arg;	/* number of bins (general purpose) (default='100').  */
+  char * nbins_orig;	/* number of bins (general purpose) original value given at command line.  */
   int nbins_x_arg;	/* number of bins in x axis (default='100').  */
   char * nbins_x_orig;	/* number of bins in x axis original value given at command line.  */
   int nbins_y_arg;	/* number of bins in y axis (default='100').  */
@@ -40,6 +40,10 @@ struct gengetopt_args_info
   char * nanglebins_orig;	/* number of bins for cos(angle) original value given at command line.  */
   double length_arg;	/* maximum length (Defaults to 1/2 smallest length of first frame).  */
   char * length_orig;	/* maximum length (Defaults to 1/2 smallest length of first frame) original value given at command line.  */
+  int LegendreL_arg;	/* Order of Legendre Polynomial (used for Bond Order calculations).  */
+  char * LegendreL_orig;	/* Order of Legendre Polynomial (used for Bond Order calculations) original value given at command line.  */
+  double rcut_arg;	/* cutoff radius (rcut).  */
+  char * rcut_orig;	/* cutoff radius (rcut) original value given at command line.  */
   double zoffset_arg;	/* Where to set the zero for the slab_density calculation (default='0').  */
   char * zoffset_orig;	/* Where to set the zero for the slab_density calculation original value given at command line.  */
   char * sele1_arg;	/* select the first stuntdouble set.  */
@@ -52,8 +56,8 @@ struct gengetopt_args_info
   char * refsele_orig;	/* select reference (use and only use with --gxyz) original value given at command line.  */
   char * molname_arg;	/* molecule name.  */
   char * molname_orig;	/* molecule name original value given at command line.  */
-  int begin_arg;	/* begin interanl index.  */
-  char * begin_orig;	/* begin interanl index original value given at command line.  */
+  int begin_arg;	/* begin internal index.  */
+  char * begin_orig;	/* begin internal index original value given at command line.  */
   int end_arg;	/* end internal index.  */
   char * end_orig;	/* end internal index original value given at command line.  */
   
@@ -62,11 +66,13 @@ struct gengetopt_args_info
   int input_given ;	/* Whether input was given.  */
   int output_given ;	/* Whether output was given.  */
   int step_given ;	/* Whether step was given.  */
-  int nrbins_given ;	/* Whether nrbins was given.  */
+  int nbins_given ;	/* Whether nbins was given.  */
   int nbins_x_given ;	/* Whether nbins_x was given.  */
   int nbins_y_given ;	/* Whether nbins_y was given.  */
   int nanglebins_given ;	/* Whether nanglebins was given.  */
   int length_given ;	/* Whether length was given.  */
+  int LegendreL_given ;	/* Whether LegendreL was given.  */
+  int rcut_given ;	/* Whether rcut was given.  */
   int zoffset_given ;	/* Whether zoffset was given.  */
   int sele1_given ;	/* Whether sele1 was given.  */
   int sele2_given ;	/* Whether sele2 was given.  */
@@ -75,12 +81,14 @@ struct gengetopt_args_info
   int molname_given ;	/* Whether molname was given.  */
   int begin_given ;	/* Whether begin was given.  */
   int end_given ;	/* Whether end was given.  */
+  int bo_given ;	/* Whether bo was given.  */
   int gofr_given ;	/* Whether gofr was given.  */
   int r_theta_given ;	/* Whether r_theta was given.  */
   int r_omega_given ;	/* Whether r_omega was given.  */
   int theta_omega_given ;	/* Whether theta_omega was given.  */
   int gxyz_given ;	/* Whether gxyz was given.  */
   int p2_given ;	/* Whether p2 was given.  */
+  int rp2_given ;	/* Whether rp2 was given.  */
   int scd_given ;	/* Whether scd was given.  */
   int density_given ;	/* Whether density was given.  */
   int slab_density_given ;	/* Whether slab_density was given.  */