| 1 | tim | 155 | /* | 
| 2 |  |  | * Copyright (C) 2000-2004  Object Oriented Parallel Simulation Engine (OOPSE) project | 
| 3 |  |  | * | 
| 4 |  |  | * Contact: oopse@oopse.org | 
| 5 |  |  | * | 
| 6 |  |  | * This program is free software; you can redistribute it and/or | 
| 7 |  |  | * modify it under the terms of the GNU Lesser General Public License | 
| 8 |  |  | * as published by the Free Software Foundation; either version 2.1 | 
| 9 |  |  | * of the License, or (at your option) any later version. | 
| 10 |  |  | * All we ask is that proper credit is given for our work, which includes | 
| 11 |  |  | * - but is not limited to - adding the above copyright notice to the beginning | 
| 12 |  |  | * of your source code files, and to any copyright notice that you may distribute | 
| 13 |  |  | * with programs based on this work. | 
| 14 |  |  | * | 
| 15 |  |  | * This program is distributed in the hope that it will be useful, | 
| 16 |  |  | * but WITHOUT ANY WARRANTY; without even the implied warranty of | 
| 17 |  |  | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | 
| 18 |  |  | * GNU Lesser General Public License for more details. | 
| 19 |  |  | * | 
| 20 |  |  | * You should have received a copy of the GNU Lesser General Public License | 
| 21 |  |  | * along with this program; if not, write to the Free Software | 
| 22 |  |  | * Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA  02111-1307, USA. | 
| 23 |  |  | * | 
| 24 |  |  | */ | 
| 25 |  |  |  | 
| 26 |  |  | /** | 
| 27 |  |  | * @file DataStorage.cpp | 
| 28 |  |  | * @author tlin | 
| 29 |  |  | * @date 10/26/2004 | 
| 30 |  |  | * @time 11:56am | 
| 31 |  |  | * @version 1.0 | 
| 32 |  |  | */ | 
| 33 |  |  |  | 
| 34 |  |  | #include "brains/DataStorage.hpp" | 
| 35 |  |  |  | 
| 36 |  |  |  | 
| 37 |  |  | DataStorage::DataStorage() : size_(0), storageLayout_(0){ | 
| 38 |  |  |  | 
| 39 |  |  | } | 
| 40 |  |  |  | 
| 41 |  |  | DataStorage::DataStorage(int size, int storageLayout) : size_(size){ | 
| 42 |  |  | setStorageLayout(storageLayout); | 
| 43 |  |  | resize(size); | 
| 44 |  |  | } | 
| 45 |  |  |  | 
| 46 |  |  | int DataStorage::getSize() { | 
| 47 |  |  |  | 
| 48 |  |  | if (storageLayout_ & dslPosition && position.size() != size_) { | 
| 49 |  |  | //error | 
| 50 |  |  | std::cerr << "size does not match"<< std::endl; | 
| 51 |  |  | } | 
| 52 |  |  |  | 
| 53 |  |  | if (storageLayout_ & dslVelocity && velocity.size() != size_) { | 
| 54 |  |  | //error | 
| 55 |  |  | std::cerr << "size does not match"<< std::endl; | 
| 56 |  |  | } | 
| 57 |  |  |  | 
| 58 |  |  | if (storageLayout_ & dslAmat && aMat.size() != size_) { | 
| 59 |  |  | //error | 
| 60 |  |  | std::cerr << "size does not match"<< std::endl; | 
| 61 |  |  | } | 
| 62 |  |  |  | 
| 63 |  |  | if (storageLayout_ & dslAngularMomentum && angularMomentum.size() != size_) { | 
| 64 |  |  | //error | 
| 65 |  |  | std::cerr << "size does not match"<< std::endl; | 
| 66 |  |  | } | 
| 67 |  |  |  | 
| 68 |  |  | if (storageLayout_ & dslUnitVector && unitVector.size() != size_) { | 
| 69 |  |  | //error | 
| 70 |  |  | std::cerr << "size does not match"<< std::endl; | 
| 71 |  |  | } | 
| 72 |  |  |  | 
| 73 |  |  | if (storageLayout_ & dslZAngle && zAngle.size() != size_) { | 
| 74 |  |  | //error | 
| 75 |  |  | std::cerr << "size does not match"<< std::endl; | 
| 76 |  |  | } | 
| 77 |  |  |  | 
| 78 |  |  | if (storageLayout_ & dslForce && force.size() != size_) { | 
| 79 |  |  | //error | 
| 80 |  |  | std::cerr << "size does not match"<< std::endl; | 
| 81 |  |  | } | 
| 82 |  |  |  | 
| 83 |  |  | if (storageLayout_ & dslTorque && torque.size() != size_) { | 
| 84 |  |  | //error | 
| 85 |  |  | std::cerr << "size does not match"<< std::endl; | 
| 86 |  |  | } | 
| 87 |  |  |  | 
| 88 |  |  | return size_; | 
| 89 |  |  |  | 
| 90 |  |  | } | 
| 91 |  |  |  | 
| 92 |  |  | void DataStorage::resize(int newSize) { | 
| 93 |  |  |  | 
| 94 |  |  | if (storageLayout_ & dslPosition) { | 
| 95 |  |  | internalResize(position, newSize); | 
| 96 |  |  | } | 
| 97 |  |  |  | 
| 98 |  |  | if (storageLayout_ & dslVelocity) { | 
| 99 |  |  | internalResize(velocity, newSize); | 
| 100 |  |  | } | 
| 101 |  |  |  | 
| 102 |  |  | if (storageLayout_ & dslAmat) { | 
| 103 |  |  | internalResize(aMat, newSize); | 
| 104 |  |  | } | 
| 105 |  |  |  | 
| 106 |  |  | if (storageLayout_ & dslAngularMomentum) { | 
| 107 |  |  | internalResize(angularMomentum, newSize); | 
| 108 |  |  | } | 
| 109 |  |  |  | 
| 110 |  |  | if (storageLayout_ & dslUnitVector) { | 
| 111 |  |  | internalResize(unitVector, newSize); | 
| 112 |  |  | } | 
| 113 |  |  |  | 
| 114 |  |  | if (storageLayout_ & dslZAngle) { | 
| 115 |  |  | internalResize(zAngle, newSize); | 
| 116 |  |  | } | 
| 117 |  |  |  | 
| 118 |  |  | if (storageLayout_ & dslForce) { | 
| 119 |  |  | internalResize(force, newSize); | 
| 120 |  |  | } | 
| 121 |  |  |  | 
| 122 |  |  | if (storageLayout_ & dslTorque) { | 
| 123 |  |  | internalResize(torque, newSize); | 
| 124 |  |  | } | 
| 125 |  |  |  | 
| 126 |  |  | size_ = newSize; | 
| 127 |  |  | } | 
| 128 |  |  |  | 
| 129 |  |  | void DataStorage::reserve(int size) { | 
| 130 |  |  | if (storageLayout_ & dslPosition) { | 
| 131 |  |  | position.reserve(size); | 
| 132 |  |  | } | 
| 133 |  |  |  | 
| 134 |  |  | if (storageLayout_ & dslVelocity) { | 
| 135 |  |  | velocity.reserve(size); | 
| 136 |  |  | } | 
| 137 |  |  |  | 
| 138 |  |  | if (storageLayout_ & dslAmat) { | 
| 139 |  |  | aMat.reserve(size); | 
| 140 |  |  | } | 
| 141 |  |  |  | 
| 142 |  |  | if (storageLayout_ & dslAngularMomentum) { | 
| 143 |  |  | angularMomentum.reserve(size); | 
| 144 |  |  | } | 
| 145 |  |  |  | 
| 146 |  |  | if (storageLayout_ & dslUnitVector) { | 
| 147 |  |  | unitVector.reserve(size); | 
| 148 |  |  | } | 
| 149 |  |  |  | 
| 150 |  |  | if (storageLayout_ & dslZAngle) { | 
| 151 |  |  | zAngle.reserve(size); | 
| 152 |  |  | } | 
| 153 |  |  |  | 
| 154 |  |  | if (storageLayout_ & dslForce) { | 
| 155 |  |  | force.reserve(size); | 
| 156 |  |  | } | 
| 157 |  |  |  | 
| 158 |  |  | if (storageLayout_ & dslTorque) { | 
| 159 |  |  | torque.reserve(size); | 
| 160 |  |  | } | 
| 161 |  |  |  | 
| 162 |  |  | } | 
| 163 |  |  |  | 
| 164 |  |  | void DataStorage::copy(int source, int num, int target) { | 
| 165 |  |  | if (num + target > size_ ) { | 
| 166 |  |  | //error | 
| 167 |  |  | } | 
| 168 |  |  |  | 
| 169 |  |  | if (storageLayout_ & dslPosition) { | 
| 170 |  |  | interalCopy(position, source, num, target); | 
| 171 |  |  | } | 
| 172 |  |  |  | 
| 173 |  |  | if (storageLayout_ & dslVelocity) { | 
| 174 |  |  | interalCopy(velocity, source, num, target); | 
| 175 |  |  | } | 
| 176 |  |  |  | 
| 177 |  |  | if (storageLayout_ & dslAmat) { | 
| 178 |  |  | interalCopy(aMat, source, num, target); | 
| 179 |  |  | } | 
| 180 |  |  |  | 
| 181 |  |  | if (storageLayout_ & dslAngularMomentum) { | 
| 182 |  |  | interalCopy(angularMomentum, source, num, target); | 
| 183 |  |  | } | 
| 184 |  |  |  | 
| 185 |  |  | if (storageLayout_ & dslUnitVector) { | 
| 186 |  |  | interalCopy(unitVector, source, num, target); | 
| 187 |  |  | } | 
| 188 |  |  |  | 
| 189 |  |  | if (storageLayout_ & dslZAngle) { | 
| 190 |  |  | interalCopy(zAngle, source, num, target); | 
| 191 |  |  | } | 
| 192 |  |  |  | 
| 193 |  |  | if (storageLayout_ & dslForce) { | 
| 194 |  |  | interalCopy(force, source, num, target); | 
| 195 |  |  | } | 
| 196 |  |  |  | 
| 197 |  |  | if (storageLayout_ & dslTorque) { | 
| 198 |  |  | interalCopy(torque, source, num, target); | 
| 199 |  |  | } | 
| 200 |  |  |  | 
| 201 |  |  |  | 
| 202 |  |  | } | 
| 203 |  |  |  | 
| 204 |  |  | int DataStorage::getStorageLayout() { | 
| 205 |  |  | return storageLayout_; | 
| 206 |  |  | } | 
| 207 |  |  |  | 
| 208 |  |  | void DataStorage::setStorageLayout(int layout) { | 
| 209 |  |  | storageLayout_ = layout; | 
| 210 |  |  | resize(size_); | 
| 211 |  |  | } | 
| 212 |  |  |  | 
| 213 |  |  | double* DataStorage::getArrayPointer(int whichArray) { | 
| 214 |  |  |  | 
| 215 |  |  | switch (whichArray) { | 
| 216 |  |  | case dslPosition: | 
| 217 |  |  | return internalGetArrayPointer(torque); | 
| 218 |  |  | break; | 
| 219 |  |  |  | 
| 220 |  |  | case dslVelocity: | 
| 221 |  |  | return internalGetArrayPointer(velocity); | 
| 222 |  |  | break; | 
| 223 |  |  |  | 
| 224 |  |  | case dslAmat: | 
| 225 |  |  | return internalGetArrayPointer(aMat); | 
| 226 |  |  | break; | 
| 227 |  |  |  | 
| 228 |  |  | case dslAngularMomentum: | 
| 229 |  |  | return internalGetArrayPointer(angularMomentum); | 
| 230 |  |  | break; | 
| 231 |  |  |  | 
| 232 |  |  | case dslUnitVector: | 
| 233 |  |  | return internalGetArrayPointer(unitVector); | 
| 234 |  |  | break; | 
| 235 |  |  |  | 
| 236 |  |  | case dslZAngle: | 
| 237 |  |  | return internalGetArrayPointer(zAngle); | 
| 238 |  |  | break; | 
| 239 |  |  |  | 
| 240 |  |  | case dslForce: | 
| 241 |  |  | return internalGetArrayPointer(force); | 
| 242 |  |  | break; | 
| 243 |  |  |  | 
| 244 |  |  | case dslTorque: | 
| 245 |  |  | return internalGetArrayPointer(torque); | 
| 246 |  |  | break; | 
| 247 |  |  |  | 
| 248 |  |  | default: | 
| 249 |  |  | //error message | 
| 250 |  |  | return NULL; | 
| 251 |  |  |  | 
| 252 |  |  | } | 
| 253 |  |  | } | 
| 254 |  |  |  | 
| 255 |  |  | double* DataStorage::internalGetArrayPointer(std::vector<Vector3d>& v) { | 
| 256 |  |  | if (v.size() == 0) { | 
| 257 |  |  | return NULL; | 
| 258 |  |  | } else { | 
| 259 |  |  | return v[0].getArrayPointer(); | 
| 260 |  |  | } | 
| 261 |  |  | } | 
| 262 |  |  |  | 
| 263 |  |  | double* DataStorage::internalGetArrayPointer(std::vector<RotMat3x3d>& v) { | 
| 264 |  |  | if (v.size() == 0) { | 
| 265 |  |  | return NULL; | 
| 266 |  |  | } else { | 
| 267 |  |  | return v[0].getArrayPointer(); | 
| 268 |  |  | } | 
| 269 |  |  |  | 
| 270 |  |  | } | 
| 271 |  |  |  | 
| 272 |  |  | double* DataStorage::internalGetArrayPointer(std::vector<double>& v) { | 
| 273 |  |  | if (v.size() == 0) { | 
| 274 |  |  | return NULL; | 
| 275 |  |  | } else { | 
| 276 |  |  | return &(v[0]); | 
| 277 |  |  | } | 
| 278 |  |  |  | 
| 279 |  |  | } | 
| 280 |  |  |  | 
| 281 |  |  | template<typename T> | 
| 282 |  |  | void DataStorage::internalResize(std::vector<T>& v, int newSize){ | 
| 283 |  |  | int oldSize = v.size(); | 
| 284 |  |  |  | 
| 285 |  |  | if (oldSize == newSize) { | 
| 286 |  |  | return; | 
| 287 |  |  | } else if (oldSize < newSize) { | 
| 288 |  |  | v.insert(v.end(), newSize-oldSize, T()); | 
| 289 |  |  | } else { | 
| 290 |  |  | typename std::vector<T>::iterator i; | 
| 291 |  |  | i = v.begin(); | 
| 292 |  |  | std::advance(i, newSize); | 
| 293 |  |  | v.erase(i, v.end()); | 
| 294 |  |  | } | 
| 295 |  |  | } | 
| 296 |  |  |  | 
| 297 |  |  | template<typename T> | 
| 298 |  |  | void DataStorage::interalCopy(std::vector<T>& v, int source,  int num, int target) { | 
| 299 |  |  | typename std::vector<T>::iterator first; | 
| 300 |  |  | typename std::vector<T>::iterator last; | 
| 301 |  |  | typename std::vector<T>::iterator result; | 
| 302 |  |  |  | 
| 303 |  |  | first = v.begin(); | 
| 304 |  |  | last = v.begin(); | 
| 305 |  |  | result = v.begin(); | 
| 306 |  |  |  | 
| 307 |  |  | std::advance(first, source); | 
| 308 |  |  | //STL algorithm use half opened range | 
| 309 |  |  | std::advance(last, num + 1); | 
| 310 |  |  | std::advance(result, target ); | 
| 311 |  |  |  | 
| 312 |  |  | std::copy(first, last, result); | 
| 313 |  |  | } |