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root/OpenMD/trunk/src/brains/DataStorage.cpp
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Comparing trunk/src/brains/DataStorage.cpp (file contents):
Revision 1879 by gezelter, Sun Jun 16 15:15:42 2013 UTC vs.
Revision 1993 by gezelter, Tue Apr 29 17:32:31 2014 UTC

# Line 146 | Line 146 | namespace OpenMD {
146        //error
147        cerr << "size does not match"<< endl;        
148      }
149 +
150 +    if (storageLayout_ & dslSitePotential && sitePotential.size() != size_) {
151 +      //error
152 +      cerr << "size does not match"<< endl;        
153 +    }
154      
155      return size_;
156  
# Line 221 | Line 226 | namespace OpenMD {
226        internalResize(flucQFrc, newSize);
227      }
228  
229 +    if (storageLayout_ & dslSitePotential) {
230 +      internalResize(sitePotential, newSize);
231 +    }
232 +
233      size_ = newSize;
234    }
235  
# Line 292 | Line 301 | namespace OpenMD {
301      if (storageLayout_ & dslFlucQForce) {
302        flucQFrc.reserve(size);
303      }
304 +
305 +    if (storageLayout_ & dslSitePotential) {
306 +      sitePotential.reserve(size);
307 +    }
308    }
309  
310    void DataStorage::copy(int source, int num, int target) {
# Line 365 | Line 378 | namespace OpenMD {
378      if (storageLayout_ & dslFlucQForce) {
379        internalCopy(flucQFrc, source, num, target);
380      }
381 +
382 +    if (storageLayout_ & dslSitePotential) {
383 +      internalCopy(sitePotential, source, num, target);
384 +    }
385    }
386  
387    int DataStorage::getStorageLayout() {
# Line 430 | Line 447 | namespace OpenMD {
447      case dslFlucQForce:
448        return internalGetArrayPointer(flucQFrc);
449            
450 +    case dslSitePotential:
451 +      return internalGetArrayPointer(sitePotential);
452 +          
453      default:
454        //error message
455        return NULL;
# Line 549 | Line 569 | namespace OpenMD {
569      if (layout & dslFlucQForce) {
570        bytes += sizeof(RealType);
571      }
572 +    if (layout & dslSitePotential) {
573 +      bytes += sizeof(RealType);
574 +    }
575  
576      return bytes;
577    }

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