| 50 |
|
#ifndef USETHEFORCE_FORCEFIELD_HPP |
| 51 |
|
#define USETHEFORCE_FORCEFIELD_HPP |
| 52 |
|
|
| 53 |
< |
#define MK_STR(s) # s |
| 54 |
< |
#define STR_DEFINE(t, s) t = MK_STR(s) |
| 55 |
< |
|
| 53 |
> |
#include "config.h" |
| 54 |
|
#include <string> |
| 55 |
|
#include <utility> |
| 56 |
|
|
| 57 |
|
#include "io/basic_ifstrstream.hpp" |
| 58 |
+ |
#include "io/ForceFieldOptions.hpp" |
| 59 |
|
#include "utils/TypeContainer.hpp" |
| 60 |
|
#include "types/AtomType.hpp" |
| 61 |
|
#include "types/BondType.hpp" |
| 94 |
|
AtomType* getAtomType(const std::string &at); |
| 95 |
|
BondType* getBondType(const std::string &at1, const std::string &at2); |
| 96 |
|
BendType* getBendType(const std::string &at1, const std::string &at2, |
| 97 |
< |
const std::string &at3); |
| 97 |
> |
const std::string &at3); |
| 98 |
|
TorsionType* getTorsionType(const std::string &at1, const std::string &at2, |
| 99 |
< |
const std::string &at3, const std::string &at4); |
| 99 |
> |
const std::string &at3, const std::string &at4); |
| 100 |
|
|
| 101 |
|
BondType* getExactBondType(const std::string &at1, const std::string &at2); |
| 102 |
|
BendType* getExactBendType(const std::string &at1, const std::string &at2, |
| 103 |
< |
const std::string &at3); |
| 104 |
< |
TorsionType* getExactTorsionType(const std::string &at1, const std::string &at2, |
| 105 |
< |
const std::string &at3, const std::string &at4); |
| 103 |
> |
const std::string &at3); |
| 104 |
> |
TorsionType* getExactTorsionType(const std::string &at1, |
| 105 |
> |
const std::string &at2, |
| 106 |
> |
const std::string &at3, |
| 107 |
> |
const std::string &at4); |
| 108 |
|
|
| 109 |
|
|
| 110 |
|
//avoid make virtual function public |
| 126 |
|
|
| 127 |
|
bool addAtomType(const std::string &at, AtomType* atomType); |
| 128 |
|
|
| 129 |
< |
bool addBondType(const std::string &at1, const std::string &at2, BondType* bondType); |
| 129 |
> |
bool addBondType(const std::string &at1, const std::string &at2, |
| 130 |
> |
BondType* bondType); |
| 131 |
|
|
| 132 |
|
bool addBendType(const std::string &at1, const std::string &at2, |
| 133 |
|
const std::string &at3, BendType* bendType); |
| 137 |
|
|
| 138 |
|
ifstrstream* openForceFieldFile(const std::string& filename); |
| 139 |
|
|
| 140 |
+ |
ForceFieldOptions& getForceFieldOptions() {return forceFieldOptions_;} |
| 141 |
|
protected: |
| 142 |
|
|
| 143 |
|
AtomTypeContainer atomTypeCont_; |
| 144 |
|
BondTypeContainer bondTypeCont_; |
| 145 |
|
BendTypeContainer bendTypeCont_; |
| 146 |
|
TorsionTypeContainer torsionTypeCont_; |
| 147 |
< |
|
| 147 |
> |
ForceFieldOptions forceFieldOptions_; |
| 148 |
> |
|
| 149 |
|
private: |
| 150 |
|
std::string ffPath_; |
| 151 |
|
|