| 51 |
|
#include "integrators/NPTxyz.hpp" |
| 52 |
|
#include "integrators/NPAT.hpp" |
| 53 |
|
#include "integrators/NPrT.hpp" |
| 54 |
+ |
#include "integrators/NgammaT.hpp" |
| 55 |
|
#include "integrators/LangevinDynamics.hpp" |
| 56 |
|
|
| 57 |
|
#include "minimizers/MinimizerFactory.hpp" |
| 64 |
|
#include "UseTheForce/ForceFieldCreator.hpp" |
| 65 |
|
#include "UseTheForce/SHAPES_FF.hpp" |
| 66 |
|
#include "UseTheForce/SC_FF.hpp" |
| 67 |
+ |
#include "UseTheForce/MnM_FF.hpp" |
| 68 |
|
#include "UseTheForce/CLAYFF.hpp" |
| 69 |
|
#include "lattice/LatticeFactory.hpp" |
| 70 |
|
#include "lattice/LatticeCreator.hpp" |
| 77 |
|
#include "openbabel/pdbformat.hpp" |
| 78 |
|
//#include "openbabel/povrayformat.hpp" |
| 79 |
|
//#include "openbabel/smilesformat.hpp" |
| 80 |
< |
#include "openbabel/tinkerformat.hpp" |
| 80 |
> |
//#include "openbabel/tinkerformat.hpp" |
| 81 |
|
#include "openbabel/xyzformat.hpp" |
| 82 |
|
|
| 83 |
|
|
| 96 |
|
ForceFieldFactory::getInstance()->registerForceField(new ForceFieldBuilder<SHAPES_FF>("SHAPES")); |
| 97 |
|
//Well if EAM worked... then Sutton-Chen should work like a CHARMM(Hopefully not). |
| 98 |
|
ForceFieldFactory::getInstance()->registerForceField(new ForceFieldBuilder<SC_FF>("SC")); |
| 99 |
+ |
//Well if Sutton-Chen worked... then lets just mangle all of the forcefields together in MnM. |
| 100 |
+ |
//That sounds like a good idea right...... |
| 101 |
+ |
ForceFieldFactory::getInstance()->registerForceField(new ForceFieldBuilder<MnM_FF>("MnM")); |
| 102 |
|
ForceFieldFactory::getInstance()->registerForceField(new ForceFieldBuilder<CLAYFF>("CLAY")); |
| 103 |
|
} |
| 104 |
|
|
| 111 |
|
IntegratorFactory::getInstance()->registerIntegrator(new IntegratorBuilder<NPAT>("NPAT")); |
| 112 |
|
IntegratorFactory::getInstance()->registerIntegrator(new IntegratorBuilder<NPrT>("NPRT")); |
| 113 |
|
IntegratorFactory::getInstance()->registerIntegrator(new IntegratorBuilder<NPrT>("NPGT")); |
| 114 |
+ |
IntegratorFactory::getInstance()->registerIntegrator(new IntegratorBuilder<NgammaT>("NGT")); |
| 115 |
+ |
IntegratorFactory::getInstance()->registerIntegrator(new IntegratorBuilder<NgammaT>("NGAMMAT")); |
| 116 |
|
IntegratorFactory::getInstance()->registerIntegrator(new IntegratorBuilder<LangevinDynamics>("LANGEVINDYNAMICS")); |
| 117 |
|
IntegratorFactory::getInstance()->registerIntegrator(new IntegratorBuilder<LangevinDynamics>("LD")); |
| 118 |
|
|
| 135 |
|
static OpenBabel::PDBFormat pdbFormatInstance; |
| 136 |
|
//static OpenBabel::PovrayFormat povaryFormatInstance; |
| 137 |
|
//static OpenBabel::SMIFormat smilesFormatInstance; |
| 138 |
< |
static OpenBabel::TinkerFormat tinkerFormatInstance; |
| 138 |
> |
//static OpenBabel::TinkerFormat tinkerFormatInstance; |
| 139 |
|
static OpenBabel::XYZFormat xyzFormatInstance; |
| 140 |
|
} |
| 141 |
|
|