| 69 |
|
public: |
| 70 |
|
|
| 71 |
|
Snapshot(int nAtoms, int nRigidbodies) : atomData(nAtoms), rigidbodyData(nRigidbodies), |
| 72 |
< |
currentTime_(0), orthoRhombic_(0), chi_(0.0), integralOfChiDt_(0.0), eta_(0.0), id_(-1) { |
| 72 |
> |
currentTime_(0), orthoTolerance_(1e-6), orthoRhombic_(0), chi_(0.0), integralOfChiDt_(0.0), eta_(0.0), id_(-1) { |
| 73 |
|
|
| 74 |
|
} |
| 75 |
|
|
| 76 |
|
Snapshot(int nAtoms, int nRigidbodies, int storageLayout) |
| 77 |
|
: atomData(nAtoms, storageLayout), rigidbodyData(nRigidbodies, storageLayout), |
| 78 |
< |
currentTime_(0), orthoRhombic_(0), chi_(0.0), integralOfChiDt_(0.0), eta_(0.0), id_(-1) { |
| 78 |
> |
currentTime_(0), orthoTolerance_(1e-6), orthoRhombic_(0), chi_(0.0), integralOfChiDt_(0.0), eta_(0.0), id_(-1) { |
| 79 |
|
|
| 80 |
|
} |
| 81 |
|
|
| 154 |
|
integralOfChiDt_ = integralOfChiDt; |
| 155 |
|
} |
| 156 |
|
|
| 157 |
+ |
|
| 158 |
+ |
void setOrthoTolerance(RealType orthoTolerance) { |
| 159 |
+ |
orthoTolerance_ = orthoTolerance; |
| 160 |
+ |
} |
| 161 |
+ |
|
| 162 |
|
Mat3x3d getEta() { |
| 163 |
|
return eta_; |
| 164 |
|
} |
| 176 |
|
|
| 177 |
|
Mat3x3d hmat_; |
| 178 |
|
Mat3x3d invHmat_; |
| 179 |
+ |
RealType orthoTolerance_; |
| 180 |
|
int orthoRhombic_; |
| 181 |
|
|
| 182 |
|
RealType chi_; |