| 1 |  | /* | 
| 2 | < | * Copyright (C) 2000-2004  Object Oriented Parallel Simulation Engine (OOPSE) project | 
| 3 | < | * | 
| 4 | < | * Contact: oopse@oopse.org | 
| 5 | < | * | 
| 6 | < | * This program is free software; you can redistribute it and/or | 
| 7 | < | * modify it under the terms of the GNU Lesser General Public License | 
| 8 | < | * as published by the Free Software Foundation; either version 2.1 | 
| 9 | < | * of the License, or (at your option) any later version. | 
| 10 | < | * All we ask is that proper credit is given for our work, which includes | 
| 11 | < | * - but is not limited to - adding the above copyright notice to the beginning | 
| 12 | < | * of your source code files, and to any copyright notice that you may distribute | 
| 13 | < | * with programs based on this work. | 
| 14 | < | * | 
| 15 | < | * This program is distributed in the hope that it will be useful, | 
| 16 | < | * but WITHOUT ANY WARRANTY; without even the implied warranty of | 
| 17 | < | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | 
| 18 | < | * GNU Lesser General Public License for more details. | 
| 19 | < | * | 
| 20 | < | * You should have received a copy of the GNU Lesser General Public License | 
| 21 | < | * along with this program; if not, write to the Free Software | 
| 22 | < | * Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA  02111-1307, USA. | 
| 2 | > | * Copyright (c) 2005 The University of Notre Dame. All Rights Reserved. | 
| 3 |  | * | 
| 4 | + | * The University of Notre Dame grants you ("Licensee") a | 
| 5 | + | * non-exclusive, royalty free, license to use, modify and | 
| 6 | + | * redistribute this software in source and binary code form, provided | 
| 7 | + | * that the following conditions are met: | 
| 8 | + | * | 
| 9 | + | * 1. Redistributions of source code must retain the above copyright | 
| 10 | + | *    notice, this list of conditions and the following disclaimer. | 
| 11 | + | * | 
| 12 | + | * 2. Redistributions in binary form must reproduce the above copyright | 
| 13 | + | *    notice, this list of conditions and the following disclaimer in the | 
| 14 | + | *    documentation and/or other materials provided with the | 
| 15 | + | *    distribution. | 
| 16 | + | * | 
| 17 | + | * This software is provided "AS IS," without a warranty of any | 
| 18 | + | * kind. All express or implied conditions, representations and | 
| 19 | + | * warranties, including any implied warranty of merchantability, | 
| 20 | + | * fitness for a particular purpose or non-infringement, are hereby | 
| 21 | + | * excluded.  The University of Notre Dame and its licensors shall not | 
| 22 | + | * be liable for any damages suffered by licensee as a result of | 
| 23 | + | * using, modifying or distributing the software or its | 
| 24 | + | * derivatives. In no event will the University of Notre Dame or its | 
| 25 | + | * licensors be liable for any lost revenue, profit or data, or for | 
| 26 | + | * direct, indirect, special, consequential, incidental or punitive | 
| 27 | + | * damages, however caused and regardless of the theory of liability, | 
| 28 | + | * arising out of the use of or inability to use software, even if the | 
| 29 | + | * University of Notre Dame has been advised of the possibility of | 
| 30 | + | * such damages. | 
| 31 | + | * | 
| 32 | + | * SUPPORT OPEN SCIENCE!  If you use OpenMD or its source code in your | 
| 33 | + | * research, please cite the appropriate papers when you publish your | 
| 34 | + | * work.  Good starting points are: | 
| 35 | + | * | 
| 36 | + | * [1]  Meineke, et al., J. Comp. Chem. 26, 252-271 (2005). | 
| 37 | + | * [2]  Fennell & Gezelter, J. Chem. Phys. 124, 234104 (2006). | 
| 38 | + | * [3]  Sun, Lin & Gezelter, J. Chem. Phys. 128, 24107 (2008). | 
| 39 | + | * [4]  Kuang & Gezelter,  J. Chem. Phys. 133, 164101 (2010). | 
| 40 | + | * [5]  Vardeman, Stocker & Gezelter, J. Chem. Theory Comput. 7, 834 (2011). | 
| 41 |  | */ | 
| 42 | < |  | 
| 43 | < | /** | 
| 44 | < | * @file SnapshotManager.hpp | 
| 45 | < | * @author tlin | 
| 46 | < | * @date 10/20/2004 | 
| 47 | < | * @time 23:56am | 
| 48 | < | * @version 1.0 | 
| 49 | < | */ | 
| 42 | > |  | 
| 43 | > | /** | 
| 44 | > | * @file SnapshotManager.hpp | 
| 45 | > | * @author tlin | 
| 46 | > | * @date 10/20/2004 | 
| 47 | > | * @time 23:56am | 
| 48 | > | * @version 1.0 | 
| 49 | > | */ | 
| 50 |  | #ifndef BRAINS_SNAPSHOTMANAGER_HPP | 
| 51 |  | #define BRAINS_SNAPSHOTMANAGER_HPP | 
| 35 | – | namespace oopse{ | 
| 52 |  |  | 
| 53 | + | #include "brains/Snapshot.hpp" | 
| 54 | + |  | 
| 55 | + | namespace OpenMD{ | 
| 56 | + |  | 
| 57 | + | /** | 
| 58 | + | * @class SnapshotManager SnapshotManager.hpp "brains/SnapshotManager.hpp" | 
| 59 | + | * @brief SnapshotManager class is an abstract class which maintains | 
| 60 | + | * a series of snapshots. | 
| 61 | + | * | 
| 62 | + | * @see SimSnapshotManager | 
| 63 | + | * @see PropSnapshotManager | 
| 64 | + | */ | 
| 65 | + | class SnapshotManager { | 
| 66 | + | public: | 
| 67 | + |  | 
| 68 | + | virtual ~SnapshotManager() { | 
| 69 | + | delete currentSnapshot_; | 
| 70 | + | delete previousSnapshot_; | 
| 71 | + | } | 
| 72 | + |  | 
| 73 | + | virtual bool advance() { return true; } | 
| 74 | + |  | 
| 75 | + | virtual Snapshot* getSnapshot(int id) = 0; | 
| 76 | + |  | 
| 77 |  | /** | 
| 78 | < | * @class SnapshotManager SnapshotManager.hpp "brains/SnapshotManager.hpp" | 
| 79 | < | * @brief | 
| 78 | > | * Returns the pointer of previous snapshot | 
| 79 | > | * @return the pointer of previous snapshot | 
| 80 |  | */ | 
| 81 | < | class SnapshotManager { | 
| 82 | < | public: | 
| 81 | > | Snapshot* getPrevSnapshot() { | 
| 82 | > | return previousSnapshot_; | 
| 83 | > | } | 
| 84 |  |  | 
| 85 | < | bool forward(); | 
| 85 | > | /** | 
| 86 | > | * Returns the pointer of current snapshot | 
| 87 | > | * @return the pointer of current snapshot | 
| 88 | > | */ | 
| 89 | > | Snapshot* getCurrentSnapshot() { | 
| 90 | > | return currentSnapshot_; | 
| 91 | > | } | 
| 92 |  |  | 
| 93 | < | bool backward(); | 
| 93 | > | int getStorageLayout() { | 
| 94 | > | return storageLayout_; | 
| 95 | > | } | 
| 96 |  |  | 
| 97 | < | bool move(int ); | 
| 97 | > | private: | 
| 98 | > | int storageLayout_; | 
| 99 |  |  | 
| 100 | < | getActiveFrame(); | 
| 100 | > | protected: | 
| 101 |  |  | 
| 102 | < | setActiveFrame(); | 
| 102 | > | SnapshotManager(int storageLayout) : storageLayout_(storageLayout), currentSnapshot_(NULL), previousSnapshot_(NULL) { | 
| 103 | > | } | 
| 104 |  |  | 
| 105 | < | int getCapacity(); | 
| 105 | > | Snapshot* currentSnapshot_; | 
| 106 | > | Snapshot* previousSnapshot_; | 
| 107 | > |  | 
| 108 |  |  | 
| 109 | < | void setCapacity(); | 
| 57 | < | private: | 
| 58 | < | vector<Snapshot*> snapshots_; | 
| 59 | < | }; | 
| 109 | > | }; | 
| 110 |  |  | 
| 111 |  | } | 
| 112 |  | #endif //BRAINS_SNAPSHOTMANAGER_HPP |