| 35 |
|
* |
| 36 |
|
* [1] Meineke, et al., J. Comp. Chem. 26, 252-271 (2005). |
| 37 |
|
* [2] Fennell & Gezelter, J. Chem. Phys. 124, 234104 (2006). |
| 38 |
< |
* [3] Sun, Lin & Gezelter, J. Chem. Phys. 128, 24107 (2008). |
| 39 |
< |
* [4] Vardeman & Gezelter, in progress (2009). |
| 38 |
> |
* [3] Sun, Lin & Gezelter, J. Chem. Phys. 128, 234107 (2008). |
| 39 |
> |
* [4] Kuang & Gezelter, J. Chem. Phys. 133, 164101 (2010). |
| 40 |
> |
* [5] Vardeman, Stocker & Gezelter, J. Chem. Theory Comput. 7, 834 (2011). |
| 41 |
|
*/ |
| 42 |
|
|
| 43 |
|
#ifndef CONSTRAINTS_RATTLE_HPP |
| 45 |
|
|
| 46 |
|
#include "brains/SimInfo.hpp" |
| 47 |
|
#include "constraints/ConstraintPair.hpp" |
| 48 |
+ |
#include "io/ConstraintWriter.hpp" |
| 49 |
+ |
|
| 50 |
|
namespace OpenMD { |
| 51 |
|
|
| 52 |
|
/** |
| 56 |
|
class Rattle { |
| 57 |
|
public: |
| 58 |
|
enum ConsStatus{ |
| 59 |
< |
consFail = -1, //Constraint Fail |
| 60 |
< |
consSuccess = 0, //constrain the pair by moving two elements |
| 61 |
< |
consAlready = 1}; //current pair is already constrained, do not need to move the elements |
| 59 |
> |
consFail = -1, //Constraint Fail |
| 60 |
> |
consSuccess = 0, //constrain the pair by moving two elements |
| 61 |
> |
consAlready = 1 //current pair is already constrained, do not need to move the elements |
| 62 |
> |
}; |
| 63 |
|
|
| 64 |
|
Rattle(SimInfo* info); |
| 65 |
|
void constraintA(); |
| 81 |
|
int maxConsIteration_; |
| 82 |
|
RealType consTolerance_; |
| 83 |
|
RealType dt_; |
| 84 |
< |
Snapshot* currentSnapshot_; |
| 84 |
> |
Snapshot* currentSnapshot_; |
| 85 |
> |
bool doRattle_; |
| 86 |
> |
std::string constraintOutputFile_; |
| 87 |
> |
ConstraintWriter* constraintWriter_; |
| 88 |
> |
RealType constraintTime_; |
| 89 |
> |
RealType currConstraintTime_; |
| 90 |
|
}; |
| 82 |
– |
|
| 91 |
|
} |
| 92 |
|
#endif |