Removing vestiges of deprecated MPI:: namespace C++ MPI bindings
Fixed a few MPI issues that were triggered in mpich.
Fixes to deal with deprecation of MPI C++ bindings. We've reverted back to the C calls.
Some MPI include re-ordering to work with the Intel MPI implementation.
MERGE OpenMD development 1783:1878 into trunk
MERGE OpenMD development branch 1465:1781 into trunk
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