| 92 |
|
void NPTi::getPosScale(const Vector3d& pos, const Vector3d& COM, |
| 93 |
|
int index, Vector3d& sc){ |
| 94 |
|
/**@todo*/ |
| 95 |
< |
sc = (oldPos[index] + pos)/2.0 -COM; |
| 95 |
> |
sc = (oldPos[index] + pos)/(RealType)2.0 -COM; |
| 96 |
|
sc *= eta; |
| 97 |
|
} |
| 98 |
|
|
| 99 |
|
void NPTi::scaleSimBox(){ |
| 100 |
|
|
| 101 |
< |
double scaleFactor; |
| 101 |
> |
RealType scaleFactor; |
| 102 |
|
|
| 103 |
|
scaleFactor = exp(dt*eta); |
| 104 |
|
|
| 123 |
|
return ( fabs(prevEta - eta) <= etaTolerance ); |
| 124 |
|
} |
| 125 |
|
|
| 126 |
< |
double NPTi::calcConservedQuantity(){ |
| 126 |
> |
RealType NPTi::calcConservedQuantity(){ |
| 127 |
|
|
| 128 |
|
chi= currentSnapshot_->getChi(); |
| 129 |
|
integralOfChidt = currentSnapshot_->getIntegralOfChiDt(); |
| 138 |
|
// of freedom). |
| 139 |
|
fkBT = info_->getNdf()*OOPSEConstant::kB *targetTemp; |
| 140 |
|
|
| 141 |
< |
double conservedQuantity; |
| 142 |
< |
double Energy; |
| 143 |
< |
double thermostat_kinetic; |
| 144 |
< |
double thermostat_potential; |
| 145 |
< |
double barostat_kinetic; |
| 146 |
< |
double barostat_potential; |
| 141 |
> |
RealType conservedQuantity; |
| 142 |
> |
RealType Energy; |
| 143 |
> |
RealType thermostat_kinetic; |
| 144 |
> |
RealType thermostat_potential; |
| 145 |
> |
RealType barostat_kinetic; |
| 146 |
> |
RealType barostat_potential; |
| 147 |
|
|
| 148 |
|
Energy =thermo.getTotalE(); |
| 149 |
|
|
| 181 |
|
etaMat(2, 2) = eta; |
| 182 |
|
currentSnapshot_->setEta(etaMat); |
| 183 |
|
} |
| 184 |
– |
|
| 184 |
|
} |