--- trunk/src/io/DumpWriter.cpp 2014/02/20 16:27:30 1968 +++ trunk/src/io/DumpWriter.cpp 2014/02/26 14:14:50 1969 @@ -304,7 +304,7 @@ namespace OpenMD { void DumpWriter::writeFrame(std::ostream& os) { #ifdef IS_MPI - MPI::Status istatus; + MPI_Status* istatus; #endif Molecule* mol; @@ -362,9 +362,13 @@ namespace OpenMD { #else const int masterNode = 0; - int worldRank = MPI::COMM_WORLD.Get_rank(); - int nProc = MPI::COMM_WORLD.Get_size(); + int worldRank; + int nProc; + + MPI_Comm_size( MPI_COMM_WORLD, &nProc); + MPI_Comm_rank( MPI_COMM_WORLD, &worldRank); + if (worldRank == masterNode) { os << " \n"; writeFrameProperties(os, @@ -387,21 +391,21 @@ namespace OpenMD { for (int i = 1; i < nProc; ++i) { // tell processor i to start sending us data: - MPI::COMM_WORLD.Bcast(&i, 1, MPI::INT, masterNode); + MPI_Bcast(&i, 1, MPI_INT, masterNode, MPI_COMM_WORLD); // receive the length of the string buffer that was // prepared by processor i: int recvLength; - MPI::COMM_WORLD.Recv(&recvLength, 1, MPI::INT, i, MPI::ANY_TAG, - istatus); + MPI_Recv(&recvLength, 1, MPI_INT, i, MPI_ANY_TAG, MPI_COMM_WORLD, + istatus); // create a buffer to receive the data char* recvBuffer = new char[recvLength]; if (recvBuffer == NULL) { } else { // receive the data: - MPI::COMM_WORLD.Recv(recvBuffer, recvLength, MPI::CHAR, i, - MPI::ANY_TAG, istatus); + MPI_Recv(recvBuffer, recvLength, MPI_CHAR, i, + MPI_ANY_TAG, MPI_COMM_WORLD, istatus); // send it to the file: os << recvBuffer; // get rid of the receive buffer: @@ -413,14 +417,14 @@ namespace OpenMD { int myturn = 0; for (int i = 1; i < nProc; ++i){ // wait for the master node to call our number: - MPI::COMM_WORLD.Bcast(&myturn, 1, MPI::INT, masterNode); + MPI_Bcast(&myturn, 1, MPI_INT, masterNode, MPI_COMM_WORLD); if (myturn == worldRank){ // send the length of our buffer: - MPI::COMM_WORLD.Send(&sendBufferLength, 1, MPI::INT, masterNode, 0); + MPI_Send(&sendBufferLength, 1, MPI_INT, masterNode, 0, MPI_COMM_WORLD); // send our buffer: - MPI::COMM_WORLD.Send((void *)buffer.c_str(), sendBufferLength, - MPI::CHAR, masterNode, 0); + MPI_Send((void *)buffer.c_str(), sendBufferLength, + MPI_CHAR, masterNode, 0, MPI_COMM_WORLD); } } @@ -464,21 +468,21 @@ namespace OpenMD { for (int i = 1; i < nProc; ++i) { // tell processor i to start sending us data: - MPI::COMM_WORLD.Bcast(&i, 1, MPI::INT, masterNode); + MPI_Bcast(&i, 1, MPI_INT, masterNode, MPI_COMM_WORLD); // receive the length of the string buffer that was // prepared by processor i: int recvLength; - MPI::COMM_WORLD.Recv(&recvLength, 1, MPI::INT, i, MPI::ANY_TAG, - istatus); + MPI_Recv(&recvLength, 1, MPI_INT, i, MPI_ANY_TAG, MPI_COMM_WORLD, + istatus); // create a buffer to receive the data char* recvBuffer = new char[recvLength]; if (recvBuffer == NULL) { } else { // receive the data: - MPI::COMM_WORLD.Recv(recvBuffer, recvLength, MPI::CHAR, i, - MPI::ANY_TAG, istatus); + MPI_Recv(recvBuffer, recvLength, MPI_CHAR, i, + MPI_ANY_TAG, MPI_COMM_WORLD, istatus); // send it to the file: os << recvBuffer; // get rid of the receive buffer: @@ -490,13 +494,13 @@ namespace OpenMD { int myturn = 0; for (int i = 1; i < nProc; ++i){ // wait for the master node to call our number: - MPI::COMM_WORLD.Bcast(&myturn, 1, MPI::INT, masterNode); + MPI_Bcast(&myturn, 1, MPI_INT, masterNode, MPI_COMM_WORLD); if (myturn == worldRank){ // send the length of our buffer: - MPI::COMM_WORLD.Send(&sendBufferLength, 1, MPI::INT, masterNode, 0); + MPI_Send(&sendBufferLength, 1, MPI_INT, masterNode, 0, MPI_COMM_WORLD); // send our buffer: - MPI::COMM_WORLD.Send((void *)buffer.c_str(), sendBufferLength, - MPI::CHAR, masterNode, 0); + MPI_Send((void *)buffer.c_str(), sendBufferLength, + MPI_CHAR, masterNode, 0, MPI_COMM_WORLD); } } } @@ -767,20 +771,15 @@ namespace OpenMD { #ifdef IS_MPI if (worldRank == 0) { #endif // is_mpi - buffers.push_back(dumpFile_->rdbuf()); - eorStream = createOStream(eorFilename_); - buffers.push_back(eorStream->rdbuf()); - #ifdef IS_MPI } #endif // is_mpi TeeBuf tbuf(buffers.begin(), buffers.end()); std::ostream os(&tbuf); - writeFrame(os); #ifdef IS_MPI @@ -790,8 +789,7 @@ namespace OpenMD { delete eorStream; #ifdef IS_MPI } -#endif // is_mpi - +#endif // is_mpi } std::ostream* DumpWriter::createOStream(const std::string& filename) {