| 38 |
|
* University of Notre Dame has been advised of the possibility of |
| 39 |
|
* such damages. |
| 40 |
|
*/ |
| 41 |
< |
#define __C |
| 41 |
> |
#define __OOPSE_C |
| 42 |
|
#include "io/ForceFieldOptions.hpp" |
| 43 |
|
|
| 44 |
|
namespace oopse { |
| 45 |
|
|
| 46 |
|
ForceFieldOptions::ForceFieldOptions() { |
| 47 |
|
DefineOptionalParameter(Name, "Name"); |
| 48 |
+ |
DefineOptionalParameter(CutoffPolicy, "cutoffPolicy"); |
| 49 |
|
DefineOptionalParameterWithDefaultValue(vdWtype, "vdWtype", "Lennard-Jones"); |
| 50 |
|
DefineOptionalParameterWithDefaultValue(DistanceMixingRule, "DistanceMixingRule", "arithmetic"); |
| 51 |
|
DefineOptionalParameterWithDefaultValue(DistanceType, "DistanceType", "sigma"); |
| 52 |
|
DefineOptionalParameterWithDefaultValue(EnergyMixingRule, "EnergyMixingRule", "geometric"); |
| 53 |
|
DefineOptionalParameterWithDefaultValue(EnergyUnitScaling, "EnergyUnitScaling", 1.0); |
| 54 |
+ |
DefineOptionalParameterWithDefaultValue(MetallicEnergyUnitScaling, "MetallicEnergyUnitScaling", 1.0); |
| 55 |
|
DefineOptionalParameterWithDefaultValue(DistanceUnitScaling, "DistanceUnitScaling", 1.0); |
| 56 |
|
DefineOptionalParameterWithDefaultValue(AngleUnitScaling, "AngleUnitScaling", 1.0); |
| 57 |
< |
DefineOptionalParameterWithDefaultValue(TorsionAngleConvention, "TorsionAngleConvention", "180 is trans"); |
| 57 |
> |
DefineOptionalParameterWithDefaultValue(TorsionAngleConvention, "TorsionAngleConvention", "180_is_trans"); |
| 58 |
> |
DefineOptionalParameterWithDefaultValue(vdw12scale, "vdW-12-scale", 0.0); |
| 59 |
> |
DefineOptionalParameterWithDefaultValue(vdw13scale, "vdW-13-scale", 0.0); |
| 60 |
|
DefineOptionalParameterWithDefaultValue(vdw14scale, "vdW-14-scale", 0.0); |
| 61 |
< |
DefineOptionalParameterWithDefaultValue(electrostatic14scale, "electrostatic-14-scale", 0.0); |
| 62 |
< |
DefineOptionalParameterWithDefaultValue(dielectric, "dielectric", 1.0); |
| 61 |
> |
DefineOptionalParameterWithDefaultValue(electrostatic12scale, "electrostatic-12-scale", 0.0) |
| 62 |
> |
DefineOptionalParameterWithDefaultValue(electrostatic13scale, "electrostatic-13-scale", 0.0) |
| 63 |
> |
DefineOptionalParameterWithDefaultValue(electrostatic14scale, "electrostatic-14-scale", 0.0) |
| 64 |
> |
DefineOptionalParameterWithDefaultValue(GayBerneMu, "GayBerneMu", 2.0); |
| 65 |
> |
DefineOptionalParameterWithDefaultValue(GayBerneNu, "GayBerneNu", 1.0); |
| 66 |
|
} |
| 67 |
|
|
| 68 |
|
|
| 69 |
|
void ForceFieldOptions::makeFortranOptions(ForceOptions& fortranForceOptions){ |
| 70 |
|
|
| 71 |
+ |
fortranForceOptions.vdw12scale = this->getvdw12scale(); |
| 72 |
+ |
fortranForceOptions.vdw13scale = this->getvdw13scale(); |
| 73 |
|
fortranForceOptions.vdw14scale = this->getvdw14scale(); |
| 74 |
+ |
fortranForceOptions.electrostatic12scale = this->getelectrostatic12scale(); |
| 75 |
+ |
fortranForceOptions.electrostatic13scale = this->getelectrostatic13scale(); |
| 76 |
|
fortranForceOptions.electrostatic14scale = this->getelectrostatic14scale(); |
| 77 |
+ |
fortranForceOptions.GayBerneMu = this->getGayBerneMu(); |
| 78 |
+ |
fortranForceOptions.GayBerneNu = this->getGayBerneNu(); |
| 79 |
|
|
| 80 |
+ |
|
| 81 |
|
std::string DistanceMix = this->getDistanceMixingRule(); |
| 82 |
|
toUpper(DistanceMix); |
| 83 |
|
if(DistanceMix == "ARITHMETIC"){ |
| 84 |
|
fortranForceOptions.DistanceMixingRule = ARITHMETIC_MIXING_RULE; |
| 85 |
|
}else if(DistanceMix == "GEOMETRIC"){ |
| 86 |
|
fortranForceOptions.DistanceMixingRule = GEOMETRIC_MIXING_RULE; |
| 87 |
+ |
}else if(DistanceMix == "CUBIC"){ |
| 88 |
+ |
fortranForceOptions.DistanceMixingRule = CUBIC_MIXING_RULE; |
| 89 |
|
}else{ |
| 90 |
|
fortranForceOptions.DistanceMixingRule = ARITHMETIC_MIXING_RULE; |
| 91 |
|
} |
| 95 |
|
fortranForceOptions.EnergyMixingRule = ARITHMETIC_MIXING_RULE; |
| 96 |
|
}else if(EnergyMix == "GEOMETRIC"){ |
| 97 |
|
fortranForceOptions.EnergyMixingRule = GEOMETRIC_MIXING_RULE; |
| 98 |
+ |
}else if(EnergyMix == "HHG"){ |
| 99 |
+ |
fortranForceOptions.EnergyMixingRule = HHG_MIXING_RULE; |
| 100 |
|
}else{ |
| 101 |
|
fortranForceOptions.EnergyMixingRule = GEOMETRIC_MIXING_RULE; |
| 102 |
|
} |