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38 | * University of Notre Dame has been advised of the possibility of | |
39 | * such damages. | |
40 | */ | |
41 | < | |
41 | > | #define __OOPSE_C |
42 | #include "io/ForceFieldOptions.hpp" | |
43 | + | |
44 | namespace oopse { | |
45 | ||
46 | ForceFieldOptions::ForceFieldOptions() { | |
47 | DefineOptionalParameter(Name, "Name"); | |
48 | + | DefineOptionalParameter(CutoffPolicy, "cutoffPolicy"); |
49 | DefineOptionalParameterWithDefaultValue(vdWtype, "vdWtype", "Lennard-Jones"); | |
50 | DefineOptionalParameterWithDefaultValue(DistanceMixingRule, "DistanceMixingRule", "arithmetic"); | |
51 | DefineOptionalParameterWithDefaultValue(DistanceType, "DistanceType", "sigma"); | |
52 | DefineOptionalParameterWithDefaultValue(EnergyMixingRule, "EnergyMixingRule", "geometric"); | |
53 | DefineOptionalParameterWithDefaultValue(EnergyUnitScaling, "EnergyUnitScaling", 1.0); | |
54 | + | DefineOptionalParameterWithDefaultValue(MetallicEnergyUnitScaling, "MetallicEnergyUnitScaling", 1.0); |
55 | DefineOptionalParameterWithDefaultValue(DistanceUnitScaling, "DistanceUnitScaling", 1.0); | |
56 | DefineOptionalParameterWithDefaultValue(AngleUnitScaling, "AngleUnitScaling", 1.0); | |
57 | < | DefineOptionalParameterWithDefaultValue(TorsionAngleConvention, "TorsionAngleConvention", "180 is trans"); |
57 | > | DefineOptionalParameterWithDefaultValue(TorsionAngleConvention, "TorsionAngleConvention", "180_is_trans"); |
58 | > | DefineOptionalParameterWithDefaultValue(vdw12scale, "vdW-12-scale", 0.0); |
59 | > | DefineOptionalParameterWithDefaultValue(vdw13scale, "vdW-13-scale", 0.0); |
60 | DefineOptionalParameterWithDefaultValue(vdw14scale, "vdW-14-scale", 0.0); | |
61 | < | DefineOptionalParameterWithDefaultValue(electrostatic14scale, "electrostatic-14-scale", 0.0); |
62 | < | DefineOptionalParameterWithDefaultValue(dielectric, "dielectric", 1.0); |
61 | > | DefineOptionalParameterWithDefaultValue(electrostatic12scale, "electrostatic-12-scale", 0.0) |
62 | > | DefineOptionalParameterWithDefaultValue(electrostatic13scale, "electrostatic-13-scale", 0.0) |
63 | > | DefineOptionalParameterWithDefaultValue(electrostatic14scale, "electrostatic-14-scale", 0.0) |
64 | > | DefineOptionalParameterWithDefaultValue(GayBerneMu, "GayBerneMu", 2.0); |
65 | > | DefineOptionalParameterWithDefaultValue(GayBerneNu, "GayBerneNu", 1.0); |
66 | } | |
67 | ||
68 | + | |
69 | + | void ForceFieldOptions::makeFortranOptions(ForceOptions& fortranForceOptions){ |
70 | + | |
71 | + | fortranForceOptions.vdw12scale = this->getvdw12scale(); |
72 | + | fortranForceOptions.vdw13scale = this->getvdw13scale(); |
73 | + | fortranForceOptions.vdw14scale = this->getvdw14scale(); |
74 | + | fortranForceOptions.electrostatic12scale = this->getelectrostatic12scale(); |
75 | + | fortranForceOptions.electrostatic13scale = this->getelectrostatic13scale(); |
76 | + | fortranForceOptions.electrostatic14scale = this->getelectrostatic14scale(); |
77 | + | fortranForceOptions.GayBerneMu = this->getGayBerneMu(); |
78 | + | fortranForceOptions.GayBerneNu = this->getGayBerneNu(); |
79 | + | |
80 | + | |
81 | + | std::string DistanceMix = this->getDistanceMixingRule(); |
82 | + | toUpper(DistanceMix); |
83 | + | if(DistanceMix == "ARITHMETIC"){ |
84 | + | fortranForceOptions.DistanceMixingRule = ARITHMETIC_MIXING_RULE; |
85 | + | }else if(DistanceMix == "GEOMETRIC"){ |
86 | + | fortranForceOptions.DistanceMixingRule = GEOMETRIC_MIXING_RULE; |
87 | + | }else if(DistanceMix == "CUBIC"){ |
88 | + | fortranForceOptions.DistanceMixingRule = CUBIC_MIXING_RULE; |
89 | + | }else{ |
90 | + | fortranForceOptions.DistanceMixingRule = ARITHMETIC_MIXING_RULE; |
91 | + | } |
92 | + | std::string EnergyMix = this->getEnergyMixingRule(); |
93 | + | toUpper(EnergyMix); |
94 | + | if(EnergyMix == "ARITHMETIC"){ |
95 | + | fortranForceOptions.EnergyMixingRule = ARITHMETIC_MIXING_RULE; |
96 | + | }else if(EnergyMix == "GEOMETRIC"){ |
97 | + | fortranForceOptions.EnergyMixingRule = GEOMETRIC_MIXING_RULE; |
98 | + | }else if(EnergyMix == "HHG"){ |
99 | + | fortranForceOptions.EnergyMixingRule = HHG_MIXING_RULE; |
100 | + | }else{ |
101 | + | fortranForceOptions.EnergyMixingRule = GEOMETRIC_MIXING_RULE; |
102 | + | } |
103 | + | |
104 | + | |
105 | + | } |
106 | + | |
107 | } |
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