| 121 |
|
DefineOptionalParameter(SurfaceTension, "surfaceTension"); |
| 122 |
|
DefineOptionalParameter(PrintPressureTensor, "printPressureTensor"); |
| 123 |
|
DefineOptionalParameter(ElectrostaticSummationMethod, "electrostaticSummationMethod"); |
| 124 |
+ |
DefineOptionalParameter(ElectrostaticScreeningMethod, "electrostaticScreeningMethod"); |
| 125 |
|
DefineOptionalParameter(CutoffPolicy, "cutoffPolicy"); |
| 125 |
– |
DefineOptionalParameter(StatFileFormat, "statFileFormat"); |
| 126 |
|
|
| 127 |
|
DefineOptionalParameterWithDefaultValue(MixingRule, "mixingRule", "standard"); |
| 128 |
|
DefineOptionalParameterWithDefaultValue(UsePeriodicBoundaryConditions, "usePeriodicBoundaryConditions", true); |
| 134 |
|
DefineOptionalParameterWithDefaultValue(ThermIntDistSpringConst, "thermIntDistSpringConst", 6.0); |
| 135 |
|
DefineOptionalParameterWithDefaultValue(ThermIntThetaSpringConst, "thermIntThetaSpringConst", 7.5); |
| 136 |
|
DefineOptionalParameterWithDefaultValue(ThermIntOmegaSpringConst, "thermIntOmegaSpringConst", 13.5); |
| 137 |
< |
DefineOptionalParameterWithDefaultValue(DampingAlpha, "dampingAlpha", 1.5); |
| 137 |
> |
DefineOptionalParameterWithDefaultValue(DampingAlpha, "dampingAlpha", 0.2); |
| 138 |
|
DefineOptionalParameterWithDefaultValue(CompressDumpFile, "compressDumpFile", 0); |
| 139 |
|
DefineOptionalParameterWithDefaultValue(SkinThickness, "skinThickness", 1.0); |
| 140 |
+ |
DefineOptionalParameterWithDefaultValue(StatFileFormat, "statFileFormat", "TIME|TOTAL_ENERGY|POTENTIAL_ENERGY|KINETIC_ENERGY|TEMPERATURE|PRESSURE|VOLUME|CONSERVED_QUANTITY"); |
| 141 |
+ |
|
| 142 |
|
|
| 143 |
|
} |
| 144 |
|
|
| 343 |
|
CheckParameter(Ensemble, isEqualIgnoreCase(std::string("NVE")) || isEqualIgnoreCase(std::string("NVT")) || |
| 344 |
|
isEqualIgnoreCase(std::string("NPTi")) || isEqualIgnoreCase(std::string("NPTf"))|| |
| 345 |
|
isEqualIgnoreCase(std::string("NPTxyz")) ); |
| 344 |
– |
|
| 346 |
|
CheckParameter(Dt, isPositive()); |
| 347 |
|
CheckParameter(RunTime, isPositive()); |
| 348 |
|
CheckParameter(InitialConfig, isNotEmpty()); |
| 386 |
|
CheckParameter(ThermIntThetaSpringConst, isPositive()); |
| 387 |
|
CheckParameter(ThermIntOmegaSpringConst, isPositive()); |
| 388 |
|
CheckParameter(SurfaceTension, isPositive()); |
| 389 |
< |
CheckParameter(ElectrostaticSummationMethod, isEqualIgnoreCase(std::string("NONE")) || isEqualIgnoreCase(std::string("UNDAMPED_WOLF")) || isEqualIgnoreCase(std::string("DAMPED_WOLF")) || isEqualIgnoreCase(std::string("REACTION_FIELD")) ); |
| 389 |
> |
CheckParameter(ElectrostaticSummationMethod, isEqualIgnoreCase(std::string("NONE")) || isEqualIgnoreCase(std::string("SHIFTED_POTENTIAL")) || isEqualIgnoreCase(std::string("SHIFTED_FORCE")) || isEqualIgnoreCase(std::string("REACTION_FIELD"))); |
| 390 |
> |
CheckParameter(ElectrostaticScreeningMethod, isEqualIgnoreCase(std::string("UNDAMPED")) || isEqualIgnoreCase(std::string("DAMPED"))); |
| 391 |
|
CheckParameter(CutoffPolicy, isEqualIgnoreCase(std::string("MIX")) || isEqualIgnoreCase(std::string("MAX")) || isEqualIgnoreCase(std::string("TRADITIONAL"))); |
| 392 |
|
//CheckParameter(StatFileFormat,); |
| 393 |
|
//CheckParameter(MixingRule,); |
| 395 |
|
CheckParameter(ThermIntDistSpringConst, isPositive()); |
| 396 |
|
CheckParameter(ThermIntThetaSpringConst, isPositive()); |
| 397 |
|
CheckParameter(ThermIntOmegaSpringConst, isPositive()); |
| 398 |
< |
CheckParameter(DampingAlpha,isPositive()); |
| 398 |
> |
CheckParameter(DampingAlpha,isNonNegative()); |
| 399 |
|
CheckParameter(SkinThickness, isPositive()); |
| 400 |
|
|
| 401 |
|
//@todo memory leak |