| 1 | /* | 
| 2 | * Copyright (c) 2005 The University of Notre Dame. All Rights Reserved. | 
| 3 | * | 
| 4 | * The University of Notre Dame grants you ("Licensee") a | 
| 5 | * non-exclusive, royalty free, license to use, modify and | 
| 6 | * redistribute this software in source and binary code form, provided | 
| 7 | * that the following conditions are met: | 
| 8 | * | 
| 9 | * 1. Acknowledgement of the program authors must be made in any | 
| 10 | *    publication of scientific results based in part on use of the | 
| 11 | *    program.  An acceptable form of acknowledgement is citation of | 
| 12 | *    the article in which the program was described (Matthew | 
| 13 | *    A. Meineke, Charles F. Vardeman II, Teng Lin, Christopher | 
| 14 | *    J. Fennell and J. Daniel Gezelter, "OOPSE: An Object-Oriented | 
| 15 | *    Parallel Simulation Engine for Molecular Dynamics," | 
| 16 | *    J. Comput. Chem. 26, pp. 252-271 (2005)) | 
| 17 | * | 
| 18 | * 2. Redistributions of source code must retain the above copyright | 
| 19 | *    notice, this list of conditions and the following disclaimer. | 
| 20 | * | 
| 21 | * 3. Redistributions in binary form must reproduce the above copyright | 
| 22 | *    notice, this list of conditions and the following disclaimer in the | 
| 23 | *    documentation and/or other materials provided with the | 
| 24 | *    distribution. | 
| 25 | * | 
| 26 | * This software is provided "AS IS," without a warranty of any | 
| 27 | * kind. All express or implied conditions, representations and | 
| 28 | * warranties, including any implied warranty of merchantability, | 
| 29 | * fitness for a particular purpose or non-infringement, are hereby | 
| 30 | * excluded.  The University of Notre Dame and its licensors shall not | 
| 31 | * be liable for any damages suffered by licensee as a result of | 
| 32 | * using, modifying or distributing the software or its | 
| 33 | * derivatives. In no event will the University of Notre Dame or its | 
| 34 | * licensors be liable for any lost revenue, profit or data, or for | 
| 35 | * direct, indirect, special, consequential, incidental or punitive | 
| 36 | * damages, however caused and regardless of the theory of liability, | 
| 37 | * arising out of the use of or inability to use software, even if the | 
| 38 | * University of Notre Dame has been advised of the possibility of | 
| 39 | * such damages. | 
| 40 | */ | 
| 41 |  | 
| 42 | #include <stdlib.h> | 
| 43 | #include <stdio.h> | 
| 44 | #include <string.h> | 
| 45 |  | 
| 46 | #include "io/Globals.hpp" | 
| 47 | #include "utils/simError.h" | 
| 48 | #ifdef IS_MPI | 
| 49 | #include "io/mpiBASS.h" | 
| 50 | #endif // is_mpi | 
| 51 |  | 
| 52 | /* | 
| 53 | * The following section lists all of the defined tokens for the | 
| 54 | * global assignment statements. All are prefixed with a G_ to avoid | 
| 55 | * stepping on any previously defined enumerations. | 
| 56 | * | 
| 57 | * NOTE: tokens start at 1, 0 is a resrved token number | 
| 58 | */ | 
| 59 |  | 
| 60 | //required parameters | 
| 61 | #define G_FORCEFIELD         1 | 
| 62 | #define G_NCOMPONENTS        2 | 
| 63 | #define G_TARGETTEMP         3 | 
| 64 | #define G_ENSEMBLE           4 | 
| 65 | #define G_DT                 5 | 
| 66 | #define G_RUNTIME            6 | 
| 67 |  | 
| 68 | //optional parameters | 
| 69 | #define G_INITIALCONFIG      7 | 
| 70 | #define G_FINALCONFIG        8 | 
| 71 | #define G_NMOL               9 | 
| 72 | #define G_DENSITY           10 | 
| 73 | #define G_BOX               11 | 
| 74 | #define G_BOXX              12 | 
| 75 | #define G_BOXY              13 | 
| 76 | #define G_BOXZ              14 | 
| 77 | #define G_SAMPLETIME        15 | 
| 78 | #define G_STATUSTIME        16 | 
| 79 | #define G_RCUT              17 | 
| 80 | #define G_RSW               18 | 
| 81 | #define G_DIELECTRIC        19 | 
| 82 | #define G_TEMPSET           20 | 
| 83 | #define G_THERMALTIME       21 | 
| 84 | #define G_USEPBC            22 | 
| 85 | #define G_MIXINGRULE        23 | 
| 86 | #define G_USERF             24 | 
| 87 | #define G_TARGETPRESSURE    25 | 
| 88 | #define G_TAUTHERMOSTAT     26 | 
| 89 | #define G_TAUBAROSTAT       27 | 
| 90 | #define G_ZCONSTIME         28 | 
| 91 | #define G_NZCONSTRAINTS     29 | 
| 92 | #define G_ZCONSTOL          30 | 
| 93 | #define G_ZCONSFORCEPOLICY  31 | 
| 94 | #define G_SEED              32 | 
| 95 | #define G_RESETTIME         33 | 
| 96 | #define G_USEINITTIME       34 | 
| 97 | #define G_USEINIT_XS_STATE  35 | 
| 98 | #define G_ORTHOBOXTOLERANCE 36 | 
| 99 | #define G_MINIMIZER         37 | 
| 100 | #define G_MIN_MAXITER       38 | 
| 101 | #define G_MIN_WRITEFRQ      39 | 
| 102 | #define G_MIN_STEPSIZE      40 | 
| 103 | #define G_MIN_FTOL          41 | 
| 104 | #define G_MIN_GTOL          42 | 
| 105 | #define G_MIN_LSTOL         43 | 
| 106 | #define G_MIN_LSMAXITER     44 | 
| 107 | #define G_ZCONSGAP          45 | 
| 108 | #define G_ZCONSFIXTIME      46 | 
| 109 | #define G_ZCONSUSINGSMD     47 | 
| 110 | #define G_USE_SOLID_THERM_INT     48 | 
| 111 | #define G_USE_LIQUID_THERM_INT    49 | 
| 112 | #define G_THERM_INT_LAMBDA  50 | 
| 113 | #define G_THERM_INT_K       51 | 
| 114 | #define G_FORCEFIELD_VARIANT 52 | 
| 115 | #define G_FORCEFIELD_FILENAME 53 | 
| 116 | #define G_THERM_INT_DIST_SPRING  54 | 
| 117 | #define G_THERM_INT_THETA_SPRING 55 | 
| 118 | #define G_THERM_INT_OMEGA_SPRING 56 | 
| 119 | #define G_SURFACETENSION 57 | 
| 120 | #define G_PRINTPREESURETENSOR   58 | 
| 121 |  | 
| 122 | Globals::Globals(){ | 
| 123 | initalize(); | 
| 124 | } | 
| 125 |  | 
| 126 | Globals::~Globals(){ | 
| 127 | int i; | 
| 128 | if( components != NULL ){ | 
| 129 | for( i=0; i<n_components; i++ ) delete components[i]; | 
| 130 | delete[] components; | 
| 131 | } | 
| 132 | } | 
| 133 |  | 
| 134 | void Globals::initalize(){ | 
| 135 | int i; | 
| 136 |  | 
| 137 | components = NULL; | 
| 138 |  | 
| 139 | command_table.insert(CommandMapType::value_type("forceField", G_FORCEFIELD)); | 
| 140 | command_table.insert(CommandMapType::value_type("nComponents", G_NCOMPONENTS)); | 
| 141 | command_table.insert(CommandMapType::value_type("targetTemp", G_TARGETTEMP)); | 
| 142 | command_table.insert(CommandMapType::value_type("ensemble", G_ENSEMBLE)); | 
| 143 | command_table.insert(CommandMapType::value_type("dt", G_DT)); | 
| 144 | command_table.insert(CommandMapType::value_type("runTime", G_RUNTIME)); | 
| 145 | command_table.insert(CommandMapType::value_type("initialConfig", G_INITIALCONFIG)); | 
| 146 | command_table.insert(CommandMapType::value_type("finalConfig", G_FINALCONFIG)); | 
| 147 | command_table.insert(CommandMapType::value_type("nMol", G_NMOL)); | 
| 148 | command_table.insert(CommandMapType::value_type("density", G_DENSITY)); | 
| 149 | command_table.insert(CommandMapType::value_type("box", G_BOX)); | 
| 150 | command_table.insert(CommandMapType::value_type("boxX", G_BOXX)); | 
| 151 | command_table.insert(CommandMapType::value_type("boxY", G_BOXY)); | 
| 152 | command_table.insert(CommandMapType::value_type("boxZ", G_BOXZ)); | 
| 153 | command_table.insert(CommandMapType::value_type("sampleTime", G_SAMPLETIME)); | 
| 154 | command_table.insert(CommandMapType::value_type("resetTime", G_RESETTIME)); | 
| 155 | command_table.insert(CommandMapType::value_type("statusTime", G_STATUSTIME)); | 
| 156 | command_table.insert(CommandMapType::value_type("cutoffRadius", G_RCUT)); | 
| 157 | command_table.insert(CommandMapType::value_type("switchingRadius", G_RSW)); | 
| 158 | command_table.insert(CommandMapType::value_type("dielectric", G_DIELECTRIC)); | 
| 159 | command_table.insert(CommandMapType::value_type("tempSet", G_TEMPSET)); | 
| 160 | command_table.insert(CommandMapType::value_type("thermalTime", G_THERMALTIME)); | 
| 161 | command_table.insert(CommandMapType::value_type("mixingRule", G_MIXINGRULE)); | 
| 162 | command_table.insert(CommandMapType::value_type("usePeriodicBoundaryConditions", G_USEPBC)); | 
| 163 | command_table.insert(CommandMapType::value_type("useReactionField", G_USERF)); | 
| 164 | command_table.insert(CommandMapType::value_type("targetPressure", G_TARGETPRESSURE)); | 
| 165 | command_table.insert(CommandMapType::value_type("tauThermostat", G_TAUTHERMOSTAT)); | 
| 166 | command_table.insert(CommandMapType::value_type("tauBarostat", G_TAUBAROSTAT)); | 
| 167 | command_table.insert(CommandMapType::value_type("zconsTime", G_ZCONSTIME)); | 
| 168 | command_table.insert(CommandMapType::value_type("nZconstraints", G_NZCONSTRAINTS)); | 
| 169 | command_table.insert(CommandMapType::value_type("zconsTol", G_ZCONSTOL)); | 
| 170 | command_table.insert(CommandMapType::value_type("zconsForcePolicy", G_ZCONSFORCEPOLICY)); | 
| 171 | command_table.insert(CommandMapType::value_type("seed", G_SEED)); | 
| 172 | command_table.insert(CommandMapType::value_type("useInitialTime", G_USEINITTIME)); | 
| 173 | command_table.insert(CommandMapType::value_type("useInitialExtendedSystemState", G_USEINIT_XS_STATE)); | 
| 174 | command_table.insert(CommandMapType::value_type("orthoBoxTolerance", G_ORTHOBOXTOLERANCE)); | 
| 175 | command_table.insert(CommandMapType::value_type("minimizer", G_MINIMIZER)); | 
| 176 | command_table.insert(CommandMapType::value_type("minimizerMaxIter", G_MIN_MAXITER)); | 
| 177 | command_table.insert(CommandMapType::value_type("minimizerWriteFrq", G_MIN_WRITEFRQ)); | 
| 178 | command_table.insert(CommandMapType::value_type("minimizerStepSize", G_MIN_STEPSIZE)); | 
| 179 | command_table.insert(CommandMapType::value_type("minimizerFTol", G_MIN_FTOL)); | 
| 180 | command_table.insert(CommandMapType::value_type("minimizerGTol", G_MIN_GTOL)); | 
| 181 | command_table.insert(CommandMapType::value_type("minimizerLSTol", G_MIN_LSTOL)); | 
| 182 | command_table.insert(CommandMapType::value_type("minimizerLSMaxIter", G_MIN_LSMAXITER)); | 
| 183 | command_table.insert(CommandMapType::value_type("zconsGap", G_ZCONSGAP)); | 
| 184 | command_table.insert(CommandMapType::value_type("zconsFixtime", G_ZCONSFIXTIME)); | 
| 185 | command_table.insert(CommandMapType::value_type("zconsUsingSMD", G_ZCONSUSINGSMD)); | 
| 186 | command_table.insert(CommandMapType::value_type("useSolidThermInt", G_USE_SOLID_THERM_INT)); | 
| 187 | command_table.insert(CommandMapType::value_type("useLiquidThermInt", G_USE_LIQUID_THERM_INT)); | 
| 188 | command_table.insert(CommandMapType::value_type("thermodynamicIntegrationLambda", G_THERM_INT_LAMBDA)); | 
| 189 | command_table.insert(CommandMapType::value_type("thermodynamicIntegrationK", G_THERM_INT_K)); | 
| 190 | command_table.insert(CommandMapType::value_type("forceFieldVariant", G_FORCEFIELD_VARIANT)); | 
| 191 | command_table.insert(CommandMapType::value_type("forceFieldFileName", G_FORCEFIELD_FILENAME)); | 
| 192 | command_table.insert(CommandMapType::value_type("thermIntDistSpringConst", G_THERM_INT_DIST_SPRING)); | 
| 193 | command_table.insert(CommandMapType::value_type("thermIntThetaSpringConst", G_THERM_INT_THETA_SPRING)); | 
| 194 | command_table.insert(CommandMapType::value_type("thermIntOmegaSpringConst", G_THERM_INT_OMEGA_SPRING)); | 
| 195 | command_table.insert(CommandMapType::value_type("surfaceTension", G_SURFACETENSION)); | 
| 196 | command_table.insert(CommandMapType::value_type("printPressureTensor", G_PRINTPREESURETENSOR)); | 
| 197 |  | 
| 198 |  | 
| 199 | strcpy( mixingRule,"standard");  //default mixing rules to standard. | 
| 200 | usePBC = 1; //default  periodic boundry conditions to on | 
| 201 | useRF  = 0; | 
| 202 | useInitTime = 0; // default to pull init time from the init file | 
| 203 | useInitXSstate = 0; // default to pull the extended state from the init file | 
| 204 | orthoBoxTolerance = 1E-6; | 
| 205 | useSolidThermInt = 0; // default solid-state thermodynamic integration to off | 
| 206 | useLiquidThermInt = 0; // default liquid thermodynamic integration to off | 
| 207 |  | 
| 208 | have_force_field =  0; | 
| 209 | have_n_components = 0; | 
| 210 | have_target_temp =  0; | 
| 211 | have_ensemble =     0; | 
| 212 | have_dt =           0; | 
| 213 | have_run_time =     0; | 
| 214 |  | 
| 215 | have_initial_config = 0; | 
| 216 | have_final_config =   0; | 
| 217 | have_n_mol =          0; | 
| 218 | have_density =        0; | 
| 219 | have_box =            0; | 
| 220 | have_box_x =          0; | 
| 221 | have_box_y =          0; | 
| 222 | have_box_y =          0; | 
| 223 | have_box_z =          0; | 
| 224 | have_sample_time =    0; | 
| 225 | have_status_time =    0; | 
| 226 | have_reset_time =     0; | 
| 227 | have_thermal_time =   0; | 
| 228 | have_rcut =           0; | 
| 229 | have_rsw =            0; | 
| 230 | have_dielectric =     0; | 
| 231 | have_tempSet =        0; | 
| 232 | have_target_pressure =0; | 
| 233 | have_q_mass =         0; | 
| 234 | have_tau_thermostat = 0; | 
| 235 | have_tau_barostat   = 0; | 
| 236 | have_zcons_time     = 0; | 
| 237 | have_n_zConstraints = 0; | 
| 238 | have_zConstraints   = 0; | 
| 239 | have_zcons_tol = 0; | 
| 240 | have_zcons_gap = 0; | 
| 241 | have_zcons_fixtime = 0; | 
| 242 | have_zcons_using_smd = 0; | 
| 243 | have_seed = 0; | 
| 244 | have_minimizer = 0; | 
| 245 | have_minimizer_maxiteration = 0; | 
| 246 | have_minimizer_writefrq = 0; | 
| 247 | have_minimizer_stepsize = 0; | 
| 248 | have_minimizer_ftol = 0; | 
| 249 | have_minimizer_gtol = 0; | 
| 250 | have_minimizer_ls_tol = 0; | 
| 251 | have_minimizer_ls_maxiteration = 0; | 
| 252 | have_thermodynamic_integration_lambda = 0; | 
| 253 | have_thermodynamic_integration_k = 0; | 
| 254 | have_forcefield_variant = 0; | 
| 255 | have_forcefield_filename = 0; | 
| 256 | have_dist_spring_constant =  0; | 
| 257 | have_theta_spring_constant = 0; | 
| 258 | have_omega_spring_constant = 0; | 
| 259 | have_surface_tension = 0; | 
| 260 | have_print_pressure_tensor = 0; | 
| 261 | } | 
| 262 |  | 
| 263 | int Globals::newComponent( event* the_event ){ | 
| 264 |  | 
| 265 | current_component = new Component; | 
| 266 | int index = the_event->evt.blk_index; | 
| 267 | char err[200]; | 
| 268 |  | 
| 269 | if( have_n_components && index < n_components ) | 
| 270 | components[index] = current_component; | 
| 271 | else{ | 
| 272 | if( have_n_components ){ | 
| 273 | sprintf( err, "meta-data parsing error: %d out of nComponents range", | 
| 274 | index ); | 
| 275 | the_event->err_msg = strdup( err ); | 
| 276 | return 0; | 
| 277 | } | 
| 278 | else{ | 
| 279 | the_event->err_msg = strdup("meta-data parsing error: nComponents not given before" | 
| 280 | " first component declaration." ); | 
| 281 | return 0; | 
| 282 | } | 
| 283 | } | 
| 284 |  | 
| 285 | return 1; | 
| 286 | } | 
| 287 |  | 
| 288 |  | 
| 289 |  | 
| 290 | int Globals::componentAssign( event* the_event ){ | 
| 291 |  | 
| 292 | switch( the_event->evt.asmt.asmt_type ){ | 
| 293 |  | 
| 294 | case STRING: | 
| 295 | return current_component->assignString( the_event->evt.asmt.lhs, | 
| 296 | the_event->evt.asmt.rhs.sval, | 
| 297 | &(the_event->err_msg)); | 
| 298 | break; | 
| 299 |  | 
| 300 | case DOUBLE: | 
| 301 | return current_component->assignDouble( the_event->evt.asmt.lhs, | 
| 302 | the_event->evt.asmt.rhs.dval, | 
| 303 | &(the_event->err_msg)); | 
| 304 | break; | 
| 305 |  | 
| 306 | case INT: | 
| 307 | return current_component->assignInt( the_event->evt.asmt.lhs, | 
| 308 | the_event->evt.asmt.rhs.ival, | 
| 309 | &(the_event->err_msg)); | 
| 310 | break; | 
| 311 |  | 
| 312 | default: | 
| 313 | the_event->err_msg = strdup( "Globals error. Invalid component" | 
| 314 | " assignment type" ); | 
| 315 | return 0; | 
| 316 | break; | 
| 317 | } | 
| 318 | return 0; | 
| 319 | } | 
| 320 |  | 
| 321 | int Globals::componentEnd( event* the_event ){ | 
| 322 |  | 
| 323 | the_event->err_msg = current_component->checkMe(); | 
| 324 | if( the_event->err_msg != NULL ) return 0; | 
| 325 |  | 
| 326 | return 1; | 
| 327 | } | 
| 328 |  | 
| 329 | int Globals::newZconstraint( event* the_event ){ | 
| 330 |  | 
| 331 |  | 
| 332 | int index = the_event->evt.blk_index; | 
| 333 | char err[200]; | 
| 334 | current_zConstraint = new ZconStamp( index ); | 
| 335 |  | 
| 336 | have_zConstraints = 1; | 
| 337 |  | 
| 338 | if( have_n_zConstraints && index < n_zConstraints ) | 
| 339 | zConstraints[index] = current_zConstraint; | 
| 340 | else{ | 
| 341 | if( have_n_zConstraints ){ | 
| 342 | sprintf( err, "meta-data parsing error: %d out of nZconstraints range", | 
| 343 | index ); | 
| 344 | the_event->err_msg = strdup( err ); | 
| 345 | return 0; | 
| 346 | } | 
| 347 | else{ | 
| 348 | the_event->err_msg = strdup("meta-data parsing error: nZconstraints" | 
| 349 | " not given before" | 
| 350 | " first zConstraint declaration." ); | 
| 351 | return 0; | 
| 352 | } | 
| 353 | } | 
| 354 |  | 
| 355 | return 1; | 
| 356 | } | 
| 357 |  | 
| 358 |  | 
| 359 |  | 
| 360 | int Globals::zConstraintAssign( event* the_event ){ | 
| 361 |  | 
| 362 | switch( the_event->evt.asmt.asmt_type ){ | 
| 363 |  | 
| 364 | case STRING: | 
| 365 | return current_zConstraint->assignString( the_event->evt.asmt.lhs, | 
| 366 | the_event->evt.asmt.rhs.sval, | 
| 367 | &(the_event->err_msg)); | 
| 368 | break; | 
| 369 |  | 
| 370 | case DOUBLE: | 
| 371 | return current_zConstraint->assignDouble( the_event->evt.asmt.lhs, | 
| 372 | the_event->evt.asmt.rhs.dval, | 
| 373 | &(the_event->err_msg)); | 
| 374 | break; | 
| 375 |  | 
| 376 | case INT: | 
| 377 | return current_zConstraint->assignInt( the_event->evt.asmt.lhs, | 
| 378 | the_event->evt.asmt.rhs.ival, | 
| 379 | &(the_event->err_msg)); | 
| 380 | break; | 
| 381 |  | 
| 382 | default: | 
| 383 | the_event->err_msg = strdup( "Globals error. Invalid zConstraint" | 
| 384 | " assignment type" ); | 
| 385 | return 0; | 
| 386 | break; | 
| 387 | } | 
| 388 | return 0; | 
| 389 | } | 
| 390 |  | 
| 391 | int Globals::zConstraintEnd( event* the_event ){ | 
| 392 |  | 
| 393 | the_event->err_msg = current_zConstraint->checkMe(); | 
| 394 | if( the_event->err_msg != NULL ) return 0; | 
| 395 |  | 
| 396 | return 1; | 
| 397 | } | 
| 398 |  | 
| 399 | int Globals::globalAssign( event* the_event ){ | 
| 400 |  | 
| 401 | int key; | 
| 402 | int token; | 
| 403 | interface_assign_type the_type =  the_event->evt.asmt.asmt_type; | 
| 404 | char* lhs = the_event->evt.asmt.lhs; | 
| 405 | char err[300]; | 
| 406 |  | 
| 407 | token = 0; | 
| 408 |  | 
| 409 | CommandMapType::iterator iter; | 
| 410 | std::string keyword(lhs); | 
| 411 | iter = command_table.find(keyword); | 
| 412 | if (iter != command_table.end()) { | 
| 413 | token = iter->second; | 
| 414 | } | 
| 415 |  | 
| 416 | if( token ){ | 
| 417 |  | 
| 418 | switch( token ){ | 
| 419 |  | 
| 420 | case G_FORCEFIELD: | 
| 421 | if( the_type == STRING ){ | 
| 422 | strcpy( force_field, the_event->evt.asmt.rhs.sval ); | 
| 423 | have_force_field = 1; | 
| 424 | return 1; | 
| 425 | } | 
| 426 |  | 
| 427 | the_event->err_msg = | 
| 428 | strdup( "Error in parsing meta-data file!\n\tforceField was not a string assignment.\n" ); | 
| 429 | return 0; | 
| 430 | break; | 
| 431 |  | 
| 432 | case G_NCOMPONENTS: | 
| 433 | if( the_type == STRING ){ | 
| 434 | the_event->err_msg = | 
| 435 | strdup("Error in parsing meta-data file!\n\tnComponents is not a double or an int.\n" ); | 
| 436 | return 0; | 
| 437 | } | 
| 438 |  | 
| 439 | else if( the_type == DOUBLE ){ | 
| 440 | n_components = (int)the_event->evt.asmt.rhs.dval; | 
| 441 | components = new Component*[n_components]; | 
| 442 | have_n_components = 1; | 
| 443 | return 1; | 
| 444 | } | 
| 445 |  | 
| 446 | else{ | 
| 447 | n_components = the_event->evt.asmt.rhs.ival; | 
| 448 | components = new Component*[n_components]; | 
| 449 | have_n_components = 1; | 
| 450 | return 1; | 
| 451 | } | 
| 452 | break; | 
| 453 |  | 
| 454 | case G_NZCONSTRAINTS: | 
| 455 | if( the_type == STRING ){ | 
| 456 | the_event->err_msg = | 
| 457 | strdup("Error in parsing meta-data file!\n\tnZconstraints is not a double or an int.\n" ); | 
| 458 | return 0; | 
| 459 | } | 
| 460 |  | 
| 461 | else if( the_type == DOUBLE ){ | 
| 462 | n_zConstraints = (int)the_event->evt.asmt.rhs.dval; | 
| 463 | zConstraints = new ZconStamp*[n_zConstraints]; | 
| 464 | have_n_zConstraints = 1; | 
| 465 | return 1; | 
| 466 | } | 
| 467 |  | 
| 468 | else{ | 
| 469 | n_zConstraints = the_event->evt.asmt.rhs.ival; | 
| 470 | zConstraints = new ZconStamp*[n_zConstraints]; | 
| 471 | have_n_zConstraints = 1; | 
| 472 | return 1; | 
| 473 | } | 
| 474 | break; | 
| 475 |  | 
| 476 | case G_TARGETTEMP: | 
| 477 | switch( the_type ){ | 
| 478 |  | 
| 479 | case STRING: | 
| 480 | the_event->err_msg = | 
| 481 | strdup( "Error in parsing meta-data file!\n\ttargetTemp is not a double or int.\n" ); | 
| 482 | return 0; | 
| 483 | break; | 
| 484 |  | 
| 485 | case DOUBLE: | 
| 486 | target_temp = the_event->evt.asmt.rhs.dval; | 
| 487 | have_target_temp = 1; | 
| 488 | return 1; | 
| 489 | break; | 
| 490 |  | 
| 491 | case INT: | 
| 492 | target_temp = (double)the_event->evt.asmt.rhs.ival; | 
| 493 | have_target_temp = 1; | 
| 494 | return 1; | 
| 495 | break; | 
| 496 |  | 
| 497 | default: | 
| 498 | the_event->err_msg = | 
| 499 | strdup( "Error in parsing meta-data file!\n\ttargetTemp unrecognized.\n" ); | 
| 500 | return 0; | 
| 501 | break; | 
| 502 | } | 
| 503 | break; | 
| 504 |  | 
| 505 | case G_ORTHOBOXTOLERANCE: | 
| 506 | switch( the_type ){ | 
| 507 |  | 
| 508 | case STRING: | 
| 509 | the_event->err_msg = | 
| 510 | strdup( "Error in parsing meta-data file!\n\torthoBoxTolerance is not a double or int.\n" ); | 
| 511 | return 0; | 
| 512 | break; | 
| 513 |  | 
| 514 | case DOUBLE: | 
| 515 | orthoBoxTolerance = the_event->evt.asmt.rhs.dval; | 
| 516 | have_target_temp = 1; | 
| 517 | return 1; | 
| 518 | break; | 
| 519 |  | 
| 520 | case INT: | 
| 521 | orthoBoxTolerance = (double)the_event->evt.asmt.rhs.ival; | 
| 522 | have_target_temp = 1; | 
| 523 | return 1; | 
| 524 | break; | 
| 525 |  | 
| 526 | default: | 
| 527 | the_event->err_msg = | 
| 528 | strdup( "Global error.orthoBoxTolerance unrecognized.\n" ); | 
| 529 | return 0; | 
| 530 | break; | 
| 531 | } | 
| 532 | break; | 
| 533 |  | 
| 534 | case G_ENSEMBLE: | 
| 535 | if( the_type == STRING ){ | 
| 536 | strcpy( ensemble, the_event->evt.asmt.rhs.sval ); | 
| 537 | have_ensemble = 1; | 
| 538 | return 1; | 
| 539 | } | 
| 540 |  | 
| 541 | the_event->err_msg = | 
| 542 | strdup( "Error in parsing meta-data file!\n\tensemble was not assigned to a string\n" ); | 
| 543 | return 0; | 
| 544 | break; | 
| 545 |  | 
| 546 | case G_MIXINGRULE: | 
| 547 | if( the_type == STRING ){ | 
| 548 | strcpy( mixingRule, the_event->evt.asmt.rhs.sval ); | 
| 549 | return 1; | 
| 550 | } | 
| 551 |  | 
| 552 | the_event->err_msg = | 
| 553 | strdup( "Error in parsing meta-data file!\n\tmixing rule was not assigned to a string\n" ); | 
| 554 | return 0; | 
| 555 | break; | 
| 556 |  | 
| 557 | case G_DT: | 
| 558 | switch( the_type ){ | 
| 559 |  | 
| 560 | case STRING: | 
| 561 | the_event->err_msg = | 
| 562 | strdup( "Error in parsing meta-data file!\n\tdt is not a double or int.\n" ); | 
| 563 | return 0; | 
| 564 | break; | 
| 565 |  | 
| 566 | case DOUBLE: | 
| 567 | dt = the_event->evt.asmt.rhs.dval; | 
| 568 | have_dt = 1; | 
| 569 | return 1; | 
| 570 | break; | 
| 571 |  | 
| 572 | case INT: | 
| 573 | dt = (double)the_event->evt.asmt.rhs.ival; | 
| 574 | have_dt = 1; | 
| 575 | return 1; | 
| 576 | break; | 
| 577 |  | 
| 578 | default: | 
| 579 | the_event->err_msg = | 
| 580 | strdup( "Error in parsing meta-data file!\n\tdt unrecognized.\n" ); | 
| 581 | return 0; | 
| 582 | break; | 
| 583 | } | 
| 584 | break; | 
| 585 |  | 
| 586 | case G_RUNTIME: | 
| 587 | switch( the_type ){ | 
| 588 |  | 
| 589 | case STRING: | 
| 590 | the_event->err_msg = | 
| 591 | strdup( "Error in parsing meta-data file!\n\trunTime is not a double or int.\n" ); | 
| 592 | return 0; | 
| 593 | break; | 
| 594 |  | 
| 595 | case DOUBLE: | 
| 596 | run_time = the_event->evt.asmt.rhs.dval; | 
| 597 | have_run_time = 1; | 
| 598 | return 1; | 
| 599 | break; | 
| 600 |  | 
| 601 | case INT: | 
| 602 | run_time = (double)the_event->evt.asmt.rhs.ival; | 
| 603 | have_run_time = 1; | 
| 604 | return 1; | 
| 605 | break; | 
| 606 |  | 
| 607 | default: | 
| 608 | the_event->err_msg = | 
| 609 | strdup( "Error in parsing meta-data file!\n\trunTime unrecognized.\n" ); | 
| 610 | return 0; | 
| 611 | break; | 
| 612 | } | 
| 613 | break; | 
| 614 |  | 
| 615 | case G_INITIALCONFIG: | 
| 616 | if( the_type == STRING ){ | 
| 617 | strcpy( initial_config, the_event->evt.asmt.rhs.sval ); | 
| 618 | have_initial_config = 1; | 
| 619 | return 1; | 
| 620 | } | 
| 621 |  | 
| 622 | the_event->err_msg = | 
| 623 | strdup( "Error in parsing meta-data file!\n\tinitialConfig was not a string assignment.\n" ); | 
| 624 | return 0; | 
| 625 | break; | 
| 626 |  | 
| 627 | case G_FINALCONFIG: | 
| 628 | if( the_type == STRING ){ | 
| 629 | strcpy( final_config, the_event->evt.asmt.rhs.sval ); | 
| 630 | have_final_config = 1; | 
| 631 | return 1; | 
| 632 | } | 
| 633 |  | 
| 634 | the_event->err_msg = | 
| 635 | strdup( "Error in parsing meta-data file!\n\tfinalConfig was not a string assignment.\n" ); | 
| 636 | return 0; | 
| 637 | break; | 
| 638 |  | 
| 639 | case G_NMOL: | 
| 640 | switch( the_type ){ | 
| 641 |  | 
| 642 | case STRING: | 
| 643 | the_event->err_msg = | 
| 644 | strdup( "Error in parsing meta-data file!\n\tnMol is not a double or int.\n" ); | 
| 645 | return 0; | 
| 646 | break; | 
| 647 |  | 
| 648 | case DOUBLE: | 
| 649 | n_mol = (int)the_event->evt.asmt.rhs.dval; | 
| 650 | have_n_mol = 1; | 
| 651 | return 1; | 
| 652 | break; | 
| 653 |  | 
| 654 | case INT: | 
| 655 | n_mol = the_event->evt.asmt.rhs.ival; | 
| 656 | have_n_mol = 1; | 
| 657 | return 1; | 
| 658 | break; | 
| 659 |  | 
| 660 | default: | 
| 661 | the_event->err_msg = | 
| 662 | strdup( "Error in parsing meta-data file!\n\tnMol unrecognized.\n" ); | 
| 663 | return 0; | 
| 664 | break; | 
| 665 | } | 
| 666 | break; | 
| 667 |  | 
| 668 | case G_DENSITY: | 
| 669 | switch( the_type ){ | 
| 670 |  | 
| 671 | case STRING: | 
| 672 | the_event->err_msg = | 
| 673 | strdup( "Error in parsing meta-data file!\n\tdensity is not a double or int.\n" ); | 
| 674 | return 0; | 
| 675 | break; | 
| 676 |  | 
| 677 | case DOUBLE: | 
| 678 | density = the_event->evt.asmt.rhs.dval; | 
| 679 | have_density = 1; | 
| 680 | return 1; | 
| 681 | break; | 
| 682 |  | 
| 683 | case INT: | 
| 684 | density = (double)the_event->evt.asmt.rhs.ival; | 
| 685 | have_density = 1; | 
| 686 | return 1; | 
| 687 | break; | 
| 688 |  | 
| 689 | default: | 
| 690 | the_event->err_msg = | 
| 691 | strdup( "Error in parsing meta-data file!\n\tdensity unrecognized.\n" ); | 
| 692 | return 0; | 
| 693 | break; | 
| 694 | } | 
| 695 | break; | 
| 696 |  | 
| 697 | case G_BOX: | 
| 698 | switch( the_type ){ | 
| 699 |  | 
| 700 | case STRING: | 
| 701 | the_event->err_msg = | 
| 702 | strdup( "Error in parsing meta-data file!\n\tbox is not a double or int.\n" ); | 
| 703 | return 0; | 
| 704 | break; | 
| 705 |  | 
| 706 | case DOUBLE: | 
| 707 | box = the_event->evt.asmt.rhs.dval; | 
| 708 | have_box = 1; | 
| 709 | return 1; | 
| 710 | break; | 
| 711 |  | 
| 712 | case INT: | 
| 713 | box = (double)the_event->evt.asmt.rhs.ival; | 
| 714 | have_box = 1; | 
| 715 | return 1; | 
| 716 | break; | 
| 717 |  | 
| 718 | default: | 
| 719 | the_event->err_msg = | 
| 720 | strdup( "Error in parsing meta-data file!\n\tbox unrecognized.\n" ); | 
| 721 | return 0; | 
| 722 | break; | 
| 723 | } | 
| 724 | break; | 
| 725 |  | 
| 726 | case G_BOXX: | 
| 727 | switch( the_type ){ | 
| 728 |  | 
| 729 | case STRING: | 
| 730 | the_event->err_msg = | 
| 731 | strdup( "Error in parsing meta-data file!\n\tboxX is not a double or int.\n" ); | 
| 732 | return 0; | 
| 733 | break; | 
| 734 |  | 
| 735 | case DOUBLE: | 
| 736 | box_x = the_event->evt.asmt.rhs.dval; | 
| 737 | have_box_x = 1; | 
| 738 | return 1; | 
| 739 | break; | 
| 740 |  | 
| 741 | case INT: | 
| 742 | box_x = (double)the_event->evt.asmt.rhs.ival; | 
| 743 | have_box_x = 1; | 
| 744 | return 1; | 
| 745 | break; | 
| 746 |  | 
| 747 | default: | 
| 748 | the_event->err_msg = | 
| 749 | strdup( "Error in parsing meta-data file!\n\tboxX unrecognized.\n" ); | 
| 750 | return 0; | 
| 751 | break; | 
| 752 | } | 
| 753 | break; | 
| 754 |  | 
| 755 | case G_BOXY: | 
| 756 | switch( the_type ){ | 
| 757 |  | 
| 758 | case STRING: | 
| 759 | the_event->err_msg = | 
| 760 | strdup( "Error in parsing meta-data file!\n\tboxY is not a double or int.\n" ); | 
| 761 | return 0; | 
| 762 | break; | 
| 763 |  | 
| 764 | case DOUBLE: | 
| 765 | box_y = the_event->evt.asmt.rhs.dval; | 
| 766 | have_box_y = 1; | 
| 767 | return 1; | 
| 768 | break; | 
| 769 |  | 
| 770 | case INT: | 
| 771 | box_y = (double)the_event->evt.asmt.rhs.ival; | 
| 772 | have_box_y = 1; | 
| 773 | return 1; | 
| 774 | break; | 
| 775 |  | 
| 776 | default: | 
| 777 | the_event->err_msg = | 
| 778 | strdup( "Error in parsing meta-data file!\n\tboxY unrecognized.\n" ); | 
| 779 | return 0; | 
| 780 | break; | 
| 781 | } | 
| 782 | break; | 
| 783 |  | 
| 784 | case G_BOXZ: | 
| 785 | switch( the_type ){ | 
| 786 |  | 
| 787 | case STRING: | 
| 788 | the_event->err_msg = | 
| 789 | strdup( "Error in parsing meta-data file!\n\tboxZ is not a double or int.\n" ); | 
| 790 | return 0; | 
| 791 | break; | 
| 792 |  | 
| 793 | case DOUBLE: | 
| 794 | box_z = the_event->evt.asmt.rhs.dval; | 
| 795 | have_box_z = 1; | 
| 796 | return 1; | 
| 797 | break; | 
| 798 |  | 
| 799 | case INT: | 
| 800 | box_z = (double)the_event->evt.asmt.rhs.ival; | 
| 801 | have_box_z = 1; | 
| 802 | return 1; | 
| 803 | break; | 
| 804 |  | 
| 805 | default: | 
| 806 | the_event->err_msg = | 
| 807 | strdup( "Error in parsing meta-data file!\n\tboxZ unrecognized.\n" ); | 
| 808 | return 0; | 
| 809 | break; | 
| 810 | } | 
| 811 | break; | 
| 812 |  | 
| 813 | case G_SAMPLETIME: | 
| 814 | switch( the_type ){ | 
| 815 |  | 
| 816 | case STRING: | 
| 817 | the_event->err_msg = | 
| 818 | strdup( "Error in parsing meta-data file!\n\tsampleTime is not a double or int.\n" ); | 
| 819 | return 0; | 
| 820 | break; | 
| 821 |  | 
| 822 | case DOUBLE: | 
| 823 | sample_time = the_event->evt.asmt.rhs.dval; | 
| 824 | have_sample_time = 1; | 
| 825 | return 1; | 
| 826 | break; | 
| 827 |  | 
| 828 | case INT: | 
| 829 | sample_time = (double)the_event->evt.asmt.rhs.ival; | 
| 830 | have_sample_time = 1; | 
| 831 | return 1; | 
| 832 | break; | 
| 833 |  | 
| 834 | default: | 
| 835 | the_event->err_msg = | 
| 836 | strdup( "Error in parsing meta-data file!\n\tsampleTime unrecognized.\n" ); | 
| 837 | return 0; | 
| 838 | break; | 
| 839 | } | 
| 840 | break; | 
| 841 |  | 
| 842 | case G_STATUSTIME: | 
| 843 | switch( the_type ){ | 
| 844 |  | 
| 845 | case STRING: | 
| 846 | the_event->err_msg = | 
| 847 | strdup( "Error in parsing meta-data file!\n\tstatusTime is not a double or int.\n" ); | 
| 848 | return 0; | 
| 849 | break; | 
| 850 |  | 
| 851 | case DOUBLE: | 
| 852 | status_time = the_event->evt.asmt.rhs.dval; | 
| 853 | have_status_time = 1; | 
| 854 | return 1; | 
| 855 | break; | 
| 856 |  | 
| 857 | case INT: | 
| 858 | status_time = (double)the_event->evt.asmt.rhs.ival; | 
| 859 | have_status_time = 1; | 
| 860 | return 1; | 
| 861 | break; | 
| 862 |  | 
| 863 | default: | 
| 864 | the_event->err_msg = | 
| 865 | strdup( "Error in parsing meta-data file!\n\tstatusTime unrecognized.\n" ); | 
| 866 | return 0; | 
| 867 | break; | 
| 868 | } | 
| 869 | break; | 
| 870 |  | 
| 871 | case G_RESETTIME: | 
| 872 | switch( the_type ){ | 
| 873 |  | 
| 874 | case STRING: | 
| 875 | the_event->err_msg = | 
| 876 | strdup( "Error in parsing meta-data file!\n\tresetTime is not a double or int.\n" ); | 
| 877 | return 0; | 
| 878 | break; | 
| 879 |  | 
| 880 | case DOUBLE: | 
| 881 | resetTime = the_event->evt.asmt.rhs.dval; | 
| 882 | have_reset_time = 1; | 
| 883 | return 1; | 
| 884 | break; | 
| 885 |  | 
| 886 | case INT: | 
| 887 | resetTime = (double)the_event->evt.asmt.rhs.ival; | 
| 888 | have_reset_time = 1; | 
| 889 | return 1; | 
| 890 | break; | 
| 891 |  | 
| 892 | default: | 
| 893 | the_event->err_msg = | 
| 894 | strdup( "Error in parsing meta-data file!\n\tresetTime unrecognized.\n" ); | 
| 895 | return 0; | 
| 896 | break; | 
| 897 | } | 
| 898 | break; | 
| 899 |  | 
| 900 | case G_THERMALTIME: | 
| 901 | switch( the_type ){ | 
| 902 |  | 
| 903 | case STRING: | 
| 904 | the_event->err_msg = | 
| 905 | strdup( "Error in parsing meta-data file!\n\tthermalTime is not a double or int.\n" ); | 
| 906 | return 0; | 
| 907 | break; | 
| 908 |  | 
| 909 | case DOUBLE: | 
| 910 | thermal_time = the_event->evt.asmt.rhs.dval; | 
| 911 | have_thermal_time = 1; | 
| 912 | return 1; | 
| 913 | break; | 
| 914 |  | 
| 915 | case INT: | 
| 916 | thermal_time = (double)the_event->evt.asmt.rhs.ival; | 
| 917 | have_thermal_time = 1; | 
| 918 | return 1; | 
| 919 | break; | 
| 920 |  | 
| 921 | default: | 
| 922 | the_event->err_msg = | 
| 923 | strdup( "Error in parsing meta-data file!\n\tthermalTime unrecognized.\n" ); | 
| 924 | return 0; | 
| 925 | break; | 
| 926 | } | 
| 927 | break; | 
| 928 |  | 
| 929 | case G_RCUT: | 
| 930 | switch( the_type ){ | 
| 931 |  | 
| 932 | case STRING: | 
| 933 | the_event->err_msg = | 
| 934 | strdup( "Error in parsing meta-data file!\n\tcutoffRadius is not a double or int.\n" ); | 
| 935 | return 0; | 
| 936 | break; | 
| 937 |  | 
| 938 | case DOUBLE: | 
| 939 | rcut = the_event->evt.asmt.rhs.dval; | 
| 940 | have_rcut = 1; | 
| 941 | return 1; | 
| 942 | break; | 
| 943 |  | 
| 944 | case INT: | 
| 945 | rcut = (double)the_event->evt.asmt.rhs.ival; | 
| 946 | have_rcut = 1; | 
| 947 | return 1; | 
| 948 | break; | 
| 949 |  | 
| 950 | default: | 
| 951 | the_event->err_msg = | 
| 952 | strdup( "Error in parsing meta-data file!\n\tcutoffRadius unrecognized.\n" ); | 
| 953 | return 0; | 
| 954 | break; | 
| 955 | } | 
| 956 | break; | 
| 957 |  | 
| 958 | case G_RSW: | 
| 959 | switch( the_type ){ | 
| 960 |  | 
| 961 | case STRING: | 
| 962 | the_event->err_msg = | 
| 963 | strdup( "Error in parsing meta-data file!\n\tswitchingRadius is not a double or int.\n" ); | 
| 964 | return 0; | 
| 965 | break; | 
| 966 |  | 
| 967 | case DOUBLE: | 
| 968 | rsw = the_event->evt.asmt.rhs.dval; | 
| 969 | have_rsw = 1; | 
| 970 | return 1; | 
| 971 | break; | 
| 972 |  | 
| 973 | case INT: | 
| 974 | rsw = (double)the_event->evt.asmt.rhs.ival; | 
| 975 | have_rsw = 1; | 
| 976 | return 1; | 
| 977 | break; | 
| 978 |  | 
| 979 | default: | 
| 980 | the_event->err_msg = | 
| 981 | strdup( "Error in parsing meta-data file!\n\tswitchingRadius unrecognized.\n" ); | 
| 982 | return 0; | 
| 983 | break; | 
| 984 | } | 
| 985 | break; | 
| 986 |  | 
| 987 | case G_DIELECTRIC: | 
| 988 | switch( the_type ){ | 
| 989 |  | 
| 990 | case STRING: | 
| 991 | the_event->err_msg = | 
| 992 | strdup( "Error in parsing meta-data file!\n\tdielectric is not a double or int.\n" ); | 
| 993 | return 0; | 
| 994 | break; | 
| 995 |  | 
| 996 | case DOUBLE: | 
| 997 | dielectric = the_event->evt.asmt.rhs.dval; | 
| 998 | have_dielectric = 1; | 
| 999 | return 1; | 
| 1000 | break; | 
| 1001 |  | 
| 1002 | case INT: | 
| 1003 | dielectric = (double)the_event->evt.asmt.rhs.ival; | 
| 1004 | have_dielectric = 1; | 
| 1005 | return 1; | 
| 1006 | break; | 
| 1007 |  | 
| 1008 | default: | 
| 1009 | the_event->err_msg = | 
| 1010 | strdup( "Error in parsing meta-data file!\n\tdielectric unrecognized.\n" ); | 
| 1011 | return 0; | 
| 1012 | break; | 
| 1013 | } | 
| 1014 | break; | 
| 1015 |  | 
| 1016 | case G_TEMPSET: | 
| 1017 | if( the_type == STRING ){ | 
| 1018 |  | 
| 1019 | if( !strcasecmp( "true", the_event->evt.asmt.rhs.sval )) tempSet = 1; | 
| 1020 | else if( !strcasecmp( "false", the_event->evt.asmt.rhs.sval )) tempSet = 0; | 
| 1021 | else{ | 
| 1022 | the_event->err_msg = | 
| 1023 | strdup( "Error in parsing meta-data file!\n\ttempSet was not \"true\" or \"false\".\n" ); | 
| 1024 | return 0; | 
| 1025 | } | 
| 1026 | have_tempSet = 1; | 
| 1027 | return 1; | 
| 1028 | } | 
| 1029 |  | 
| 1030 | the_event->err_msg = | 
| 1031 | strdup( "Error in parsing meta-data file!\n\ttempSet was not \"true\" or \"false\".\n" ); | 
| 1032 | return 0; | 
| 1033 | break; | 
| 1034 |  | 
| 1035 | case G_USEINITTIME: | 
| 1036 | if( the_type == STRING ){ | 
| 1037 |  | 
| 1038 | if( !strcasecmp( "true", the_event->evt.asmt.rhs.sval )) useInitTime = 1; | 
| 1039 | else if( !strcasecmp( "false", the_event->evt.asmt.rhs.sval )) useInitTime = 0; | 
| 1040 | else{ | 
| 1041 | the_event->err_msg = | 
| 1042 | strdup( "Error in parsing meta-data file!\n\tuseInitTime was not \"true\" or \"false\".\n" ); | 
| 1043 | return 0; | 
| 1044 | } | 
| 1045 | return 1; | 
| 1046 | } | 
| 1047 |  | 
| 1048 | the_event->err_msg = | 
| 1049 | strdup( "Error in parsing meta-data file!\n\tuseInitTime was not \"true\" or \"false\".\n" ); | 
| 1050 | return 0; | 
| 1051 | break; | 
| 1052 |  | 
| 1053 | case G_USEINIT_XS_STATE: | 
| 1054 | if( the_type == STRING ){ | 
| 1055 |  | 
| 1056 | if( !strcasecmp( "true", the_event->evt.asmt.rhs.sval )) | 
| 1057 | useInitXSstate = 1; | 
| 1058 | else if( !strcasecmp( "false", the_event->evt.asmt.rhs.sval )) | 
| 1059 | useInitXSstate = 0; | 
| 1060 | else{ | 
| 1061 | the_event->err_msg = | 
| 1062 | strdup( "Error in parsing meta-data file!\n\tuseInitExtendedSystemState was not \"true\" or \"false\".\n" ); | 
| 1063 | return 0; | 
| 1064 | } | 
| 1065 | return 1; | 
| 1066 | } | 
| 1067 |  | 
| 1068 | the_event->err_msg = | 
| 1069 | strdup( "Error in parsing meta-data file!\n\tuseInitExtendedSystemState was not \"true\" or \"false\".\n" ); | 
| 1070 | return 0; | 
| 1071 | break; | 
| 1072 |  | 
| 1073 | case G_USEPBC: | 
| 1074 | if( the_type == STRING ){ | 
| 1075 |  | 
| 1076 | if( !strcasecmp( "true", the_event->evt.asmt.rhs.sval )) usePBC = 1; | 
| 1077 | else if( !strcasecmp( "false", the_event->evt.asmt.rhs.sval )) usePBC = 0; | 
| 1078 | else{ | 
| 1079 | the_event->err_msg = | 
| 1080 | strdup( "Error in parsing meta-data file!\n\tusePeriodicBoundaryConditions was not \"true\" or \"false\".\n" ); | 
| 1081 | return 0; | 
| 1082 | } | 
| 1083 | return 1; | 
| 1084 | } | 
| 1085 |  | 
| 1086 | the_event->err_msg = | 
| 1087 | strdup( "Error in parsing meta-data file!\n\tusePeriodicBoundaryConditions was not \"true\" or \"false\".\n" ); | 
| 1088 | return 0; | 
| 1089 | break; | 
| 1090 |  | 
| 1091 | case G_USERF: | 
| 1092 | if( the_type == STRING ){ | 
| 1093 |  | 
| 1094 | if( !strcasecmp( "true", the_event->evt.asmt.rhs.sval )) useRF = 1; | 
| 1095 | else if( !strcasecmp( "false", the_event->evt.asmt.rhs.sval )) useRF = 0; | 
| 1096 | else{ | 
| 1097 | the_event->err_msg = | 
| 1098 | strdup( "Error in parsing meta-data file!\n\tuseReactionField was not \"true\" or \"false\".\n" ); | 
| 1099 | return 0; | 
| 1100 | } | 
| 1101 | return 1; | 
| 1102 | } | 
| 1103 |  | 
| 1104 | the_event->err_msg = | 
| 1105 | strdup( "Error in parsing meta-data file!\n\tuseReactionField was not \"true\" or \"false\".\n" ); | 
| 1106 | return 0; | 
| 1107 | break; | 
| 1108 |  | 
| 1109 | case G_TARGETPRESSURE: | 
| 1110 | switch( the_type ){ | 
| 1111 |  | 
| 1112 | case STRING: | 
| 1113 | the_event->err_msg = | 
| 1114 | strdup( "Error in parsing meta-data file!\n\ttargetPressure is not a double or int.\n" ); | 
| 1115 | return 0; | 
| 1116 | break; | 
| 1117 |  | 
| 1118 | case DOUBLE: | 
| 1119 | target_pressure = the_event->evt.asmt.rhs.dval; | 
| 1120 | have_target_pressure = 1; | 
| 1121 | return 1; | 
| 1122 | break; | 
| 1123 |  | 
| 1124 | case INT: | 
| 1125 | target_pressure = (double)the_event->evt.asmt.rhs.ival; | 
| 1126 | have_target_pressure = 1; | 
| 1127 | return 1; | 
| 1128 | break; | 
| 1129 |  | 
| 1130 | default: | 
| 1131 | the_event->err_msg = | 
| 1132 | strdup( "Error in parsing meta-data file!\n\ttargetPressure unrecognized.\n" ); | 
| 1133 | return 0; | 
| 1134 | break; | 
| 1135 | } | 
| 1136 | break; | 
| 1137 |  | 
| 1138 | case G_TAUTHERMOSTAT: | 
| 1139 | switch( the_type ){ | 
| 1140 |  | 
| 1141 | case STRING: | 
| 1142 | the_event->err_msg = | 
| 1143 | strdup( "Error in parsing meta-data file!\n\ttauThermostat is not a double or int.\n" ); | 
| 1144 | return 0; | 
| 1145 | break; | 
| 1146 |  | 
| 1147 | case DOUBLE: | 
| 1148 | tau_thermostat = the_event->evt.asmt.rhs.dval; | 
| 1149 | have_tau_thermostat = 1; | 
| 1150 | return 1; | 
| 1151 | break; | 
| 1152 |  | 
| 1153 | case INT: | 
| 1154 | tau_thermostat = (double)the_event->evt.asmt.rhs.ival; | 
| 1155 | have_tau_thermostat = 1; | 
| 1156 | return 1; | 
| 1157 | break; | 
| 1158 |  | 
| 1159 | default: | 
| 1160 | the_event->err_msg = | 
| 1161 | strdup( "Error in parsing meta-data file!\n\ttauThermostat unrecognized.\n" ); | 
| 1162 | return 0; | 
| 1163 | break; | 
| 1164 | } | 
| 1165 | break; | 
| 1166 |  | 
| 1167 | case G_TAUBAROSTAT: | 
| 1168 | switch( the_type ){ | 
| 1169 |  | 
| 1170 | case STRING: | 
| 1171 | the_event->err_msg = | 
| 1172 | strdup( "Error in parsing meta-data file!\n\ttauBarostat is not a double or int.\n" ); | 
| 1173 | return 0; | 
| 1174 | break; | 
| 1175 |  | 
| 1176 | case DOUBLE: | 
| 1177 | tau_barostat = the_event->evt.asmt.rhs.dval; | 
| 1178 | have_tau_barostat = 1; | 
| 1179 | return 1; | 
| 1180 | break; | 
| 1181 |  | 
| 1182 | case INT: | 
| 1183 | tau_barostat = (double)the_event->evt.asmt.rhs.ival; | 
| 1184 | have_tau_barostat = 1; | 
| 1185 | return 1; | 
| 1186 | break; | 
| 1187 |  | 
| 1188 | default: | 
| 1189 | the_event->err_msg = | 
| 1190 | strdup( "Error in parsing meta-data file!\n\ttauBarostat unrecognized.\n" ); | 
| 1191 | return 0; | 
| 1192 | break; | 
| 1193 | } | 
| 1194 | break; | 
| 1195 |  | 
| 1196 | case G_ZCONSTIME: | 
| 1197 | switch( the_type ){ | 
| 1198 |  | 
| 1199 | case STRING: | 
| 1200 | the_event->err_msg = | 
| 1201 | strdup( "Error in parsing meta-data file!\n\tzcons_time is not a double or int.\n" ); | 
| 1202 | return 0; | 
| 1203 | break; | 
| 1204 |  | 
| 1205 | case DOUBLE: | 
| 1206 | zcons_time = the_event->evt.asmt.rhs.dval; | 
| 1207 | have_zcons_time = 1; | 
| 1208 | return 1; | 
| 1209 | break; | 
| 1210 |  | 
| 1211 | case INT: | 
| 1212 | zcons_time = (double)the_event->evt.asmt.rhs.ival; | 
| 1213 | have_zcons_time = 1; | 
| 1214 | return 1; | 
| 1215 | break; | 
| 1216 |  | 
| 1217 | default: | 
| 1218 | the_event->err_msg = | 
| 1219 | strdup( "Error in parsing meta-data file!\n\tzcons_time unrecognized.\n" ); | 
| 1220 | return 0; | 
| 1221 | break; | 
| 1222 | } | 
| 1223 | break; | 
| 1224 |  | 
| 1225 | case G_ZCONSTOL: | 
| 1226 | switch( the_type ){ | 
| 1227 |  | 
| 1228 | case STRING: | 
| 1229 | the_event->err_msg = | 
| 1230 | strdup( "Error in parsing meta-data file!\n\tzcons_tol is not a double or int.\n" ); | 
| 1231 | return 0; | 
| 1232 | break; | 
| 1233 |  | 
| 1234 | case DOUBLE: | 
| 1235 | zcons_tol = the_event->evt.asmt.rhs.dval; | 
| 1236 | have_zcons_tol = 1; | 
| 1237 | return 1; | 
| 1238 | break; | 
| 1239 |  | 
| 1240 | case INT: | 
| 1241 | zcons_tol = (double)the_event->evt.asmt.rhs.ival; | 
| 1242 | have_zcons_tol = 1; | 
| 1243 | return 1; | 
| 1244 | break; | 
| 1245 |  | 
| 1246 | default: | 
| 1247 | the_event->err_msg = | 
| 1248 | strdup( "Error in parsing meta-data file!\n\tzcons_ol unrecognized.\n" ); | 
| 1249 | return 0; | 
| 1250 | break; | 
| 1251 | } | 
| 1252 | break; | 
| 1253 |  | 
| 1254 | case G_ZCONSFORCEPOLICY: | 
| 1255 | switch( the_type ){ | 
| 1256 |  | 
| 1257 | case STRING: | 
| 1258 | strcpy(zconsForcePolicy, the_event->evt.asmt.rhs.sval); | 
| 1259 |  | 
| 1260 | for(int i = 0; zconsForcePolicy[i] != '\0'; i++) | 
| 1261 | { | 
| 1262 | zconsForcePolicy[i] = toupper(zconsForcePolicy[i]); | 
| 1263 | } | 
| 1264 | have_zcons_force_policy = 1; | 
| 1265 | return 1; | 
| 1266 | break; | 
| 1267 |  | 
| 1268 | case DOUBLE: | 
| 1269 | the_event->err_msg = | 
| 1270 | strdup( "Error in parsing meta-data file!\n\tzconsForcePolicy is not a double or int.\n" ); | 
| 1271 | return 0; | 
| 1272 | break; | 
| 1273 |  | 
| 1274 | case INT: | 
| 1275 | the_event->err_msg = | 
| 1276 | strdup( "Error in parsing meta-data file!\n\tzconsForcePolicy is not a double or int.\n" ); | 
| 1277 | return 0; | 
| 1278 | break; | 
| 1279 |  | 
| 1280 | default: | 
| 1281 | the_event->err_msg = | 
| 1282 | strdup( "Error in parsing meta-data file!\n\tzconsForcePolicy unrecognized.\n" ); | 
| 1283 | return 0; | 
| 1284 | break; | 
| 1285 | } | 
| 1286 | break; | 
| 1287 |  | 
| 1288 | case G_ZCONSGAP: | 
| 1289 | switch( the_type ){ | 
| 1290 |  | 
| 1291 | case STRING: | 
| 1292 | the_event->err_msg = | 
| 1293 | strdup( "Error in parsing meta-data file!\n\tzcons_gap is not a double or int.\n" ); | 
| 1294 | return 0; | 
| 1295 | break; | 
| 1296 |  | 
| 1297 | case DOUBLE: | 
| 1298 | zcons_gap = the_event->evt.asmt.rhs.dval; | 
| 1299 | have_zcons_gap= 1; | 
| 1300 | return 1; | 
| 1301 | break; | 
| 1302 |  | 
| 1303 | case INT: | 
| 1304 | zcons_gap= (double)the_event->evt.asmt.rhs.ival; | 
| 1305 | have_zcons_gap= 1; | 
| 1306 | return 1; | 
| 1307 | break; | 
| 1308 |  | 
| 1309 | default: | 
| 1310 | the_event->err_msg = | 
| 1311 | strdup( "Error in parsing meta-data file!\n\tzcons_gap unrecognized.\n" ); | 
| 1312 | return 0; | 
| 1313 | break; | 
| 1314 | } | 
| 1315 | break; | 
| 1316 |  | 
| 1317 | case G_ZCONSFIXTIME: | 
| 1318 | switch( the_type ){ | 
| 1319 |  | 
| 1320 | case STRING: | 
| 1321 | the_event->err_msg = | 
| 1322 | strdup( "Error in parsing meta-data file!\n\tzcons_fixtime is not a double or int.\n" ); | 
| 1323 | return 0; | 
| 1324 | break; | 
| 1325 |  | 
| 1326 | case DOUBLE: | 
| 1327 | zcons_fixtime= the_event->evt.asmt.rhs.dval; | 
| 1328 | have_zcons_fixtime= 1; | 
| 1329 | return 1; | 
| 1330 | break; | 
| 1331 |  | 
| 1332 | case INT: | 
| 1333 | zcons_fixtime= (double)the_event->evt.asmt.rhs.ival; | 
| 1334 | have_zcons_fixtime= 1; | 
| 1335 | return 1; | 
| 1336 | break; | 
| 1337 |  | 
| 1338 | default: | 
| 1339 | the_event->err_msg = | 
| 1340 | strdup( "Error in parsing meta-data file!\n\tzcons_fixtime unrecognized.\n" ); | 
| 1341 | return 0; | 
| 1342 | break; | 
| 1343 | } | 
| 1344 | break; | 
| 1345 |  | 
| 1346 | case G_ZCONSUSINGSMD: | 
| 1347 | switch( the_type ){ | 
| 1348 |  | 
| 1349 | case STRING: | 
| 1350 | the_event->err_msg = | 
| 1351 | strdup( "Error in parsing meta-data file!\n\tzcons_fixtime is not an  int.\n" ); | 
| 1352 | return 0; | 
| 1353 | break; | 
| 1354 |  | 
| 1355 | case DOUBLE: | 
| 1356 | the_event->err_msg = | 
| 1357 | strdup( "Error in parsing meta-data file!\n\tzcons_fixtime is not an  int.\n" ); | 
| 1358 | return 0; | 
| 1359 | break; | 
| 1360 |  | 
| 1361 | case INT: | 
| 1362 | zcons_using_smd= the_event->evt.asmt.rhs.ival; | 
| 1363 | have_zcons_using_smd= 1; | 
| 1364 | return 1; | 
| 1365 | break; | 
| 1366 |  | 
| 1367 | default: | 
| 1368 | the_event->err_msg = | 
| 1369 | strdup( "Error in parsing meta-data file!\n\tzcons_usingsmd unrecognized.\n" ); | 
| 1370 | return 0; | 
| 1371 | break; | 
| 1372 | } | 
| 1373 | break; | 
| 1374 |  | 
| 1375 | case G_MINIMIZER: | 
| 1376 | switch( the_type ){ | 
| 1377 |  | 
| 1378 | case STRING: | 
| 1379 | strcpy(minimizer_name, the_event->evt.asmt.rhs.sval); | 
| 1380 |  | 
| 1381 | for(int i = 0; zconsForcePolicy[i] != '\0'; i++){ | 
| 1382 | zconsForcePolicy[i] = toupper(zconsForcePolicy[i]); | 
| 1383 | } | 
| 1384 | have_minimizer= 1; | 
| 1385 | return 1; | 
| 1386 | break; | 
| 1387 |  | 
| 1388 | case DOUBLE: | 
| 1389 | the_event->err_msg = | 
| 1390 | strdup( "Error in parsing meta-data file!\n\tminimizer_name is not a double or int.\n" ); | 
| 1391 | return 0; | 
| 1392 | break; | 
| 1393 |  | 
| 1394 | case INT: | 
| 1395 | the_event->err_msg = | 
| 1396 | strdup( "Error in parsing meta-data file!\n\tminimizer_name is not a double or int.\n" ); | 
| 1397 | return 0; | 
| 1398 | break; | 
| 1399 |  | 
| 1400 | default: | 
| 1401 | the_event->err_msg = | 
| 1402 | strdup( "Error in parsing meta-data file!\n\tminimizer_name unrecognized.\n" ); | 
| 1403 | return 0; | 
| 1404 | break; | 
| 1405 | } | 
| 1406 | break; | 
| 1407 |  | 
| 1408 | case G_MIN_MAXITER: | 
| 1409 | switch( the_type ){ | 
| 1410 |  | 
| 1411 | case STRING: | 
| 1412 | the_event->err_msg = | 
| 1413 | strdup( "Error in parsing meta-data file!\n\tminimizer_maxiteration is not a double or int.\n" ); | 
| 1414 | return 1; | 
| 1415 | break; | 
| 1416 |  | 
| 1417 | case DOUBLE: | 
| 1418 | minimizer_maxiteration = (int)the_event->evt.asmt.rhs.dval; | 
| 1419 | have_minimizer_maxiteration = 1; | 
| 1420 | return 1; | 
| 1421 | break; | 
| 1422 |  | 
| 1423 | case INT: | 
| 1424 | minimizer_maxiteration = the_event->evt.asmt.rhs.ival; | 
| 1425 | have_minimizer_maxiteration = 1; | 
| 1426 | return 1; | 
| 1427 | break; | 
| 1428 |  | 
| 1429 | default: | 
| 1430 | the_event->err_msg = | 
| 1431 | strdup( "Error in parsing meta-data file!\n\tminimizer_maxiteration unrecognized.\n" ); | 
| 1432 | return 0; | 
| 1433 | break; | 
| 1434 | } | 
| 1435 | break; | 
| 1436 |  | 
| 1437 | case G_MIN_WRITEFRQ: | 
| 1438 | switch( the_type ){ | 
| 1439 |  | 
| 1440 | case STRING: | 
| 1441 | the_event->err_msg = | 
| 1442 | strdup( "Error in parsing meta-data file!\n\tminimizer_writefrq is not an int.\n" ); | 
| 1443 | return 1; | 
| 1444 | break; | 
| 1445 |  | 
| 1446 | case DOUBLE: | 
| 1447 | the_event->err_msg = | 
| 1448 | strdup( "Error in parsing meta-data file!\n\tminimizer_writefrq is not an  int.\n" ); | 
| 1449 | return 1; | 
| 1450 | break; | 
| 1451 |  | 
| 1452 | case INT: | 
| 1453 | minimizer_writefrq= the_event->evt.asmt.rhs.ival; | 
| 1454 | have_minimizer_writefrq = 1; | 
| 1455 | return 1; | 
| 1456 | break; | 
| 1457 |  | 
| 1458 | default: | 
| 1459 | the_event->err_msg = | 
| 1460 | strdup( "Error in parsing meta-data file!\n\tminimizer_writefrq unrecognized.\n" ); | 
| 1461 | return 0; | 
| 1462 | break; | 
| 1463 | } | 
| 1464 | break; | 
| 1465 |  | 
| 1466 | case G_MIN_STEPSIZE: | 
| 1467 | switch( the_type ){ | 
| 1468 |  | 
| 1469 | case STRING: | 
| 1470 | the_event->err_msg = | 
| 1471 | strdup( "Error in parsing meta-data file!\n\tminimizer_resetfrq is not a double or int.\n" ); | 
| 1472 | return 1; | 
| 1473 | break; | 
| 1474 |  | 
| 1475 | case DOUBLE: | 
| 1476 | minimizer_stepsize= the_event->evt.asmt.rhs.dval; | 
| 1477 | have_minimizer_stepsize = 1; | 
| 1478 | return 1; | 
| 1479 | break; | 
| 1480 |  | 
| 1481 | case INT: | 
| 1482 | minimizer_stepsize= the_event->evt.asmt.rhs.ival; | 
| 1483 | have_minimizer_stepsize = 1; | 
| 1484 | return 1; | 
| 1485 | break; | 
| 1486 |  | 
| 1487 | default: | 
| 1488 | the_event->err_msg = | 
| 1489 | strdup( "Error in parsing meta-data file!\n\tminimizer_resetfrq unrecognized.\n" ); | 
| 1490 | return 0; | 
| 1491 | break; | 
| 1492 | } | 
| 1493 | break; | 
| 1494 |  | 
| 1495 | case G_MIN_FTOL: | 
| 1496 | switch( the_type ){ | 
| 1497 |  | 
| 1498 | case STRING: | 
| 1499 | the_event->err_msg = | 
| 1500 | strdup( "Error in parsing meta-data file!\n\tminimizer_ftol is not a double or int.\n" ); | 
| 1501 | return 1; | 
| 1502 | break; | 
| 1503 |  | 
| 1504 | case DOUBLE: | 
| 1505 | minimizer_ftol= the_event->evt.asmt.rhs.dval; | 
| 1506 | have_minimizer_ftol = 1; | 
| 1507 | return 1; | 
| 1508 | break; | 
| 1509 |  | 
| 1510 | case INT: | 
| 1511 | minimizer_ftol= the_event->evt.asmt.rhs.ival; | 
| 1512 | have_minimizer_ftol = 1; | 
| 1513 | return 1; | 
| 1514 | break; | 
| 1515 |  | 
| 1516 | default: | 
| 1517 | the_event->err_msg = | 
| 1518 | strdup( "Error in parsing meta-data file!\n\tminimizer_ftol unrecognized.\n" ); | 
| 1519 | return 0; | 
| 1520 | break; | 
| 1521 | } | 
| 1522 | break; | 
| 1523 |  | 
| 1524 | case G_MIN_GTOL: | 
| 1525 | switch( the_type ){ | 
| 1526 |  | 
| 1527 | case STRING: | 
| 1528 | the_event->err_msg = | 
| 1529 | strdup( "Error in parsing meta-data file!\n\tminimizer_gtol is not a double or int.\n" ); | 
| 1530 | return 1; | 
| 1531 | break; | 
| 1532 |  | 
| 1533 | case DOUBLE: | 
| 1534 | minimizer_gtol= the_event->evt.asmt.rhs.dval; | 
| 1535 | have_minimizer_gtol = 1; | 
| 1536 | return 1; | 
| 1537 | break; | 
| 1538 |  | 
| 1539 | case INT: | 
| 1540 | minimizer_gtol= the_event->evt.asmt.rhs.ival; | 
| 1541 | have_minimizer_gtol = 1; | 
| 1542 | return 1; | 
| 1543 | break; | 
| 1544 |  | 
| 1545 | default: | 
| 1546 | the_event->err_msg = | 
| 1547 | strdup( "Error in parsing meta-data file!\n\tminimizer_gtol unrecognized.\n" ); | 
| 1548 | return 0; | 
| 1549 | break; | 
| 1550 | } | 
| 1551 | break; | 
| 1552 |  | 
| 1553 | case G_MIN_LSMAXITER: | 
| 1554 | switch( the_type ){ | 
| 1555 |  | 
| 1556 | case STRING: | 
| 1557 | the_event->err_msg = | 
| 1558 | strdup( "Error in parsing meta-data file!\n\tminimizer_ls_maxiteration is not an int.\n" ); | 
| 1559 | return 1; | 
| 1560 | break; | 
| 1561 |  | 
| 1562 | case DOUBLE: | 
| 1563 | the_event->err_msg = | 
| 1564 | strdup( "Error in parsing meta-data file!\n\tminimizer_ls_maxiteration is not an int.\n" ); | 
| 1565 | return 1; | 
| 1566 | break; | 
| 1567 |  | 
| 1568 | case INT: | 
| 1569 | minimizer_ls_maxiteration = the_event->evt.asmt.rhs.ival; | 
| 1570 | have_minimizer_ls_maxiteration = 1; | 
| 1571 | return 1; | 
| 1572 | break; | 
| 1573 |  | 
| 1574 | default: | 
| 1575 | the_event->err_msg = | 
| 1576 | strdup( "Error in parsing meta-data file!\n\tminimizer_ls_maxiteration unrecognized.\n" ); | 
| 1577 | return 0; | 
| 1578 | break; | 
| 1579 | } | 
| 1580 | break; | 
| 1581 |  | 
| 1582 | case G_MIN_LSTOL: | 
| 1583 | switch( the_type ){ | 
| 1584 |  | 
| 1585 | case STRING: | 
| 1586 | the_event->err_msg = | 
| 1587 | strdup( "Error in parsing meta-data file!\n\tminimizer_ls_tol is not a double or int.\n" ); | 
| 1588 | return 1; | 
| 1589 | break; | 
| 1590 |  | 
| 1591 | case DOUBLE: | 
| 1592 | minimizer_ls_tol= the_event->evt.asmt.rhs.dval; | 
| 1593 | have_minimizer_ls_tol = 1; | 
| 1594 | return 1; | 
| 1595 | break; | 
| 1596 |  | 
| 1597 | case INT: | 
| 1598 | minimizer_ls_tol= the_event->evt.asmt.rhs.ival; | 
| 1599 | have_minimizer_ls_tol = 1; | 
| 1600 | return 1; | 
| 1601 | break; | 
| 1602 |  | 
| 1603 | default: | 
| 1604 | the_event->err_msg = | 
| 1605 | strdup( "Error in parsing meta-data file!\n\tminimizer_ls_tol unrecognized.\n" ); | 
| 1606 | return 0; | 
| 1607 | break; | 
| 1608 | } | 
| 1609 | break; | 
| 1610 |  | 
| 1611 | // add more token cases here. | 
| 1612 | case G_SEED: | 
| 1613 | switch( the_type ){ | 
| 1614 |  | 
| 1615 | case STRING: | 
| 1616 | the_event->err_msg = | 
| 1617 | strdup( "Error in parsing meta-data file!\n\tseed is not a string.\n" ); | 
| 1618 | return 0; | 
| 1619 | return 0; | 
| 1620 | break; | 
| 1621 |  | 
| 1622 | case DOUBLE: | 
| 1623 | have_seed = 1; | 
| 1624 | seed = (int)the_event->evt.asmt.rhs.dval; | 
| 1625 | return 1; | 
| 1626 | break; | 
| 1627 |  | 
| 1628 | case INT: | 
| 1629 | have_seed = 1; | 
| 1630 | seed =  the_event->evt.asmt.rhs.ival ; | 
| 1631 | return 1; | 
| 1632 | break; | 
| 1633 |  | 
| 1634 | default: | 
| 1635 | the_event->err_msg = | 
| 1636 | strdup( "Error in parsing meta-data file!\n\tseed unrecognized.\n" ); | 
| 1637 | return 0; | 
| 1638 | break; | 
| 1639 | } | 
| 1640 | break; | 
| 1641 |  | 
| 1642 | case G_USE_SOLID_THERM_INT: | 
| 1643 | if( the_type == STRING ){ | 
| 1644 |  | 
| 1645 | if( !strcasecmp( "true", the_event->evt.asmt.rhs.sval )) useSolidThermInt = 1; | 
| 1646 | else if( !strcasecmp( "false", the_event->evt.asmt.rhs.sval )) useSolidThermInt = 0; | 
| 1647 | else{ | 
| 1648 | the_event->err_msg = | 
| 1649 | strdup( "Error in parsing meta-data file!\n\tuseSolidThermInt was not \"true\" or \"false\".\n" ); | 
| 1650 | return 0; | 
| 1651 | } | 
| 1652 | return 1; | 
| 1653 | } | 
| 1654 |  | 
| 1655 | the_event->err_msg = | 
| 1656 | strdup( "Error in parsing meta-data file!\n\tuseSolidThermInt was not \"true\" or \"false\".\n" ); | 
| 1657 | return 0; | 
| 1658 | break; | 
| 1659 |  | 
| 1660 | case G_USE_LIQUID_THERM_INT: | 
| 1661 | if( the_type == STRING ){ | 
| 1662 |  | 
| 1663 | if( !strcasecmp( "true", the_event->evt.asmt.rhs.sval )) useLiquidThermInt = 1; | 
| 1664 | else if( !strcasecmp( "false", the_event->evt.asmt.rhs.sval )) useLiquidThermInt = 0; | 
| 1665 | else{ | 
| 1666 | the_event->err_msg = | 
| 1667 | strdup( "Error in parsing meta-data file!\n\tuseLiquidThermInt was not \"true\" or \"false\".\n" ); | 
| 1668 | return 0; | 
| 1669 | } | 
| 1670 | return 1; | 
| 1671 | } | 
| 1672 |  | 
| 1673 | the_event->err_msg = | 
| 1674 | strdup( "Error in parsing meta-data file!\n\tuseLiquidThermInt was not \"true\" or \"false\".\n" ); | 
| 1675 | return 0; | 
| 1676 | break; | 
| 1677 |  | 
| 1678 | case G_THERM_INT_LAMBDA: | 
| 1679 | switch( the_type ){ | 
| 1680 |  | 
| 1681 | case STRING: | 
| 1682 | the_event->err_msg = | 
| 1683 | strdup( "Error in parsing meta-data file!\n\tthermodynamicIntegrationLambda is not a double or int.\n" ); | 
| 1684 | return 1; | 
| 1685 | break; | 
| 1686 |  | 
| 1687 | case DOUBLE: | 
| 1688 | thermodynamic_integration_lambda = the_event->evt.asmt.rhs.dval; | 
| 1689 | have_thermodynamic_integration_lambda = 1; | 
| 1690 | return 1; | 
| 1691 | break; | 
| 1692 |  | 
| 1693 | case INT: | 
| 1694 | thermodynamic_integration_lambda = (double)the_event->evt.asmt.rhs.dval; | 
| 1695 | have_thermodynamic_integration_lambda = 1; | 
| 1696 | return 1; | 
| 1697 | break; | 
| 1698 |  | 
| 1699 | default: | 
| 1700 | the_event->err_msg = | 
| 1701 | strdup( "Error in parsing meta-data file!\n\tthermodynamicIntegrationLambda unrecognized.\n" ); | 
| 1702 | return 0; | 
| 1703 | break; | 
| 1704 | } | 
| 1705 | break; | 
| 1706 |  | 
| 1707 | case G_THERM_INT_K: | 
| 1708 | switch( the_type ){ | 
| 1709 |  | 
| 1710 | case STRING: | 
| 1711 | the_event->err_msg = | 
| 1712 | strdup( "Error in parsing meta-data file!\n\tthermodynamicIntegrationK is not a double or int.\n" ); | 
| 1713 | return 1; | 
| 1714 | break; | 
| 1715 |  | 
| 1716 | case DOUBLE: | 
| 1717 | thermodynamic_integration_k = the_event->evt.asmt.rhs.dval; | 
| 1718 | have_thermodynamic_integration_k = 1; | 
| 1719 | return 1; | 
| 1720 | break; | 
| 1721 |  | 
| 1722 | case INT: | 
| 1723 | thermodynamic_integration_k = (double)the_event->evt.asmt.rhs.dval; | 
| 1724 | have_thermodynamic_integration_k = 1; | 
| 1725 | return 1; | 
| 1726 | break; | 
| 1727 |  | 
| 1728 | default: | 
| 1729 | the_event->err_msg = | 
| 1730 | strdup( "Error in parsing meta-data file!\n\tthermodynamicIntegrationK unrecognized.\n" ); | 
| 1731 | return 0; | 
| 1732 | break; | 
| 1733 | } | 
| 1734 | break; | 
| 1735 |  | 
| 1736 | case G_FORCEFIELD_VARIANT: | 
| 1737 | if( the_type == STRING ){ | 
| 1738 | strcpy( forcefield_variant, the_event->evt.asmt.rhs.sval ); | 
| 1739 | have_forcefield_variant = 1; | 
| 1740 | return 1; | 
| 1741 | } | 
| 1742 |  | 
| 1743 | the_event->err_msg = | 
| 1744 | strdup( "Error in parsing meta-data file!\n\tforceFieldVariant was not a string assignment.\n" ); | 
| 1745 | return 0; | 
| 1746 | break; | 
| 1747 | // add more token cases here. | 
| 1748 |  | 
| 1749 | case G_FORCEFIELD_FILENAME: | 
| 1750 | if( the_type == STRING ){ | 
| 1751 | strcpy( forcefield_filename, the_event->evt.asmt.rhs.sval ); | 
| 1752 | have_forcefield_filename = 1; | 
| 1753 | return 1; | 
| 1754 | } | 
| 1755 |  | 
| 1756 | the_event->err_msg = | 
| 1757 | strdup( "Error in parsing meta-data file!\n\tforceFieldFileName was not a string assignment.\n" ); | 
| 1758 | return 0; | 
| 1759 | break; | 
| 1760 |  | 
| 1761 | case G_THERM_INT_DIST_SPRING: | 
| 1762 | switch( the_type ){ | 
| 1763 |  | 
| 1764 | case STRING: | 
| 1765 | the_event->err_msg = | 
| 1766 | strdup( "Error in parsing meta-data file!\n\tthermIntDistSpringConst is not a double or int.\n" ); | 
| 1767 | return 1; | 
| 1768 | break; | 
| 1769 |  | 
| 1770 | case DOUBLE: | 
| 1771 | therm_int_dist_spring = the_event->evt.asmt.rhs.dval; | 
| 1772 | have_dist_spring_constant = 1; | 
| 1773 | return 1; | 
| 1774 | break; | 
| 1775 |  | 
| 1776 | case INT: | 
| 1777 | therm_int_dist_spring = (double)the_event->evt.asmt.rhs.dval; | 
| 1778 | have_dist_spring_constant = 1; | 
| 1779 | return 1; | 
| 1780 | break; | 
| 1781 |  | 
| 1782 | default: | 
| 1783 | the_event->err_msg = | 
| 1784 | strdup( "Error in parsing meta-data file!\n\tthermIntDistSpringConst unrecognized.\n" ); | 
| 1785 | return 0; | 
| 1786 | break; | 
| 1787 | } | 
| 1788 | break; | 
| 1789 |  | 
| 1790 | case G_THERM_INT_THETA_SPRING: | 
| 1791 | switch( the_type ){ | 
| 1792 |  | 
| 1793 | case STRING: | 
| 1794 | the_event->err_msg = | 
| 1795 | strdup( "Error in parsing meta-data file!\n\tthermIntThetaSpringConst is not a double or int.\n" ); | 
| 1796 | return 1; | 
| 1797 | break; | 
| 1798 |  | 
| 1799 | case DOUBLE: | 
| 1800 | therm_int_theta_spring = the_event->evt.asmt.rhs.dval; | 
| 1801 | have_theta_spring_constant = 1; | 
| 1802 | return 1; | 
| 1803 | break; | 
| 1804 |  | 
| 1805 | case INT: | 
| 1806 | therm_int_theta_spring = (double)the_event->evt.asmt.rhs.dval; | 
| 1807 | have_theta_spring_constant = 1; | 
| 1808 | return 1; | 
| 1809 | break; | 
| 1810 |  | 
| 1811 | default: | 
| 1812 | the_event->err_msg = | 
| 1813 | strdup( "Error in parsing meta-data file!\n\tthermIntThetaSpringConst unrecognized.\n" ); | 
| 1814 | return 0; | 
| 1815 | break; | 
| 1816 | } | 
| 1817 | break; | 
| 1818 |  | 
| 1819 | case G_THERM_INT_OMEGA_SPRING: | 
| 1820 | switch( the_type ){ | 
| 1821 |  | 
| 1822 | case STRING: | 
| 1823 | the_event->err_msg = | 
| 1824 | strdup( "Error in parsing meta-data file!\n\tthermIntOmegaSpringConst is not a double or int.\n" ); | 
| 1825 | return 1; | 
| 1826 | break; | 
| 1827 |  | 
| 1828 | case DOUBLE: | 
| 1829 | therm_int_omega_spring = the_event->evt.asmt.rhs.dval; | 
| 1830 | have_omega_spring_constant = 1; | 
| 1831 | return 1; | 
| 1832 | break; | 
| 1833 |  | 
| 1834 | case INT: | 
| 1835 | therm_int_omega_spring = (double)the_event->evt.asmt.rhs.dval; | 
| 1836 | have_omega_spring_constant = 1; | 
| 1837 | return 1; | 
| 1838 | break; | 
| 1839 |  | 
| 1840 | default: | 
| 1841 | the_event->err_msg = | 
| 1842 | strdup( "Error in parsing meta-data file!\n\tthermIntOmegaSpringConst unrecognized.\n" ); | 
| 1843 | return 0; | 
| 1844 | break; | 
| 1845 | } | 
| 1846 | break; | 
| 1847 |  | 
| 1848 | case G_SURFACETENSION: | 
| 1849 | switch( the_type ){ | 
| 1850 |  | 
| 1851 | case STRING: | 
| 1852 | the_event->err_msg = | 
| 1853 | strdup( "Error in parsing meta-data file!\n\tsurfaceTension is not a double or int.\n" ); | 
| 1854 | return 1; | 
| 1855 | break; | 
| 1856 |  | 
| 1857 | case DOUBLE: | 
| 1858 | surface_tension= the_event->evt.asmt.rhs.dval; | 
| 1859 | have_surface_tension = 1; | 
| 1860 | return 1; | 
| 1861 | break; | 
| 1862 |  | 
| 1863 | case INT: | 
| 1864 | surface_tension = (double)the_event->evt.asmt.rhs.dval; | 
| 1865 | have_surface_tension = 1; | 
| 1866 | return 1; | 
| 1867 | break; | 
| 1868 |  | 
| 1869 | default: | 
| 1870 | the_event->err_msg = | 
| 1871 | strdup( "Error in parsing meta-data file!\n\tsurfaceTension unrecognized.\n" ); | 
| 1872 | return 0; | 
| 1873 | break; | 
| 1874 | } | 
| 1875 | break; | 
| 1876 |  | 
| 1877 | case G_PRINTPREESURETENSOR: | 
| 1878 | if( the_type == STRING ){ | 
| 1879 |  | 
| 1880 | if( !strcasecmp( "true", the_event->evt.asmt.rhs.sval )) { | 
| 1881 | have_print_pressure_tensor= 1; | 
| 1882 | print_pressure_tensor = 1; | 
| 1883 | } else if( !strcasecmp( "false", the_event->evt.asmt.rhs.sval )) { | 
| 1884 | have_print_pressure_tensor= 1; | 
| 1885 | print_pressure_tensor = 0; | 
| 1886 | } else{ | 
| 1887 | the_event->err_msg = | 
| 1888 | strdup( "Error in parsing meta-data file!\n\tprintPressureTensor was not \"true\" or \"false\".\n" ); | 
| 1889 | return 0; | 
| 1890 | } | 
| 1891 | return 1; | 
| 1892 | } | 
| 1893 |  | 
| 1894 | the_event->err_msg = | 
| 1895 | strdup( "Error in parsing meta-data file!\n\tprintPressureTensor was not \"true\" or \"false\".\n" ); | 
| 1896 | return 0; | 
| 1897 | break; | 
| 1898 |  | 
| 1899 |  | 
| 1900 |  | 
| 1901 |  | 
| 1902 | // add more token cases here. | 
| 1903 | } | 
| 1904 | } | 
| 1905 |  | 
| 1906 | switch( the_type ){ | 
| 1907 |  | 
| 1908 | case STRING: | 
| 1909 | sprintf( err, | 
| 1910 | "\tUnrecognized assignment:\n" | 
| 1911 | "\t\t-> %s = %s\n", | 
| 1912 | lhs, the_event->evt.asmt.rhs.sval ); | 
| 1913 | break; | 
| 1914 |  | 
| 1915 | case DOUBLE: | 
| 1916 | sprintf( err, | 
| 1917 | "\tUnrecognized assignment:\n" | 
| 1918 | "\t\t-> %s = %lf\n", | 
| 1919 | lhs, the_event->evt.asmt.rhs.dval ); | 
| 1920 | break; | 
| 1921 |  | 
| 1922 | case INT: | 
| 1923 | sprintf( err, | 
| 1924 | "\tUnrecognized assignment:\n" | 
| 1925 | "\t\t-> %s = %d\n", | 
| 1926 | lhs, the_event->evt.asmt.rhs.ival ); | 
| 1927 | break; | 
| 1928 |  | 
| 1929 | default: | 
| 1930 | sprintf( err, | 
| 1931 | "\tUnrecognized assignment:\n" | 
| 1932 | "\t\t-> %s = ?\n", | 
| 1933 | lhs ); | 
| 1934 | break; | 
| 1935 | } | 
| 1936 |  | 
| 1937 | the_event->err_msg = strdup( err ); | 
| 1938 | return 0; | 
| 1939 | } | 
| 1940 |  | 
| 1941 | char* Globals::checkMe( void ){ | 
| 1942 |  | 
| 1943 | char err[300]; | 
| 1944 | short int have_err = 0; | 
| 1945 |  | 
| 1946 | strcpy( err, "The following required keywords are missing:\n" ); | 
| 1947 |  | 
| 1948 | if( !have_force_field ){ | 
| 1949 | strcat( err, "\t\t->forceField\n" ); | 
| 1950 | have_err= 1; | 
| 1951 | } | 
| 1952 |  | 
| 1953 | if( !have_n_components ){ | 
| 1954 | strcat( err, "\t\t->nComponents\n" ); | 
| 1955 | have_err= 1; | 
| 1956 | } | 
| 1957 |  | 
| 1958 |  | 
| 1959 | if ( !have_ensemble ) { | 
| 1960 | // I'm not doing MD: | 
| 1961 | if ( !have_minimizer ) { | 
| 1962 | // I'm not doing MD or minimization: | 
| 1963 | strcat( err, "\t\t->either ensemble or minimizer must be set!\n" ); | 
| 1964 | have_err = 1; | 
| 1965 | } else { | 
| 1966 | // I'm a minimizer: | 
| 1967 | } | 
| 1968 | } else { | 
| 1969 | // I *am* doing MD: | 
| 1970 | if( !have_dt ){ | 
| 1971 | strcat( err, "\t\t->dt (timestep in fs)\n" ); | 
| 1972 | have_err= 1; | 
| 1973 | } | 
| 1974 | if( !have_run_time ){ | 
| 1975 | strcat( err, "\t\t->runTime (total run time in fs)\n" ); | 
| 1976 | have_err= 1; | 
| 1977 | } | 
| 1978 | } | 
| 1979 |  | 
| 1980 | if( have_err ) return strdup( err ); | 
| 1981 |  | 
| 1982 | return NULL; | 
| 1983 | } | 
| 1984 |  | 
| 1985 | int Globals::globalEnd( event* the_event ){ | 
| 1986 |  | 
| 1987 | the_event->err_msg = checkMe(); | 
| 1988 | if( the_event->err_msg != NULL ) return 0; | 
| 1989 |  | 
| 1990 | return 1; | 
| 1991 | } | 
| 1992 |  |